Scon013726.1
Basic Information
- Insect
- Synergus coniferae
- Gene Symbol
- Snapc4_1
- Assembly
- GCA_032164275.1
- Location
- JAUEJJ010000046.1:8131261-8133923[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.3 3.7e+03 -1.3 0.0 3 16 178 191 177 192 0.92 2 6 0.36 6e+02 1.3 0.0 13 43 226 261 223 264 0.79 3 6 3.4e-06 0.0056 17.4 0.4 3 44 272 315 270 317 0.93 4 6 3.7e-10 6.1e-07 30.1 0.4 2 43 324 369 323 372 0.95 5 6 8.9e-13 1.5e-09 38.5 0.0 1 44 378 422 378 424 0.93 6 6 4.8e-12 7.9e-09 36.1 0.3 4 44 431 471 429 473 0.95
Sequence Information
- Coding Sequence
- ATGAGCGATACAGAGGACCAGCTTATTCTCGAGGATATCCGAGCATTGGAAGATGCTTTATCCCGAACAAATGCACCACGGCCACCACGTCCTATACATGAAGTTTcgttcaaaaaagaaattattcctTCCAACGATCGACCTCCACAAGAAGTCGAAATCCATTCAATCAATCATTTTCCAAACTCGGAATCTGTTCCAGTCAATAACGAAGAATACAGTGAAAATCCCACTGAAAATACTACCAATTCGGTCAGAGCATTAGAACTTAATCAAAAGCTAATTGAACATCTGATCGCTACTCGTAGTGAAGTCGCTGCAATCCTCGAtgaatgcaaaagaaaaagggaAGGTGTGaacacaaaaattaaacagCGTTTGAGAATGCAACCAACTAGAAGAGTTTTATGTTCGCATGCTGGCATGCCTTATTTCAAggataaagattttttcatgGCCCCTGAAAATGGGGacacgaaattaaaaaaagctaGAGGTGAATTACAAATAATCAACCTTCGACGTGTCTGTCGTTGGAcaataaaagataaagagaCTCTTCTGAAAGCTATTTATCACGAAGTGCTCTccaatttgaagaatattgataaaatagaGATGGATGCGGTTGAAAAAATGACTTTGAAGAAGACCCACTCTTTGCCAACTTGTGTTTTAAATGCCATTGGACACCTAGGGGACAGAGAATTTGATTGGATGAAGATTGCTGTGACAgactttcaaaataaacattctCCAGAAGAATGTCGCGTTATGTGGAACGTTTTTTTGCATCCGGATATCAATAAGTTTAAGTGGAAAAATAAAGAGCTGTCTAATTTGCATAATCTTGCCAAGAactataaatatcaaaattggTCTATGATTGCCAAAGATTTAggtaCTCAGAGAAGCGGCTATCAATGTTTTGTGAAATACAACACTACCAGAAAATCTCTGGATAATGAAAAACCGTGGGTTAAAAAGGAGGACAGAAAACTTATACACCTcgtaaacaaattcaaaattggcGACTTCATCAACTGGGGAGATGTCGCAAGCTGCATAGAAAACCGAACCAAACAGCAAATTTACTTCCGCTGGATGTATAGTCTCGCCCCTCACATAAAAAAAGGCAGATTCACCGATGAGGAAGACAGGCTTTTAATAGACGCTATTGATAAGTACGgtaccaattttaaaaaaatatctacccTCGTCCTACCAGCTAGGACTTCCGCCCAGCTTAGTCATCACTACAACACCATCGCCAACAAGGACCAAAATATCTGGACCCTCCAACAAGACATAAAGCTTCTTGAATTGTATAAGGAACACGGAAACAATTGGGCCAAGATATCAACTTTATTTGATAACAAAAGCAGAATTCAACTTCGTCACCGATATTCTTCCATCCttcgatatgaaaaaaaaggaattccACTCACTGAAATTCCTcggaataattttcaacacaGAGTAATAAATCAATCTCTTGTCTTTCATAAAGTGCCAAGAAACATTGACCAAAATCAATCCCCGAAAATTAACGAGGTAGATAAAGAAATAATCGAATATTTTCACAAACTCAATGCTGTTCCTTCTAAAGTCGGTCGCAGgcaaaaattttatcatcCAAATGAACTTGACATCATCACCAAGAAAATGTACAACATTCTTGAACTGTTACATGCAAAACTGAATATTCCCTACGATTTAGACGAATACGATTGTCTGTCTGAGAAAGATAAACAGCTTTTAAATTCGCTGAAAAATCTTCCTCACAATGCAGTGCATGGACCATTTTCCAGACATGTGGAAAAAATGCGAGTCACTATGTTTGAGCATGATCAACAAGAAGAGAATCATTTTATTCCGCCTTTGCCTTTTAGAACTCTTTCGAAGGGcgataaaattaatcaaatgatAAACTACAGTCTCTACATCGACGAGAAGTTTTTTCAAGAACGAGAAATGACCATAAAAACACCTTACAATATCATCGAGCCAATTGGTGAAGatgtaaattatgaatttgaCAAACTAGGCGAGCTGCTTGCCAGACAGAAGTACAAATATGAGAAACAGgctaaaaatagtatttatgTATTGACGCCTGATGAATTGGCAAGGAGGGAAATGAGAaatcgaaattattatttaccaaGTACTTCGAGTGTTTCAAATTCAGATGTCATGGTTGTAGGTACTTATCAAAACTACTCTATGCATAATGATTacgatgaaaataaattcccttcgatgaaaccaaatttttgGACGTTACGTGGTTATCAGAAAATTCTCGATgtaatcaaagaaattaatcTGACGGAAAATGCTATTGATTGTCCGGTACCTAAGATGAAAATGAACGAGAAGGGGAAAAAAGCTTTAGATATGCTGAGAGTGCGTttgattcaattatttaagtaCCCTATTATTATGTCGCAAGTCATGCCACCGGAGTTTATCCACGAAGCAGCAGAGATTTTCAACCAAGGAGCTAAAAGGAAAAGTGAATCTAGAAACATTGGTAAATCTGGGAAAAggcaaaaaattcaagagagtCATACGTAA
- Protein Sequence
- MSDTEDQLILEDIRALEDALSRTNAPRPPRPIHEVSFKKEIIPSNDRPPQEVEIHSINHFPNSESVPVNNEEYSENPTENTTNSVRALELNQKLIEHLIATRSEVAAILDECKRKREGVNTKIKQRLRMQPTRRVLCSHAGMPYFKDKDFFMAPENGDTKLKKARGELQIINLRRVCRWTIKDKETLLKAIYHEVLSNLKNIDKIEMDAVEKMTLKKTHSLPTCVLNAIGHLGDREFDWMKIAVTDFQNKHSPEECRVMWNVFLHPDINKFKWKNKELSNLHNLAKNYKYQNWSMIAKDLGTQRSGYQCFVKYNTTRKSLDNEKPWVKKEDRKLIHLVNKFKIGDFINWGDVASCIENRTKQQIYFRWMYSLAPHIKKGRFTDEEDRLLIDAIDKYGTNFKKISTLVLPARTSAQLSHHYNTIANKDQNIWTLQQDIKLLELYKEHGNNWAKISTLFDNKSRIQLRHRYSSILRYEKKGIPLTEIPRNNFQHRVINQSLVFHKVPRNIDQNQSPKINEVDKEIIEYFHKLNAVPSKVGRRQKFYHPNELDIITKKMYNILELLHAKLNIPYDLDEYDCLSEKDKQLLNSLKNLPHNAVHGPFSRHVEKMRVTMFEHDQQEENHFIPPLPFRTLSKGDKINQMINYSLYIDEKFFQEREMTIKTPYNIIEPIGEDVNYEFDKLGELLARQKYKYEKQAKNSIYVLTPDELARREMRNRNYYLPSTSSVSNSDVMVVGTYQNYSMHNDYDENKFPSMKPNFWTLRGYQKILDVIKEINLTENAIDCPVPKMKMNEKGKKALDMLRVRLIQLFKYPIIMSQVMPPEFIHEAAEIFNQGAKRKSESRNIGKSGKRQKIQESHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01392694;
- 90% Identity
- -
- 80% Identity
- -