Basic Information

Insect: Synergus coniferae
Gene Symbol: ZNF236
Assembly: GCA_032164275.1
Location: JAUEJJ010000042.1:8475748-8492025[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 4.1e-05 0.0051 17.8 2.1 2 23 188 209 187 209 0.96

2 28 0.00011 0.013 16.5 1.1 1 23 215 237 215 237 0.98

3 28 4.9e-06 0.00061 20.7 0.4 2 23 243 264 243 264 0.98

4 28 1.5 1.9e+02 3.5 0.1 3 23 272 292 270 292 0.95

5 28 0.00011 0.014 16.4 2.9 2 23 303 324 303 324 0.98

6 28 6.8e-07 8.4e-05 23.4 1.3 1 23 345 367 345 367 0.99

7 28 5.3e-06 0.00066 20.6 1.8 1 23 373 395 373 395 0.98

8 28 9.6e-05 0.012 16.6 2.5 1 23 401 424 401 424 0.95

9 28 0.2 24 6.2 5.0 1 23 433 456 433 456 0.97

10 28 1.1e-06 0.00014 22.7 1.5 1 23 566 588 566 588 0.98

11 28 0.00035 0.044 14.9 2.0 1 23 594 616 594 616 0.99

12 28 0.00029 0.037 15.1 0.2 1 23 622 644 622 644 0.97

13 28 0.00036 0.045 14.8 6.9 1 21 648 668 648 670 0.95

14 28 0.0072 0.89 10.8 9.1 1 23 725 747 725 747 0.98

15 28 7.8e-07 9.7e-05 23.2 1.9 1 23 753 775 753 775 0.99

16 28 0.00067 0.084 14.0 5.0 1 23 781 803 781 803 0.97

17 28 0.00011 0.014 16.5 7.4 1 23 809 831 809 831 0.98

18 28 0.012 1.5 10.1 0.2 1 23 1153 1175 1153 1175 0.95

19 28 0.0034 0.43 11.8 1.8 2 23 1221 1242 1220 1242 0.97

20 28 0.00049 0.061 14.4 2.2 1 23 1248 1270 1248 1270 0.98

21 28 0.0079 0.98 10.6 0.1 1 23 1276 1298 1276 1298 0.97

22 28 1.5e-07 1.9e-05 25.4 2.3 2 23 1370 1391 1369 1391 0.98

23 28 0.29 36 5.7 5.6 1 23 1397 1419 1397 1419 0.97

24 28 3.7e-05 0.0046 18.0 2.3 1 23 1425 1447 1425 1447 0.98

25 28 0.00012 0.015 16.3 1.8 1 23 1453 1475 1453 1475 0.98

26 28 0.00022 0.027 15.5 1.0 2 23 1691 1712 1691 1712 0.97

27 28 2.7e-05 0.0033 18.4 2.3 1 23 1718 1740 1718 1740 0.98

28 28 2.9e-06 0.00037 21.4 2.8 1 23 1746 1769 1746 1769 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	4.1e-05	0.0051	17.8	2.1	2	23	188	209	187	209	0.96
2	28	0.00011	0.013	16.5	1.1	1	23	215	237	215	237	0.98
3	28	4.9e-06	0.00061	20.7	0.4	2	23	243	264	243	264	0.98
4	28	1.5	1.9e+02	3.5	0.1	3	23	272	292	270	292	0.95
5	28	0.00011	0.014	16.4	2.9	2	23	303	324	303	324	0.98
6	28	6.8e-07	8.4e-05	23.4	1.3	1	23	345	367	345	367	0.99
7	28	5.3e-06	0.00066	20.6	1.8	1	23	373	395	373	395	0.98
8	28	9.6e-05	0.012	16.6	2.5	1	23	401	424	401	424	0.95
9	28	0.2	24	6.2	5.0	1	23	433	456	433	456	0.97
10	28	1.1e-06	0.00014	22.7	1.5	1	23	566	588	566	588	0.98
11	28	0.00035	0.044	14.9	2.0	1	23	594	616	594	616	0.99
12	28	0.00029	0.037	15.1	0.2	1	23	622	644	622	644	0.97
13	28	0.00036	0.045	14.8	6.9	1	21	648	668	648	670	0.95
14	28	0.0072	0.89	10.8	9.1	1	23	725	747	725	747	0.98
15	28	7.8e-07	9.7e-05	23.2	1.9	1	23	753	775	753	775	0.99
16	28	0.00067	0.084	14.0	5.0	1	23	781	803	781	803	0.97
17	28	0.00011	0.014	16.5	7.4	1	23	809	831	809	831	0.98
18	28	0.012	1.5	10.1	0.2	1	23	1153	1175	1153	1175	0.95
19	28	0.0034	0.43	11.8	1.8	2	23	1221	1242	1220	1242	0.97
20	28	0.00049	0.061	14.4	2.2	1	23	1248	1270	1248	1270	0.98
21	28	0.0079	0.98	10.6	0.1	1	23	1276	1298	1276	1298	0.97
22	28	1.5e-07	1.9e-05	25.4	2.3	2	23	1370	1391	1369	1391	0.98
23	28	0.29	36	5.7	5.6	1	23	1397	1419	1397	1419	0.97
24	28	3.7e-05	0.0046	18.0	2.3	1	23	1425	1447	1425	1447	0.98
25	28	0.00012	0.015	16.3	1.8	1	23	1453	1475	1453	1475	0.98
26	28	0.00022	0.027	15.5	1.0	2	23	1691	1712	1691	1712	0.97
27	28	2.7e-05	0.0033	18.4	2.3	1	23	1718	1740	1718	1740	0.98
28	28	2.9e-06	0.00037	21.4	2.8	1	23	1746	1769	1746	1769	0.96

Sequence Information

Coding Sequence: ATGTTGACTTCGCGGACTGATGGTAATTCAATGACAGCCACCATGGATACAATTCctttaagttttattatttctgacGATGGGGGAACATTATTGGCTGTGGCAGAAACTGGAGATGGTACAATTGAATTGATGAGCGGACCCATTACCTTCATAAACGAAACGAATGATATTTCCGTCACTTCCAAAACAGCTAACGACAATCTAGAATCGAATATGcccttatttcaattcaattttggaGGAATTCCGGGATCGAGAACGCAACAAGCAACCTTGGTTCCTGCAAATATGATTTCCTTAATTTCAAACGATTCCAATGCGATTCCAACAGTTCCAGTGAAAGAAGATCAATTTCAAGTTGTTCATGAAATTTCTCAATACCAACCTATCAGGGCGAAACCGAAAATGTCttctaaagaatttccatCTCTCGAATCATCTTTACTAACACCTGTTGTATCTCCAATAttcaaatcttcaaaatctcaGTTGAAATCTCCGAAAAGAAGCCCTGGCAGACCaaagaaaactgaaaactctcttagaaaggTTGAGTTGAAATGCGAAATTTGTGGcgaggattttaagaaacaaaGTTTATATCGAAAGCATATGGAACATCATGCAGAGGAAAAACCGCATCGGTGTCCAAAGTGTTCTGCATCATTTAATGTGCCGACAAATTTTACACTTCACATGGCGACACACAACATAGGCGAGCCAAAATGTCCCGAATGTGGAAGAAAATTCGCGAGAATGGCGAGTTTAAAATCCCACATGATGCTGCACGAGAGAGAGGAAAACCTTTTCTGCACCGAGTGCGAAGATGCATTCTTAACAAAGGCTCAACTCGACGCTCATCTAAAACTTCACAACGAGAAATGGACGACCGAGGATGTCAGGAAGTGCAAGCTCTGCCACAAACAGTTCACTCAGCCAGCTTTGTACAGACAACACATTCGAGAACACTACAGGttgcAAACGAAGCTAGTGAAGCAGACGAGGAGAGGGACAAGGCACAAGACAATGTACAAGTGCAAAATATGTCTAAAGTCTTTCCAAAAACCGAGTCAGCTGATGAGACATATCAGAGTCCATACAGGAGAAAAACCATTCAAGtgTACAGTTTGCAGTAGAAGATTTACACAGAAAGGTTCGCTTCAGATTCATATGTCACAACACGAGGGAGTCAGGCCACACGCTTGTCATTTTTGCAGTGCGAGATTTAGTCAAAAGGGAAACCTAAACGCCCACATCCAGAGGGTGCACAATCTAACAAATGAGGGTCAGATATATGCATGCACATACTGCTGTTGTGCCTTCAAAAAACTAGGAAGCTTGAATGCACATTTAAAGAGAAGACACGCTCTTCCTATTGAGGAAGAAAATCCAAAGTGTGATAGTTCGACCTCAGACGCTGATATGCAAGCAACTGTGGAAAATGTCATGTCACAGCTTGCTTCTCTTGAATCTGAGGTTCAAAATCCAGCAGATTCAACTGAAAAGGATAATAATGATATCTTGCAACAAGCTTTGGAAAATAGCGGACTTCCGAGCAAAGAAGAACAAGCtgaagcggctaaaaaatctaaaggaCGAACAATGATGGTGACATTATTAGATAGAAATGCAGATGGCGATGGAAGaaAATATGTCACAATTAAACAGCGACATGTTGGCGACATGCTTTGGTTTACTTGCACCTTTTGCCAGAAAGAGTTCAAAAAGCCCTCGGATCTCATAAGACATTTACGAATTCATACACAAGAGAAACCATTTCGGTGTTCGTACTGCAGTCGCACCTTCGCTTTAAAATCAACAATGGTGAGTCATGAACGGACACATTCTGTCACGAAGAAATTTCCATGTGGATCGTGcgaaaatgtatttacaaCTCGTAGTAGTCTTACTGCTCACGCAAGgtTGCATACAAGGGCCTTTACTTGCAACGTTTGCAAAAAGTGCTTCAGCGGAAGTTCCTTATTGAAAAATCACATGAAGTGCCACTCCAAACCTAAGACGAAAATATCTCCAGAGGTAGAAAGTCTCGTTCCCCAGATTGTTTTGAAAGAACCATTGCTTATCAGCGATGCGGGGAATAAAATTAGTGTAGCTCAAGTAAAATCGAAAAAGCAGCAAGTCTACGAAGGTGGAGATTCAGCAAGGCCCCATAAATGTACAATGTGCAGTGCTGCCTTTAGAAAAACGAGTCACTTGAAGCAACATCATCGAAGACACACCGGAGAAAAACCTTACAAATGCCCGAAATGTGATAgGAGATTCACTTCGAATAGTGTTCTGAAGTCGCATTTGCAAACTCATGAGGATGCGAGACCGCACAGTTGTTCCGTCTGCAATGCCAAATTTACAACGCATAGTAGCATGAAGAGACATCTAATTACTCACAGTAATAAAAGGCCTTTTATGTGTCCTTACTgtcataaaacctttaaaactTCCGTCAACTGCAAAAAGCACATGAAAATTCATAAGGCCGAATTGGCTCTACAGCAAGTGGAAAAGCAGAAGATGCAGTCGAAAATTATTACGATTGGGGACTGTCCGAAAGAAAGTccaggaaataaaaaagaagattcaGTACCTGAAACTATCGCTTTAGGGGATGAAATCACGGTGCCATTTCAAACTCAGTCTGTTGattttacagataattttTCTGGTCAGTATCAACCTATTGTGATGCAAGACAAAGATAAAATTCACATTCCAATCTCTGTCGCAGAAAGTATTCATCaaaacgtCCTGAGTACTGGTAGTGTAAATTTAGGAATTACTCAAACTTTACATGCTGATGAAACGGGCACGATTACTCTGCCAAATTATTCTGGAGAAGACACACTTAGTGCGGAGAATATTCGAGAACTAGAAGAAACTTTAAACCAGCAGCTCATCAATATCGGAATGAACCTCGGATTAGAAAACCCAATATCTAAACAAATAACAGAAACAAATTCTTCTCTCGACTCGAGAAATCAGCCCGtcctgaatattatttataatagtgATAAAGCCTTAGAATCCGTTACGAATAACGAAGTCAATACTCATATATTTACACCACAATTCGACACATTCGACATAAGTCAAATCTCCTTAcaggcAAATGGAGACATGGATGTTGGAATCGAATCAGGTACAACGACTAGCATGGCAAATATTTTGCCCAGGTCCGTGCAAGAAGAGCAACATTTGTCCATTCCAGTGACAACTGGTTCTGTTGAAATGACTCAAAAACCATTCAAGCATTTAACGATTGTCAGTCCAATGCAAACTCAGCTCGAAATTTCGAAGCCCCTTCAAACTACTAGaatgtattcaaaaattatcgcCAAAGCTGACACAACAAATGGGATTGAagttcaaagttttaaaaataattccaaagtAGAGGAGACGAATATCAGCATTTCAGGAAATATGGATCAATTTATGTTTTCgtgTACAATATGCAATAAACTATTCGAGAGAGAATTGGATTTAATATATCATGTCGAAGAACACATCGCTTCAGCAGCAAAAGAAACTCAAaccactaaaaataatttagttgaAGCTACGGCTCTAATGCATGTTAATTCACCAGCGAAAGATCCTGAACCTAGTCAAAATGATTTAATCGAATCGAATCCTTTACTTGAGTGTCACATGTGCAGGAAAAACGGGTTCACAGCTTCCGAATTGAAGgaacatttgaaaactcaTCAGGGTGAGAAGGAGTTTGAATGCATGGAATGTTCCCTAAAGTTCTGCACAAATGGCGGATTGAGTAGACATCTAAAAATGCACGCTGCTAAAAAtcAATATAAATGTATCATATGCGATAAAGTATTACCGAATAAAGTACAAATGGAAATTCACCTTCGAGCACACGATGAATTATTCACTGGGGTTGTGGAGGCCGATAGTTCTGAAAAAGAATCACTCcctgtagaaataaaatttcagaacgTTTCTAATGACAAATGTACTCTGAATACGGACATAAAGATATCTGAGCAAATTTTGTTGGACTCTGCAGATATTATGGAAAGGCTTaagCTTCAGAATTTGAAgggaaaagaagagaagaaaccAGAAAAGAATAAATGCAAATTCTGTCCGAAGACCTTCCGAAAACCTAGTGATCTCACAAGACACATTCGAACTCACACGGGAGAACGACCTTATCAATGTCAATTTTGCAGCAAGAGTTTCGCAGTCAAATGCACACTTGATTGTCATATGCAAATTCATAGTGGCAAGAAAACTTTCAGTTGTCACGTTTGCAATAGTTTTTTCGCAACGAAGGGAAGTTTGAAGGTCCACATGAGGCTGCACACTGgttCTAAACCATTCAGATGTCCAGTTTGCGATTTGCGATTCCGAACGTCAGGTCATCGAAAAGTGCACCTGTTATCTCATGCTAGAGAACAGAAAGAGAATAAACCTCGGAAACCAAAGCAGAGAAAAACTGCAGCTATCGCAAGTGTCGTCGCCGATGTTGAAAACGCAATCGAGTCCATCAACAACGAAAACGTAGTTCAAAATCCTCCGCAGgatgaaatagaattttccAACTTAGACACGGTTACCATTGATGCTTCCGCTCTCACCGACCAAATCACATTCAATCCTGATGGAACCGTTTTAAACAACAATTCTGTCCTCTCTGTCAGCGAAAGCAATCAACTTGTAGCCAATTTGCACTTCTTACTTGCCAACGGTCTCATGACAATCCAACCTGACGGTTACGTAACATTCCAGGATTCAGTTCTTCCTGGATTAGCTAATTTACAATTGGATACTTCTCAGGGCGATATTCTTAACTCAGCGGACTCtgagaatattattatcactCAGGAACCAAATTCTGTTGATTTGGAACAATCAGGGTTTTTAAACAACTGCACAGCAGTTTTACAAGTTGAGGACAACAGTATGATTTCGAATTCTAACGTCTCTAATTCTAGtatttctaattctaatatttcgAATTCTGGAATCGAAAATTCCAATATTCCTAATTCTATTGGACTTAAAACTTCAAAGAATGGAACACCTAGGCGAGAATGTGACATTTGTGGAAAGGTATTTATGAAACCTTGTCAGGTCGAGAGACACAAAAGGATCCATACTGGTGAGAGGCCTTTTAAATGTGAGCTTTGCGATAAAGCCTTCGCGCAGAAAAATACTCTCATAATGCACCAAAAGCACCACACGGGAGATCGACCTCATAATTGTCCATACTGTACTTATTCTTTTTCCCAGAAAGGGAATTTACAAACACATCTTAAGCGAGTTCATCAAGACGAAGCTCCCGAGACGAAAAAATTGTGGAGGGAACAGCCATCGAAATTTATACAGGAGAGCACAGTTGATACCAGAATTCTAGGTCTTGATGACATCTCGCTTGTTGaacttttaaagtaa
Protein Sequence: MLTSRTDGNSMTATMDTIPLSFIISDDGGTLLAVAETGDGTIELMSGPITFINETNDISVTSKTANDNLESNMPLFQFNFGGIPGSRTQQATLVPANMISLISNDSNAIPTVPVKEDQFQVVHEISQYQPIRAKPKMSSKEFPSLESSLLTPVVSPIFKSSKSQLKSPKRSPGRPKKTENSLRKVELKCEICGEDFKKQSLYRKHMEHHAEEKPHRCPKCSASFNVPTNFTLHMATHNIGEPKCPECGRKFARMASLKSHMMLHEREENLFCTECEDAFLTKAQLDAHLKLHNEKWTTEDVRKCKLCHKQFTQPALYRQHIREHYRLQTKLVKQTRRGTRHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCTVCSRRFTQKGSLQIHMSQHEGVRPHACHFCSARFSQKGNLNAHIQRVHNLTNEGQIYACTYCCCAFKKLGSLNAHLKRRHALPIEEENPKCDSSTSDADMQATVENVMSQLASLESEVQNPADSTEKDNNDILQQALENSGLPSKEEQAEAAKKSKGRTMMVTLLDRNADGDGRKYVTIKQRHVGDMLWFTCTFCQKEFKKPSDLIRHLRIHTQEKPFRCSYCSRTFALKSTMVSHERTHSVTKKFPCGSCENVFTTRSSLTAHARLHTRAFTCNVCKKCFSGSSLLKNHMKCHSKPKTKISPEVESLVPQIVLKEPLLISDAGNKISVAQVKSKKQQVYEGGDSARPHKCTMCSAAFRKTSHLKQHHRRHTGEKPYKCPKCDRRFTSNSVLKSHLQTHEDARPHSCSVCNAKFTTHSSMKRHLITHSNKRPFMCPYCHKTFKTSVNCKKHMKIHKAELALQQVEKQKMQSKIITIGDCPKESPGNKKEDSVPETIALGDEITVPFQTQSVDFTDNFSGQYQPIVMQDKDKIHIPISVAESIHQNVLSTGSVNLGITQTLHADETGTITLPNYSGEDTLSAENIRELEETLNQQLINIGMNLGLENPISKQITETNSSLDSRNQPVLNIIYNSDKALESVTNNEVNTHIFTPQFDTFDISQISLQANGDMDVGIESGTTTSMANILPRSVQEEQHLSIPVTTGSVEMTQKPFKHLTIVSPMQTQLEISKPLQTTRMYSKIIAKADTTNGIEVQSFKNNSKVEETNISISGNMDQFMFSCTICNKLFERELDLIYHVEEHIASAAKETQTTKNNLVEATALMHVNSPAKDPEPSQNDLIESNPLLECHMCRKNGFTASELKEHLKTHQGEKEFECMECSLKFCTNGGLSRHLKMHAAKNQYKCIICDKVLPNKVQMEIHLRAHDELFTGVVEADSSEKESLPVEIKFQNVSNDKCTLNTDIKISEQILLDSADIMERLKLQNLKGKEEKKPEKNKCKFCPKTFRKPSDLTRHIRTHTGERPYQCQFCSKSFAVKCTLDCHMQIHSGKKTFSCHVCNSFFATKGSLKVHMRLHTGSKPFRCPVCDLRFRTSGHRKVHLLSHAREQKENKPRKPKQRKTAAIASVVADVENAIESINNENVVQNPPQDEIEFSNLDTVTIDASALTDQITFNPDGTVLNNNSVLSVSESNQLVANLHFLLANGLMTIQPDGYVTFQDSVLPGLANLQLDTSQGDILNSADSENIIITQEPNSVDLEQSGFLNNCTAVLQVEDNSMISNSNVSNSSISNSNISNSGIENSNIPNSIGLKTSKNGTPRRECDICGKVFMKPCQVERHKRIHTGERPFKCELCDKAFAQKNTLIMHQKHHTGDRPHNCPYCTYSFSQKGNLQTHLKRVHQDEAPETKKLWREQPSKFIQESTVDTRILGLDDISLVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01391385;
90% Identity: iTF_01390513;
80% Identity: -