Stip008446.1
Basic Information
- Insect
- Synanthedon tipuliformis
- Gene Symbol
- Zmiz1
- Assembly
- GCA_947623395.1
- Location
- OX392415.1:7614116-7628057[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.13 9.5e+02 -0.0 0.9 4 24 556 576 553 581 0.88 2 2 1.2e-25 8.9e-22 76.9 4.6 1 50 639 688 639 688 0.98
Sequence Information
- Coding Sequence
- ATGTCGAGTGCGCGGGGTGGGGCAGAGAGCCGATACAGAGCTATGACGATGGTGGCGCCCGATCCCGACCGAGGACCGAGTGCCGAGACTGCCGAGTGCCGAGACGGACGACGATGTACGGGCGGGGGAAGCGGGGGTGCGCCACTCAATCGCAGCGAGCTGGCAACGTCGCGCGGGGTGGGAGCGCCCCTCGCCGCAACCTCTCACCGTCGCTGGATCGCCATCGCCAATATCGCCATCGCCAGTGTTACCTTTGGCGGTCGAACGCACGGTCGTTCGCCGTCAGTGACGTCGGTGTCGACACTCGTGCAACACGAGGGTGGCGTTTTGACCGACAGGACGGCGAATTCTAGTAATACGTCTGGATACGCGGGATCCGCATTCGCATACGCGGGAGCACAAGCTCCCGATATTGGAAAAAACAGCCATCTGCTAGGAAACATTGGATACAGGAATAACGCCACTAGCGGCTATGGGTGCGCCGGCGGTTCGGGCGCGATGAGCGGCGGGGGCGAGAACGCGCAGTTCGGCGCCACCGCCGCAATGGTCGCCGCGGCCACCACGGCCGCGATGCAGGACTCGCAGCCATTCTCGCAGATGCAGAACAATATGACGATGGGAAATCCCCAGTATGGCGCGATGAACGGCTATGCTCAGCAACGAAATCATAACCCAGCCATGACAGGAATGGGAATGGGTGGAAACAGTGCCATGAATGGAATGGCAGGAATGACTGGCTTGGGCCAAATGGGAAATGCGAACATGAATGGCATGAATCCTATGGCGCAAATGGCTAATATGGGCATCCACACTAATATGATGTCGTCACAAATGGGCCCCGGGCCGACGATGTGCGGTACTGCTAAGATGGGTCCCGGATATCAGAGACGGCATACGCCGTATCCTTCGGGAACGATGCTTATGGGACAACGAAAAGGACAGTATATGGGAGGTCAACCGGCTTTTGGTCCCGGGCAGTATCCTACTGGATACAATGGTAGACCAAGCTTTCAAGGACAGTATCCACCGCAACAGCCCTTAGGTCCGAGTGGTAATTTTGGAGCTACAATGAGAGGAAACATGAGACAGTCGACTCCACCGTATTCCAATCAAGGCCAATATTTTAATGGGGGTGTTCCTGCCCAATTTCCGCAACATCAAAGTGGCAACACACAATACGGTGGTACAGTACAGTATAGCGGGCAATTCGCTCAGGAAGTTGCAATGCGGTCTAACATGAGTTATCAGCATAGCCCTGAACCTGGAAATCCAACGCCACCTTTAACGCCAGCGAGCAGTATGCCGCCTTACATAAGTCCCAACGCGAATGTGAAGCCACATTTTAACGAGCTCAAAGCTCCAATGAGTATGCAAAATGACGAGCTCCGGTTAACATTCCCTGTAAGAGATGGTATAATATTACCACCATTTAGATTAGAACACAATTTAGCTGTTAGCAATCATGTATTCCAGTTGAAACCGACGGTTCACTCTACTTTAATATGGAGGTCGGACCTGGAGCTGCAATTGAAATGCTTCCACCACGAAGATAGGCTGATGAATACCAACTGGCCTGCCAGTGTTCAGGTGTCAGTCAACGCTACCCCCCTAATCATAGACAGGGGCGAAAACAAACTGTCACACAAACCATTGTACCTGAAAGAGGTGTGTCAACCTGGAAGAAACACAATACAGATCACAGTGTCCGCGTGTTGTTGTTCGCACCTGTTCGTCCTACAATTAGTTCATCGGCCGAGCGTCAGAAGTGTTTTGCAAGGGTTATTAAGAAAACGGCTACTGACGGCAGACCACTGCATCGCAAAGATTAAAATGAATTTTAACCAGACGACGAACAGTAACGGCGGAAATAACACGACCAGCGACAGAGACAGTATCGAGCAGACTGCCCTCAAAGTGTCGCTAAAATGTCCTATTACCTTTAAGAAAATAACACTACCCGCGCGCGGGCACGAGTGTAAACATATACAATGTTTTGACTTAGAATCATATTTACAACTTAATTGCGAACGGGGTTCGTGGAGATGTCCAGTTTGCAACAAACCAGCGCAGCTAGAAGGTTTAGAAGTGGACCAATACATGTGGGGAATATTGAATACGTTGAACAACTCCGACGTTGACGAAGTAACAATTGACAGTGGGGCAAATTGGAAAGCGTCTAAAACTGCTACCAATTCAGGCATTAAAGACGAAGACAGCAGTGACAGTGGCATCGGAAAGAGAGGCAAAGCGGTTTCGCCCGGATCTATGAACATGCCAACTATGAACAACTGGGACCAAGCACTATCGCCCTACCTTCCTCCCGACATGAACTCTATCGCAAGCGGATCAATGATCTCATCGTACAGCAACCAAAGTGCACAGAGCAGAAATTCAAGTTCCAACAATCAAAACTACGACTTTGGCATGAACAACGGTCCGGGAAGTAACGAGTTTGCTGGCAATGGACCTTTGTCACATTTGAACGATAGCGTCAACTCTCTGGACCCTCTTAATGCCATGGAAAAGAGTCTTAACGAACAGATGCCGCACACGCCACACACGCCACATACGCCAGGTTCTGCCCATACGCCGGGCGGCGGAGGCGGAGCGCACACGCCGGGCTCTGCACACACACCGGGGCCACCGTCAGTCGGCCACTCGCTCACTGATGTCGACATACCATCGGACCTCAACTTCGATCCCGCCGCTGTCATTGATGGTGAAGGCACTGATAATTTAAATCTGTTGCCAGAGACTAACGTCGACCCGATGGAGTTGCTTTCCTACTTGGACGCACCGGCACTAGGGGAACTCCTCGCGACGCCACCTTCCTCGTCTTCATCAGCAGGTAGCCACCCTCCGCGAGCGCCATCATCGGATGACCTGTTGTCTCTCTTTGAGTGA
- Protein Sequence
- MSSARGGAESRYRAMTMVAPDPDRGPSAETAECRDGRRCTGGGSGGAPLNRSELATSRGVGAPLAATSHRRWIAIANIAIASVTFGGRTHGRSPSVTSVSTLVQHEGGVLTDRTANSSNTSGYAGSAFAYAGAQAPDIGKNSHLLGNIGYRNNATSGYGCAGGSGAMSGGGENAQFGATAAMVAAATTAAMQDSQPFSQMQNNMTMGNPQYGAMNGYAQQRNHNPAMTGMGMGGNSAMNGMAGMTGLGQMGNANMNGMNPMAQMANMGIHTNMMSSQMGPGPTMCGTAKMGPGYQRRHTPYPSGTMLMGQRKGQYMGGQPAFGPGQYPTGYNGRPSFQGQYPPQQPLGPSGNFGATMRGNMRQSTPPYSNQGQYFNGGVPAQFPQHQSGNTQYGGTVQYSGQFAQEVAMRSNMSYQHSPEPGNPTPPLTPASSMPPYISPNANVKPHFNELKAPMSMQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHSTLIWRSDLELQLKCFHHEDRLMNTNWPASVQVSVNATPLIIDRGENKLSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKMNFNQTTNSNGGNNTTSDRDSIEQTALKVSLKCPITFKKITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNNSDVDEVTIDSGANWKASKTATNSGIKDEDSSDSGIGKRGKAVSPGSMNMPTMNNWDQALSPYLPPDMNSIASGSMISSYSNQSAQSRNSSSNNQNYDFGMNNGPGSNEFAGNGPLSHLNDSVNSLDPLNAMEKSLNEQMPHTPHTPHTPGSAHTPGGGGGAHTPGSAHTPGPPSVGHSLTDVDIPSDLNFDPAAVIDGEGTDNLNLLPETNVDPMELLSYLDAPALGELLATPPSSSSSAGSHPPRAPSSDDLLSLFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357101;
- 90% Identity
- iTF_01386404;
- 80% Identity
- -