Basic Information

Gene Symbol
Snapc4_1
Assembly
GCA_032164275.1
Location
JAUEJJ010000046.1:8131261-8133923[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.3 3.7e+03 -1.3 0.0 3 16 178 191 177 192 0.92
2 6 0.36 6e+02 1.3 0.0 13 43 226 261 223 264 0.79
3 6 3.4e-06 0.0056 17.4 0.4 3 44 272 315 270 317 0.93
4 6 3.7e-10 6.1e-07 30.1 0.4 2 43 324 369 323 372 0.95
5 6 8.9e-13 1.5e-09 38.5 0.0 1 44 378 422 378 424 0.93
6 6 4.8e-12 7.9e-09 36.1 0.3 4 44 431 471 429 473 0.95

Sequence Information

Coding Sequence
ATGAGCGATACAGAGGACCAGCTTATTCTCGAGGATATCCGAGCATTGGAAGATGCTTTATCCCGAACAAATGCACCACGGCCACCACGTCCTATACATGAAGTTTcgttcaaaaaagaaattattcctTCCAACGATCGACCTCCACAAGAAGTCGAAATCCATTCAATCAATCATTTTCCAAACTCGGAATCTGTTCCAGTCAATAACGAAGAATACAGTGAAAATCCCACTGAAAATACTACCAATTCGGTCAGAGCATTAGAACTTAATCAAAAGCTAATTGAACATCTGATCGCTACTCGTAGTGAAGTCGCTGCAATCCTCGAtgaatgcaaaagaaaaagggaAGGTGTGaacacaaaaattaaacagCGTTTGAGAATGCAACCAACTAGAAGAGTTTTATGTTCGCATGCTGGCATGCCTTATTTCAAggataaagattttttcatgGCCCCTGAAAATGGGGacacgaaattaaaaaaagctaGAGGTGAATTACAAATAATCAACCTTCGACGTGTCTGTCGTTGGAcaataaaagataaagagaCTCTTCTGAAAGCTATTTATCACGAAGTGCTCTccaatttgaagaatattgataaaatagaGATGGATGCGGTTGAAAAAATGACTTTGAAGAAGACCCACTCTTTGCCAACTTGTGTTTTAAATGCCATTGGACACCTAGGGGACAGAGAATTTGATTGGATGAAGATTGCTGTGACAgactttcaaaataaacattctCCAGAAGAATGTCGCGTTATGTGGAACGTTTTTTTGCATCCGGATATCAATAAGTTTAAGTGGAAAAATAAAGAGCTGTCTAATTTGCATAATCTTGCCAAGAactataaatatcaaaattggTCTATGATTGCCAAAGATTTAggtaCTCAGAGAAGCGGCTATCAATGTTTTGTGAAATACAACACTACCAGAAAATCTCTGGATAATGAAAAACCGTGGGTTAAAAAGGAGGACAGAAAACTTATACACCTcgtaaacaaattcaaaattggcGACTTCATCAACTGGGGAGATGTCGCAAGCTGCATAGAAAACCGAACCAAACAGCAAATTTACTTCCGCTGGATGTATAGTCTCGCCCCTCACATAAAAAAAGGCAGATTCACCGATGAGGAAGACAGGCTTTTAATAGACGCTATTGATAAGTACGgtaccaattttaaaaaaatatctacccTCGTCCTACCAGCTAGGACTTCCGCCCAGCTTAGTCATCACTACAACACCATCGCCAACAAGGACCAAAATATCTGGACCCTCCAACAAGACATAAAGCTTCTTGAATTGTATAAGGAACACGGAAACAATTGGGCCAAGATATCAACTTTATTTGATAACAAAAGCAGAATTCAACTTCGTCACCGATATTCTTCCATCCttcgatatgaaaaaaaaggaattccACTCACTGAAATTCCTcggaataattttcaacacaGAGTAATAAATCAATCTCTTGTCTTTCATAAAGTGCCAAGAAACATTGACCAAAATCAATCCCCGAAAATTAACGAGGTAGATAAAGAAATAATCGAATATTTTCACAAACTCAATGCTGTTCCTTCTAAAGTCGGTCGCAGgcaaaaattttatcatcCAAATGAACTTGACATCATCACCAAGAAAATGTACAACATTCTTGAACTGTTACATGCAAAACTGAATATTCCCTACGATTTAGACGAATACGATTGTCTGTCTGAGAAAGATAAACAGCTTTTAAATTCGCTGAAAAATCTTCCTCACAATGCAGTGCATGGACCATTTTCCAGACATGTGGAAAAAATGCGAGTCACTATGTTTGAGCATGATCAACAAGAAGAGAATCATTTTATTCCGCCTTTGCCTTTTAGAACTCTTTCGAAGGGcgataaaattaatcaaatgatAAACTACAGTCTCTACATCGACGAGAAGTTTTTTCAAGAACGAGAAATGACCATAAAAACACCTTACAATATCATCGAGCCAATTGGTGAAGatgtaaattatgaatttgaCAAACTAGGCGAGCTGCTTGCCAGACAGAAGTACAAATATGAGAAACAGgctaaaaatagtatttatgTATTGACGCCTGATGAATTGGCAAGGAGGGAAATGAGAaatcgaaattattatttaccaaGTACTTCGAGTGTTTCAAATTCAGATGTCATGGTTGTAGGTACTTATCAAAACTACTCTATGCATAATGATTacgatgaaaataaattcccttcgatgaaaccaaatttttgGACGTTACGTGGTTATCAGAAAATTCTCGATgtaatcaaagaaattaatcTGACGGAAAATGCTATTGATTGTCCGGTACCTAAGATGAAAATGAACGAGAAGGGGAAAAAAGCTTTAGATATGCTGAGAGTGCGTttgattcaattatttaagtaCCCTATTATTATGTCGCAAGTCATGCCACCGGAGTTTATCCACGAAGCAGCAGAGATTTTCAACCAAGGAGCTAAAAGGAAAAGTGAATCTAGAAACATTGGTAAATCTGGGAAAAggcaaaaaattcaagagagtCATACGTAA
Protein Sequence
MSDTEDQLILEDIRALEDALSRTNAPRPPRPIHEVSFKKEIIPSNDRPPQEVEIHSINHFPNSESVPVNNEEYSENPTENTTNSVRALELNQKLIEHLIATRSEVAAILDECKRKREGVNTKIKQRLRMQPTRRVLCSHAGMPYFKDKDFFMAPENGDTKLKKARGELQIINLRRVCRWTIKDKETLLKAIYHEVLSNLKNIDKIEMDAVEKMTLKKTHSLPTCVLNAIGHLGDREFDWMKIAVTDFQNKHSPEECRVMWNVFLHPDINKFKWKNKELSNLHNLAKNYKYQNWSMIAKDLGTQRSGYQCFVKYNTTRKSLDNEKPWVKKEDRKLIHLVNKFKIGDFINWGDVASCIENRTKQQIYFRWMYSLAPHIKKGRFTDEEDRLLIDAIDKYGTNFKKISTLVLPARTSAQLSHHYNTIANKDQNIWTLQQDIKLLELYKEHGNNWAKISTLFDNKSRIQLRHRYSSILRYEKKGIPLTEIPRNNFQHRVINQSLVFHKVPRNIDQNQSPKINEVDKEIIEYFHKLNAVPSKVGRRQKFYHPNELDIITKKMYNILELLHAKLNIPYDLDEYDCLSEKDKQLLNSLKNLPHNAVHGPFSRHVEKMRVTMFEHDQQEENHFIPPLPFRTLSKGDKINQMINYSLYIDEKFFQEREMTIKTPYNIIEPIGEDVNYEFDKLGELLARQKYKYEKQAKNSIYVLTPDELARREMRNRNYYLPSTSSVSNSDVMVVGTYQNYSMHNDYDENKFPSMKPNFWTLRGYQKILDVIKEINLTENAIDCPVPKMKMNEKGKKALDMLRVRLIQLFKYPIIMSQVMPPEFIHEAAEIFNQGAKRKSESRNIGKSGKRQKIQESHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01392694;
90% Identity
-
80% Identity
-