Scon004178.2
Basic Information
- Insect
- Synergus coniferae
- Gene Symbol
- Hivep1
- Assembly
- GCA_032164275.1
- Location
- JAUEJJ010000013.1:13503126-13515494[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0002 0.025 15.6 1.2 1 23 123 145 123 145 0.98 2 9 0.032 4 8.7 2.8 1 21 151 171 151 175 0.86 3 9 0.00022 0.028 15.5 0.4 1 21 376 396 376 397 0.95 4 9 2.2e-05 0.0028 18.6 2.6 1 23 1049 1071 1049 1071 0.99 5 9 4.6e-06 0.00058 20.8 4.5 1 23 1077 1101 1077 1101 0.92 6 9 0.027 3.4 8.9 0.6 2 23 1764 1784 1763 1788 0.88 7 9 0.00022 0.028 15.5 1.6 1 23 1794 1818 1794 1818 0.93 8 9 0.0033 0.42 11.8 2.8 1 23 1839 1863 1839 1863 0.93 9 9 8.6 1.1e+03 1.1 0.6 2 23 1980 2002 1979 2002 0.87
Sequence Information
- Coding Sequence
- ATGAGAGTGAAGAGTGGAGGAAAAGTATCCTCGTCACTCGTCAGACGCGCACGCCAAGCCAAGCCACCACGCGTGACTCACTTGCCAGTAGTTGTCCTGAAAGAGACGCATACTGTGGCGATGACAGACCCGCAGTTGACgaacaacaacaacaataacGATGGCGAGCCAAAGTAcctgcataaaaaatttaagaaggTGGCATCGACAGAGACCGCGAACAAGGTGGAGACTAAAAAAGAGTCTCCTCCAGCAGAAGTCCCTCCTCCAGAGACTCCGAAGAAAAAAGCCGTCAAGGAGGTAGCAGCCAAAGTCGAATCTGTTCAGGAAGCAGAAAGTGAACCCACCGAGTCCAAAAAGGCCGGATATGTTTGTACTTACTGCAAACTTTCGTGTGCCAAGCCCAGTGTGCTTCAAAAACACATCAGGGCTCACACAAATGAAAGACCCTACCCCTGTGTTCCTTGCGGCTTTGCTTTTAAAACGAAGTCTAATCTGTATAAACACTGCAGGTCTCGGACCCACGCTCTTAAAACGGAAAGCGGCGATTCCAGCAAGGTTTCTGAAGATTCAGACATTAGTTTATCAGATAGCGCCAGCAATGGAACGGGAACACCACCTCCACCTCCGTCGTCGACTCCAAGTTCGACAGTGAGTACAAAGACTGTAAAGACTGGAAAGATATACAAGCCCAAGTTCCACACCGCCCTCCAAAATGCGAGCAACGAGACTGAGACGTCTTCCCTGTCTTCCAATTCCTCCAGCAGCTCCTGTTCCTCAAGTACCTTGACTGCGACGCCCAATAGCGTCAAACCAAATGCGGAGCAGCTGCAGGAACACatagataaaattataacCGCCAACCAAGCAATTGTCGACGCAGTCGATCCACGACTCCACAAACTGATGCAAAGACAACAAAGTCTAGTAGAAACAAAACCAACTGAACAGCCTCTGAACCTCTCATCCGGTGACGAGGCTTCCGTCCGTAAAAGATGTTACAGTGAAAGTTTCGCCCAAGAAGGCAAGGACCATCTTCCTAACTCTGATGGTTCCATCATCAAGGATCTCCTCCTGAAGACTGTTCGCCCCTCTAATCAGGAACAAAACCTAGGAGTTGACAACTTCATGTGTCCCTTTTGCAAAATTTCCTACACGAGCTCAGACAATCTCGAAGCGCACAAAAGATTCTATTGCAAAGGTGTCATGAGTCCAAGAAGAGACTTTCAACTAGAATTGGATGATCAAAAAAATGACTACTATAGTCTTCAACCTCTCCAATCTCCTGGACCTCTTCTAGGTAGTACAAGACTCGTCGATTATGCTCCACCAACTAAAAAGACTAGATCAGAATCCGTGCCCGCGACTCTTAAATCTTTAGAAGAACTTTCCAAGTACCCAAGACCCAATACACTTCAGATGTTTGGTGGAGAAGTCCGAATTTTAGACAACACGGGAGAAACAAAAACCATGAGGATCGAACCTAGGCAGACTAACTCTCCGACTAGTGAACACATCGTCGGGAGTAAGTGCGCAACATCCGAAACTTCTTCTATTGTTGTCAGATCGGGTCTTCACTCAGGAGGTACCATGGTCCATAAACCTCCTTGTGGAACTCCTGCAAGTACGCCAAGTTCCACCATATCTTTGCCAGACGCTCCTAAACTGTTGGCACCCATCGTACCAAACATATCAACTACCAATCTAGCGCCCACGATGACGTGTTACAATTATCTGGAACCACATTTAAATCCTCTGACGAACATCACTGCCTATAATCCACTGACGCTTCCCCAGGCAGGAATCGCGAGCATTCTTCACGGAGGGAAGGTTATTCCTTATGTTCCCGGCATGCCCGGTCCACACACTCTGACCAATTCACCCACCGTAGACATATCTCCGAGCATACCCACTGGTGATGCAACGTACAAAGTGATTCCGGGATTGCCGGGCCTGCACATGATTCCTCAGCCTTTGGATCTCGTTAGTCCTGTCAAAATTAACACACCCAATGCTTCTGGAATTCCGGGACCACTGGAAAATTCTCTTGGACAACCTTTAGACCTTGCTAGTTCAGCAAAGGAAATCAAACAACCAAATTTTAAGACTCCAAGCAGTGAGAGTTTCGGGAGCTTGATGAGTCCTAAATTAACAAACTCTAAGGCAGACTTACAAGACAAACATATAACCGTTAGATCTCCTATGCCTAGTGAACTTAAGGAAGATCGACTTCAGAAAAATGAAGGTTCATACGATAgttcaaaaatggaaaaggtATTCAACTATCCTGAAAGCGGTCTCAAGTCGCCTAATTCTTATAGCAAGATGAGGTTCTCTCCGAAACTTGTAGAAAATAGGAAGAGATCATCTACCTGGAATGCTGAAGAGATAGAAGATAGATCAGTTAAGATCATGAAGCAGAGCCCCGTTTCGAAACTTGATTCGATTCCCCCCCACGAAAATGGTAGAATAAAACCCAATGCGATTAATGGAAAGCTAAAACCCGAATCGCCAGTGATATTTGTGAATCTAGATTCCACAACAGAAGTGCCAAAAACTTCCGTAGATTTAGTTGTTAGAGAAGACAAGTTAAAAGAGGATGAAACCGAAGAGACTAGTACTAGGTTTTTAAGACCATCTTCTTTGCCACTAAAGCCTGGAACTTTCACACCTAAAAAACATCATGGGATCACTCCGACAGCAAATACTCTTCCACTGATAAGTCCCGAAACGCCTAGGCAGAAAAAGTCTTATGGGCAAGTTTTCTTTAACGGACATGCTTACACGTACCTGGGTTTGAAGTGTTCTACGCGAGTATATTATTGCACCGTGAATAGAGCACAACCCATGTATGTTAAGCTACAAAGTGGGTTGTCAATGTATTCAAATTggaatatttgcaaaaaagcTCCACCAGATATGGTACATTATGATTCGAGGCATAGGCCCATGAATTACACGATTGCTTCGATGAAGCAAGAGGATATTATGACTCATTCTTCACAGAGACCAATGACACCTATCAGTCCGGATAGTGGATTGGAGTGTGATACTCCGGAGAAGATTAAAAGAATCAAGATATTTGATGGTGGATTTGAGAGCAACGAAGATTACACATACGTGAGAGGTCGAGGTCGTGGTCGTTATGTTTGTGAGGAATGTGGTATCCGATGCAAAAAGCCATCAATGCTGAAGAAACATTTCAGAACGCACACGGATATCCGACCCTACACTTGCAAATATTGTTCTTTCAGCTTCAAAACGAAGGGCAACCTGACGAAACACATGAAGTCGAAAACTCATTTCAAAAAGTGTATTGAGCTCGGAATAGTGCCAGTGCCAACAGCAGTACGCgatgaaaatatcgataaggAAGCATTAGCACTATTGCAAGCGCAAACCGGATGTGTTGTAActggagaagaagaagaggaagaggaggaagaggaagaagaagaagaaaccgAAGGTGACGAAAGTGAAGAATCCGGGAGTGAAGAACAAGAAGCAGCTCAAAGTCTTCTAAGTTTATCACAACGTAGTTCTAATAGATTACCAGGATTACTTCCTTTAGGAAGACCAACAACATATCCATACACATTAAGTCTTCCCAGTACTTCCGTAACAACCTCAGTAATTTCAACCTCTGCAAATTCCAGTCCTCTCACATCCCAAGGTACTTCTGTCATTCAAAACGAACTCTCCCACAGATATTATTTCCCTTCGAATCGCATAGTTTCCGAAGAATCTAAATCTGAAACCAGATCTGAATCCAGGTCCAGCGTCATTCAGTCTTCCATAAAAGACGAATCGGACCTCGAAATGGAAGAGATTGCCGAAACTAATCCTCGTCACTCATCTCAGCCAATGGATCTCACCACGAAACAAGTTTCCCAAAAACTTACTCCTTCAATTCACAGAGCCAAACCTGCTGATATTTTAACACCAGTTTCTGAACCTATTTTTCTTCAGACTATTGTCCAGAGTATGGAAAGATTACCAATTCAGGGCAGAGAATGGAAGCCAGAGACTGATGGGCATATGTTACAAGCTTATCTGACCGAAAGACACGTGATGGATAGTAAAATCAAGGAACAGTACCGCGTTGGAAACTGCACAGTGGACAAGCATACCAAAGAGAGAGAATTGTACTTAAACCAACAGAATTCCATGGTTTCGAGTCTCAACATCGAATCTCATGGTGTTCCAACCGTAACATATACAGACCCTACGAAATTGCAGCAAGCAGTTCAGGAGTCGAGGATCAAGAACTTGTCGAAGCAAGCTTCTGAAgatataaaaatggaaatcaGAGAGAAGATTTATCAGAATAATGTTAATATAGAAAGGCGACCTTTCGATATTGAATCGATTCATAAGAATAAGGATCTTTCAAGAACACCTTTATCTAGAGATTGTTACGAACCTCGACTGACCAATTCCATCGCAAGAACATCTGTTGGTTACGGAATGCTCATGACTTCGAGTATATCGGACAGAAGTAGTTTTGTTGTCGATCTTCCACCTGTCAATTCACAAAATCTAGACTCCCAGAAAAGCTTTCTTCAAGATGGTAATAACAGGATTGGATCGCATGTAAAGAATGAAATAGATAGAAGTACTATGTTCAACACAAGGAAGATGATGCGAGAAGTTGATAGACCTCGTGAAATCACGAGTCAATCTAATATGGATCTTAGAATAACCCCTGAACTAAAACACAGATCTCAGACTCCGGATTTAAGACCACCTAGTAGGGAAATTCGAAATCCGGATTTAAGGTCCCCTAATAGGGAGATTCGAACAACACCTCAAGATTATAGAATCCCTTCTCAGGAACTTAGAACCCCTAACCAAGAATTTAAGACTCTAATTCATGAGCCAAGAACAAAGCAAGAATTTTCGCCTCTTTCTGGAGTAGAAATGTCTCCAATGGTTGATGCTAGACCGCCGAGCAGGGACATGAgaataatttcagaatataGACCTCAGGATCCAATTTTGCAATCTCCGTTGCATGAATCCTCTGGCTTGCAAGAAATTCCAAGAACTCAGGGATTGGAAATTAGAACTTCGGAAAGGTCGGACTCGAAACTGGGTGTTGAGATTCCTAAGCAGAATGTTCATGAGAGTCTTAAGCACTCGATGGTAAGGAAGATGGTGGTTGGAAGTCCAGCTTTTAGACTTCCATCATCCCCTGGTGGAAACTCAAAGCCCCAGGCGGAATTCTTACAACCATCAAGTGGTCCAACTCCGAATTATGTCAGtgtgATGGAAGATGGGAGAAGTGTTTGCGGAATGTGCAACAAAGTCTTTAGCAAGGATGCAAAGGAGAGTCACTTGAGGTTGCATATCAACATTCATTATTTCGAGAGACCATTCAGGTGTGAGAGTTGCGCGATTCCTTTTAGAACTAAAGGTCATCTGACGAAGCACCAGCGATCCATTTCCCATCGCAATAAAGTCAGCATGACTTCTACTTTCGGTGCAGCTACCAGTAGCAATCCTAGACCTTTTAAATGCGATGATTGCAATAGTGCGTTTAGAATACATGGACATTTGGCTAAACATTTACGAAGCAAACTGCACATTATGAAGTTGGAATGCTTAGGAAAATTACCTTTTGGTACCTACGCCGAAATGGAAAGATCTGGTGTCAATCTCAACGATATCGATACTACCGACTGTGATAATAGTCTTACTAGTCTTCAGATTCTGGCTCAGAAACTCTACGAGAAAGATCCGAGCAAAATGAGTCAATGGGATATGGAGTCTGTTCAGAATCAAGCAGCCAGCAGAGGTGAAACTTCATCAGACGAGGGTGAGCCAATTCCATCTCATCCCCTTCATCAATATCCGACTCAAATTCCCCAAGACACAGAAGTGCCCCGAGCATATCACGTGCCAATTCACGAGGAATCGAAGTCTTCGACTTTGAAGTGTTCGATATGCTCTGCATCAATGCATACTTTAAACGAGTTGAAAGTTCATAGTTTCGTAGAGCACAACATCGAAACTGATTCAAGAGAAAAGGACTCCTTGCAGAAAAGATTTGTCGAAGAGATTCCAACCCGACAAGACGAGGCTGCGAAAAAACTGGATGATATATAG
- Protein Sequence
- MRVKSGGKVSSSLVRRARQAKPPRVTHLPVVVLKETHTVAMTDPQLTNNNNNNDGEPKYLHKKFKKVASTETANKVETKKESPPAEVPPPETPKKKAVKEVAAKVESVQEAESEPTESKKAGYVCTYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRTHALKTESGDSSKVSEDSDISLSDSASNGTGTPPPPPSSTPSSTVSTKTVKTGKIYKPKFHTALQNASNETETSSLSSNSSSSSCSSSTLTATPNSVKPNAEQLQEHIDKIITANQAIVDAVDPRLHKLMQRQQSLVETKPTEQPLNLSSGDEASVRKRCYSESFAQEGKDHLPNSDGSIIKDLLLKTVRPSNQEQNLGVDNFMCPFCKISYTSSDNLEAHKRFYCKGVMSPRRDFQLELDDQKNDYYSLQPLQSPGPLLGSTRLVDYAPPTKKTRSESVPATLKSLEELSKYPRPNTLQMFGGEVRILDNTGETKTMRIEPRQTNSPTSEHIVGSKCATSETSSIVVRSGLHSGGTMVHKPPCGTPASTPSSTISLPDAPKLLAPIVPNISTTNLAPTMTCYNYLEPHLNPLTNITAYNPLTLPQAGIASILHGGKVIPYVPGMPGPHTLTNSPTVDISPSIPTGDATYKVIPGLPGLHMIPQPLDLVSPVKINTPNASGIPGPLENSLGQPLDLASSAKEIKQPNFKTPSSESFGSLMSPKLTNSKADLQDKHITVRSPMPSELKEDRLQKNEGSYDSSKMEKVFNYPESGLKSPNSYSKMRFSPKLVENRKRSSTWNAEEIEDRSVKIMKQSPVSKLDSIPPHENGRIKPNAINGKLKPESPVIFVNLDSTTEVPKTSVDLVVREDKLKEDETEETSTRFLRPSSLPLKPGTFTPKKHHGITPTANTLPLISPETPRQKKSYGQVFFNGHAYTYLGLKCSTRVYYCTVNRAQPMYVKLQSGLSMYSNWNICKKAPPDMVHYDSRHRPMNYTIASMKQEDIMTHSSQRPMTPISPDSGLECDTPEKIKRIKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHFRTHTDIRPYTCKYCSFSFKTKGNLTKHMKSKTHFKKCIELGIVPVPTAVRDENIDKEALALLQAQTGCVVTGEEEEEEEEEEEEEETEGDESEESGSEEQEAAQSLLSLSQRSSNRLPGLLPLGRPTTYPYTLSLPSTSVTTSVISTSANSSPLTSQGTSVIQNELSHRYYFPSNRIVSEESKSETRSESRSSVIQSSIKDESDLEMEEIAETNPRHSSQPMDLTTKQVSQKLTPSIHRAKPADILTPVSEPIFLQTIVQSMERLPIQGREWKPETDGHMLQAYLTERHVMDSKIKEQYRVGNCTVDKHTKERELYLNQQNSMVSSLNIESHGVPTVTYTDPTKLQQAVQESRIKNLSKQASEDIKMEIREKIYQNNVNIERRPFDIESIHKNKDLSRTPLSRDCYEPRLTNSIARTSVGYGMLMTSSISDRSSFVVDLPPVNSQNLDSQKSFLQDGNNRIGSHVKNEIDRSTMFNTRKMMREVDRPREITSQSNMDLRITPELKHRSQTPDLRPPSREIRNPDLRSPNREIRTTPQDYRIPSQELRTPNQEFKTLIHEPRTKQEFSPLSGVEMSPMVDARPPSRDMRIISEYRPQDPILQSPLHESSGLQEIPRTQGLEIRTSERSDSKLGVEIPKQNVHESLKHSMVRKMVVGSPAFRLPSSPGGNSKPQAEFLQPSSGPTPNYVSVMEDGRSVCGMCNKVFSKDAKESHLRLHINIHYFERPFRCESCAIPFRTKGHLTKHQRSISHRNKVSMTSTFGAATSSNPRPFKCDDCNSAFRIHGHLAKHLRSKLHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLTSLQILAQKLYEKDPSKMSQWDMESVQNQAASRGETSSDEGEPIPSHPLHQYPTQIPQDTEVPRAYHVPIHEESKSSTLKCSICSASMHTLNELKVHSFVEHNIETDSREKDSLQKRFVEEIPTRQDEAAKKLDDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00089887;
- 90% Identity
- iTF_01393811;
- 80% Identity
- -