Basic Information

Insect: Synergus coniferae
Gene Symbol: -
Assembly: GCA_032164275.1
Location: JAUEJJ010000042.1:14142904-14147573[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.025 3.1 9.0 1.8 1 23 436 458 436 458 0.97

2 18 0.075 9.4 7.5 1.6 2 23 510 531 509 531 0.94

3 18 0.00011 0.013 16.5 1.4 1 23 587 609 587 609 0.98

4 18 0.22 27 6.1 0.6 2 23 613 634 612 634 0.94

5 18 3e-06 0.00037 21.4 1.2 1 23 683 705 683 705 0.93

6 18 0.0006 0.074 14.2 0.8 1 21 711 731 711 735 0.92

7 18 0.00024 0.03 15.4 3.0 2 23 803 824 802 824 0.95

8 18 4.1e-05 0.0051 17.8 3.8 1 23 875 897 875 897 0.97

9 18 0.00054 0.068 14.3 1.1 1 20 902 921 902 923 0.94

10 18 0.047 5.9 8.2 0.3 2 23 934 955 934 955 0.97

11 18 2.9e-05 0.0036 18.3 0.6 2 23 994 1015 993 1015 0.97

12 18 2.6e-05 0.0033 18.4 1.6 1 23 1020 1042 1020 1042 0.95

13 18 0.00015 0.018 16.1 2.9 1 23 1048 1070 1048 1070 0.98

14 18 4.6e-06 0.00058 20.8 0.4 1 23 1086 1108 1086 1108 0.95

15 18 3.8e-07 4.7e-05 24.2 0.6 1 23 1114 1136 1114 1136 0.99

16 18 0.00019 0.023 15.7 0.2 1 23 1142 1164 1142 1164 0.97

17 18 0.00077 0.096 13.8 4.2 1 23 1170 1192 1170 1192 0.96

18 18 0.011 1.3 10.2 0.4 1 20 1198 1217 1198 1219 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.025	3.1	9.0	1.8	1	23	436	458	436	458	0.97
2	18	0.075	9.4	7.5	1.6	2	23	510	531	509	531	0.94
3	18	0.00011	0.013	16.5	1.4	1	23	587	609	587	609	0.98
4	18	0.22	27	6.1	0.6	2	23	613	634	612	634	0.94
5	18	3e-06	0.00037	21.4	1.2	1	23	683	705	683	705	0.93
6	18	0.0006	0.074	14.2	0.8	1	21	711	731	711	735	0.92
7	18	0.00024	0.03	15.4	3.0	2	23	803	824	802	824	0.95
8	18	4.1e-05	0.0051	17.8	3.8	1	23	875	897	875	897	0.97
9	18	0.00054	0.068	14.3	1.1	1	20	902	921	902	923	0.94
10	18	0.047	5.9	8.2	0.3	2	23	934	955	934	955	0.97
11	18	2.9e-05	0.0036	18.3	0.6	2	23	994	1015	993	1015	0.97
12	18	2.6e-05	0.0033	18.4	1.6	1	23	1020	1042	1020	1042	0.95
13	18	0.00015	0.018	16.1	2.9	1	23	1048	1070	1048	1070	0.98
14	18	4.6e-06	0.00058	20.8	0.4	1	23	1086	1108	1086	1108	0.95
15	18	3.8e-07	4.7e-05	24.2	0.6	1	23	1114	1136	1114	1136	0.99
16	18	0.00019	0.023	15.7	0.2	1	23	1142	1164	1142	1164	0.97
17	18	0.00077	0.096	13.8	4.2	1	23	1170	1192	1170	1192	0.96
18	18	0.011	1.3	10.2	0.4	1	20	1198	1217	1198	1219	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGAGATAAATACGTCGGAACCACCGCAAAATGAGGAGGGAATTGTATCTGCAATGGAAATATGTCGTGTTTGCCTTCTTGGAAACGTTTTGATGCGAGACTTGTTTCAGGAGAATGAAGTCAACTCTTTATCTGTTAAAGCCATGAGCTTCGCCAGCGTTAAGATGATGCCAGGAGACGGTCTGCCAGGACAAGTATGTTGCGTTTGTGCAGATAAACTGGAATCAGCATATGAGTTCAAATTGCAAGTCGAACAAGCCGACAGTGTTCTCAGAGAAAAGTTTGATACACTTAACATTAAAGAAGAACTGTTTTTCAACGATGTCGAAGTTCATTTGGAAGGAGAGAGAACTCGCGCGAGGCGTGAAATAAATGACAATGGTGAATACGTGGAGACAACCGAATCATTGCATGATGTTGGCAGAGGAGACACACTTTTGAAAGATCATCTCGCTCTTTTACAAGTTCAAAAACTGGCAGAACAAGAAAGCATGTTACAGCAAgGTGTGGAACACTTACAAGAACATCTTCAAGAAGAATTGCAAGAGGAACACCTCCACGAGGAACATTTGCAAGAAGAACATTTACAGGAGGAACAATTACAGGAGGAACATTTGCACGAGGAACACCTTCATGAAGAACACTTACAAGAAGAGCACTTGCAGGAAGATCATTTACACGAAGAACACTTGCAAGAGGAACATTTGCAAGCAGAGAATTTGCAGGAAGAGGATTTACAAGACGAGCATTTACAAGAAGAAGACATGCAAGAAGAGGATCTACAAGAAAACGATATTGTGAACATAAACAAGGAGTCTAATCAAGAACTCTTGCACTTAGAACAGATTTCGCAATCCGTGCACCACTTTGCCGATCAGAGCAACGTCAAGGATGAAAGACTCCATGAAACAGAATCTGTAAATATGCAACAGCAAAGTTATCTTGATCAACAGGATTGCACTCAGATGAGTGACGACGATTTCAACAACGACGAACCTTTTGCAGTTACTCAAGAGTCTATGGAATATTCTTCGTCCTCAGTTAAAGAAAGAGAAACTGAGCAAGAGCAAGTCCGAGACCAATTTCAGCAATCTACAGAGGACTCGTCCATCGAGCAAATAAATCTCAGCTTGGAAGAAACATCTCCTCAGAGTGAAACACGCAGAAGCAAACGTAAAATTGCGCGTCGCTCTACCGTTTCTGAGCACAACTCCGACgaagagaattattttgaaaatctaaacCTTAGTTCACGACTGAAGAAGACTCAGATGGATAAATCAGAGAAAGTCTTCTTCATGTGTTACCTCTGTGACAAGGAATTCCTCTCTAAAGGAGTTTTGAAAGAACACATGCACTCTCACGAGGAAGTGAGAAGGACCCTTTCCTTAAAAAAGATGGAAGACAAGCCTCAAAAAACAGCAGCACCACAAAAACTATCCTCTACATCGAAAACATCTACTCCTCAGAAATCTGCTTCTCCTTTGAAAATGCCACCATCGGGAAAGAAACTGAATAAATGTCCTCATTGCGGAAAAGAGTATCTCTACATAATCTCATATAATAAGCATTTGAAACAACACGAAAAAGAAACCGGTGGCGTGAAGAGCGAGCCAATGCCATTGGAAGTTGTCTTCCGCGATGATGAAGATTCGGGTGACTTTGCTGGGTATGCAAACACTTCTGGTACTGACCACGCTACCACTGGAAATTATTCAGATTCGGATGAGCAAGGGAAGGAAGAAGTATATCAATGCAACAAATGCCCAGAAAAGTTTAATGCGAAACGAGCACTTCGAAAGCATACTATTAAACACACAAATTTGAAGTGTTCTGTTTGTGAAGAGCAATTCGACTCTATAGAAAAGATGAAGGAACACCGAACTCAACACGTGACAGAAGGGGTTTTAACGGAAGAAGATTTGAAGAAGGACCTTGAGAACCtgaaagatattttacaagatgtggaagaagatgaaaaaataGGTGATAAAAAGTCTCTTTCGAAAAATTCCGAGGCGCATACAAGCAACAAGTatagttgtaaaatttgtgGACAAGAGTTTTCAAGAAAGGATCAGTTACAAAAACACTCGGATCAGCACGGGAAAGCAAAGTCCTTCAAGTGCACTCAATGTAATAAAACCTTCGGCAATGAGCTCACATTACGTAACCATTTGATAGCAACTAATCACAAGACGATTTTGCATGGTCAAGAATACGACCCGAACAAGAGAATTAAACGAGTTGCAGCAAAGGCTGCCCAGAAGATTAtcgacaaaattaaaatcgaaaatgagAGTGATTACGAGGAGGATAAGACAAGTAAAAAAGACAGCAACTATCGGGAAGAATCGAAAACTCCAGGTAAAAGGACTTACAATAAAAAGGTTCTGGAATGTGCGACCTGTGATAAAAAATGCAGTTCTAAACAATCGTTAACAAAACACATGGAACAGCACGTCAAGGATGAAAAGggagataaagaaaaaatagataagGTAAAATCAGAGAGGTCAACGAAACAAGATACTGACAGACCACTAGATGACGATGATGACGATGATCTCGATGATGATTTCGAAAGCGGTCTGGATTGGCCAATGGACACTCACGAGTGTCCCACCTGTAAAAAGAGATACAGTACCAAGAAATCTTTATTAAGACATCAACTTTTACACGAGGAACCGAACTTTGAGTGCGACATTTGCAACGTTAAGTTCTACCGCAAAGATAAGCTTAAATCCCACTACGACAAATGTTCAGAGAAAAATCCCGATCAGGTGCGAAAATGCAATATCTGCGGGGACAGTTTCGAGAATAATGAAATTCTTCGTGAGCACCGAGCAAAGCATGTGACTGAAGGTATTTTGACGGAGGAGGATTTGAGGGAAATCGAACCTAGGCCCGAGGAAAGAAAATCAGGAGAGAAAATCGCGAGGAAGAGAAGAACAGATATTGTTGGTCTCGAGTGTACAGAATGCAATAAACAATATACTTCTAGAAAGGGACTTTTGCGACATATCCAAGTTCACGAAGGAAAGAAATACCTCTGCGATATCTGTCCAAAGAAATTCTACAGAAGAGAACATTTGAAGATTCACGTAGCGAAACACAACATGATCAAACCTTATAAATGCACACGTTGTACAAAGCGTTTTATTAAAGAAGAACAACTAACAAACCACCTTTCGAAACATGACAGGACCTTTAAAAAGAACAAGGAAACGGACAGTTCAAAGAGGTTCCTCTGCGAAATCTGCTCGAAGAGTTTTACTCAATCAACGACCTTGATTGCACATCTCCGAGCGCACAACGGAATAAAGCCTTACGTTTGCGAAGTTTGCTCGAGACCTTTTACGACGAATGCTTATCTCAAGATGCATATGAGAACTCACACGCAAGAACGACCTTATATTTGTCAGTTCTGTTCGAGGGCTTTCGCCAGAGCTGATACTTTGGCTAATCATCTGACTTCTCATACTGGAGAGGCGAAGTATCACTGCAAGTTTTGTCCGAAGAACTTTAGAAGATTGAAGTCGTTGAAGGAACACGTTTTTATCCACACGGGACAGAGACCTTATGCTTGTCCGACTTGTGATCGCAGGTTCAACAATAATGGAAGTAGATACGCACATAGTAAAAGGTGCAAACAAAATATGCTGCAGAATCAGAACCGTGTGCAAGTTGTAGCACCAGAAATGCAACAGAGGTTACAGCAAACTCTCGTCCAGTCACCTATGATTAAATCGCAGAATATTAAAACGATAACGATTGCTAGACAGGACCCCCTGACAGCGCAACAGGTTCTACAGCATCAGGAAATTCTGATGCCACTCATTTTACCCTTGACAGTGACTCTCGCCGATGTGGGAGAGGAAGTTATTTTACCGGAAGGTACCAAGATCTTCACCACGTCTTAA
Protein Sequence: MDAVEINTSEPPQNEEGIVSAMEICRVCLLGNVLMRDLFQENEVNSLSVKAMSFASVKMMPGDGLPGQVCCVCADKLESAYEFKLQVEQADSVLREKFDTLNIKEELFFNDVEVHLEGERTRARREINDNGEYVETTESLHDVGRGDTLLKDHLALLQVQKLAEQESMLQQGVEHLQEHLQEELQEEHLHEEHLQEEHLQEEQLQEEHLHEEHLHEEHLQEEHLQEDHLHEEHLQEEHLQAENLQEEDLQDEHLQEEDMQEEDLQENDIVNINKESNQELLHLEQISQSVHHFADQSNVKDERLHETESVNMQQQSYLDQQDCTQMSDDDFNNDEPFAVTQESMEYSSSSVKERETEQEQVRDQFQQSTEDSSIEQINLSLEETSPQSETRRSKRKIARRSTVSEHNSDEENYFENLNLSSRLKKTQMDKSEKVFFMCYLCDKEFLSKGVLKEHMHSHEEVRRTLSLKKMEDKPQKTAAPQKLSSTSKTSTPQKSASPLKMPPSGKKLNKCPHCGKEYLYIISYNKHLKQHEKETGGVKSEPMPLEVVFRDDEDSGDFAGYANTSGTDHATTGNYSDSDEQGKEEVYQCNKCPEKFNAKRALRKHTIKHTNLKCSVCEEQFDSIEKMKEHRTQHVTEGVLTEEDLKKDLENLKDILQDVEEDEKIGDKKSLSKNSEAHTSNKYSCKICGQEFSRKDQLQKHSDQHGKAKSFKCTQCNKTFGNELTLRNHLIATNHKTILHGQEYDPNKRIKRVAAKAAQKIIDKIKIENESDYEEDKTSKKDSNYREESKTPGKRTYNKKVLECATCDKKCSSKQSLTKHMEQHVKDEKGDKEKIDKVKSERSTKQDTDRPLDDDDDDDLDDDFESGLDWPMDTHECPTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKSHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLREIEPRPEERKSGEKIARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQFCSRAFARADTLANHLTSHTGEAKYHCKFCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQNRVQVVAPEMQQRLQQTLVQSPMIKSQNIKTITIARQDPLTAQQVLQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980354;
90% Identity: iTF_01393725;
80% Identity: -