Basic Information

Insect: Synanthedon tipuliformis
Gene Symbol: ZFX
Assembly: GCA_947623395.1
Location: OX392436.1:241368-244914[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0018 0.1 13.3 0.2 1 20 113 132 113 134 0.93

2 16 0.016 0.93 10.4 0.0 1 23 165 187 165 187 0.97

3 16 6.9e-06 0.0004 20.9 0.2 1 23 192 214 192 214 0.97

4 16 0.88 52 4.9 3.3 5 21 220 236 218 237 0.92

5 16 0.00027 0.016 15.9 0.5 1 23 250 273 250 273 0.96

6 16 1.1e-05 0.00067 20.2 2.1 1 23 279 301 279 301 0.98

7 16 0.0022 0.13 13.0 0.9 1 23 335 358 335 358 0.97

8 16 0.0004 0.023 15.4 0.8 2 22 487 507 486 510 0.89

9 16 0.2 12 6.9 0.6 2 23 541 563 540 563 0.91

10 16 0.00011 0.0062 17.2 2.4 2 23 569 590 568 590 0.96

11 16 0.19 11 7.0 1.9 3 21 595 613 594 614 0.92

12 16 0.00017 0.01 16.5 1.3 1 23 640 663 640 663 0.95

13 16 0.0045 0.26 12.1 2.1 1 23 669 691 669 691 0.95

14 16 0.066 3.9 8.4 0.1 1 23 697 719 697 719 0.97

15 16 0.0018 0.11 13.3 1.4 1 23 725 748 725 748 0.93

16 16 5.9e-05 0.0034 18.0 1.4 2 23 755 777 754 777 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0018	0.1	13.3	0.2	1	20	113	132	113	134	0.93
2	16	0.016	0.93	10.4	0.0	1	23	165	187	165	187	0.97
3	16	6.9e-06	0.0004	20.9	0.2	1	23	192	214	192	214	0.97
4	16	0.88	52	4.9	3.3	5	21	220	236	218	237	0.92
5	16	0.00027	0.016	15.9	0.5	1	23	250	273	250	273	0.96
6	16	1.1e-05	0.00067	20.2	2.1	1	23	279	301	279	301	0.98
7	16	0.0022	0.13	13.0	0.9	1	23	335	358	335	358	0.97
8	16	0.0004	0.023	15.4	0.8	2	22	487	507	486	510	0.89
9	16	0.2	12	6.9	0.6	2	23	541	563	540	563	0.91
10	16	0.00011	0.0062	17.2	2.4	2	23	569	590	568	590	0.96
11	16	0.19	11	7.0	1.9	3	21	595	613	594	614	0.92
12	16	0.00017	0.01	16.5	1.3	1	23	640	663	640	663	0.95
13	16	0.0045	0.26	12.1	2.1	1	23	669	691	669	691	0.95
14	16	0.066	3.9	8.4	0.1	1	23	697	719	697	719	0.97
15	16	0.0018	0.11	13.3	1.4	1	23	725	748	725	748	0.93
16	16	5.9e-05	0.0034	18.0	1.4	2	23	755	777	754	777	0.95

Sequence Information

Coding Sequence: ATGATTTTATACTATTATCACGTGAAGGAAGACAACGGACTGCCCAGCGGTGTATGTCGCCTTTGCTACGAAGAAACGATAGGCGCCGCTCACTTTAGACAATTTTGCACCAGCTCTGTAACGCAATGGACGAAAACCATCGCGTTACTCGCCGATATCAAAGAACCATTGCCCGAAGATAAGGCTTTTTACGTGTGCCTCCAAGACGATGTGGCAAAACTGATCAGAGAACAAACAAACAAGAAGGAGGCTGTCTTAAAAGGCGCAGTAGATGAGAGGAATAAAAAGTCAAAATCCAACAATAGGATGAAGAAGAAACTCGGAAATGGTTGCAAATGTAAATGCCCGGATTGCGGAAAAGAGTTTCTTTATCCTTATTATTTGAATGTACATTTGGCTGGCGGTAAGAAGACTGCGTGTCTCGTCTGCGGAATTGTCTTAGTCAGTGATAAAATATTGAAACACTACGCGAGGCGACACGGCGATATTAAATTCATTTGCCAAATTTGTGGAGTGATTTTTGATGAGGAGATTATGTTAGAAGAACACCAGGCGAGTCATTCTAAGGGGCCATATAAATGCGCAGATTGTGGCAAGGAGTTTCCGAGCAAACGCGGTCTGCAAGCTCACGTATACTCCCACAGTCTATTCAATTGCGATTGTGGGAAAAATTTCGAGAACAGAAAGTGTTTTAAGTATCACAAGAAACGTTGCATTAGATTTCGCGATAAAGTGTACGATTCGCTGTTCGTATGCGATCTTTGCGGTAATAAATACTCAAAGAAACCATCACTGACTGCCCACATGTTGCAGAAACATATAAACGTGCTTCCGTACGTTTGCGAGACGTGCGGAAAGAGGACTTCGACTCTGAGTCATCTGAGGACTCACGAGTTGACTCACGCGAACAGAAGAAGAGTGTTTCAATGCTTGTGCGGTTCAAAGTTTCTAACGGAACTCGGGTTTCAGCTCCACCAAAGAGTGCATACGGGAGAGAAGCCTTATGAGTGTGAAAGTTGCGGTGAAAAGTTCATATCGAGTTCGAGAAAACAAGATCACATAAAACGTAGGCATACCAGTTCTGAAAACAAGCCACACGGCTGCTCCATCTGTTTCACGCGTTTCCTTAACGAGGAACCGATGCGTCCACACGGCGTTTGCGTCTCGTGCGCAACCGCAGCGATCGCCGCACAAGAGTTGCGCTTACTCGTCATGCAATCGCAAAAATATTGGACAGACGCAACCAAATCCCTCTCAGAGATACCCTTCAAGGCTCACGCTCACGTGAAATCGTTATTCGGATTCATAGACCCCGATAGCCTATCGCTTCACATAATTGAGAACTATCAACCTATGGATCCGGACAACACTTTGGTATTGCTAAGCAACCATTCGAAGAGAAAGCCGCAGGCTTCCGAAAGAAAGCAGAGAGTTCCAAGAGGCAACGGACCTACTTGCACCTGCGAAGACTGCAATAAAGTCTTCCCGAGTCCTTTCTACTTGGACGTCCACCTGAAGAATAGTGGACACAAGGAAGCTTGTCTCATCTGCGGTGTGATGATGGGCAGAGGTGGACCCATGAAGGATCACATGTTTTCAGAACACGGTGAAAAGATGATTATGTGCAATGAGTGTCCGTTGCTGTTCAATAATGAATCTGAGCTGAAGTTTCATAAGAAGAATAACCATAAACCTGGTGATTTGACGTGCAATCAGTGCGGAAGGACGTTTAAAAGGTTGACTACATTTGAGAATCATTTTCAAATGCACACAGTCAATATATGTAGGACTTGCGGCTTACAGTTCACCAATAGAGGATGTTACCGCGAGCACAGGTCCAAATGTGAGCCGAACGCTAAACCTGATATCCAAACTGTGCCCAGAAGTAAGAGGTCTAACATACGAGATCCAGCTACGTTTACGTGTGATTATTGCAAAAAGACTTATCTATCGCGTTCTCAGTTGAAAAATCACATTTTGTGGATACATATGGACGTTAGACCTCACCAGTGTTCTTCATGCGGAAAGAGGTTTTATACAATGTCTCGCCTCCTCGAGCATACAGTGGTTCATACGCGCGTTAGAAATTTCGAATGTGACATTTGCGGTGTCAAGTTGGTTTCCAAGATGGCCGCCGTGTACCATAGACGAAGGCACACGGGCGAGAAGCCGTACAAATGTGAGGATTGTGGTGAAACGTTCATTTCGTCGTCGCGTCGGTCGGAACACTCGAAAAGGAAACACAATAAAGGGGTTAAAATTAAGTGCACGCAGTGTCCGGCCAAATTTGTTAGGAATCATGAACTCAAGAAGCACATGGTGAAAGCTCACTGGAGCGGAAAGCAAGAAGTGGATGGTGTTCCTGGGAAGAAAAAATTAAAGAATAGCCAGACATAG
Protein Sequence: MILYYYHVKEDNGLPSGVCRLCYEETIGAAHFRQFCTSSVTQWTKTIALLADIKEPLPEDKAFYVCLQDDVAKLIREQTNKKEAVLKGAVDERNKKSKSNNRMKKKLGNGCKCKCPDCGKEFLYPYYLNVHLAGGKKTACLVCGIVLVSDKILKHYARRHGDIKFICQICGVIFDEEIMLEEHQASHSKGPYKCADCGKEFPSKRGLQAHVYSHSLFNCDCGKNFENRKCFKYHKKRCIRFRDKVYDSLFVCDLCGNKYSKKPSLTAHMLQKHINVLPYVCETCGKRTSTLSHLRTHELTHANRRRVFQCLCGSKFLTELGFQLHQRVHTGEKPYECESCGEKFISSSRKQDHIKRRHTSSENKPHGCSICFTRFLNEEPMRPHGVCVSCATAAIAAQELRLLVMQSQKYWTDATKSLSEIPFKAHAHVKSLFGFIDPDSLSLHIIENYQPMDPDNTLVLLSNHSKRKPQASERKQRVPRGNGPTCTCEDCNKVFPSPFYLDVHLKNSGHKEACLICGVMMGRGGPMKDHMFSEHGEKMIMCNECPLLFNNESELKFHKKNNHKPGDLTCNQCGRTFKRLTTFENHFQMHTVNICRTCGLQFTNRGCYREHRSKCEPNAKPDIQTVPRSKRSNIRDPATFTCDYCKKTYLSRSQLKNHILWIHMDVRPHQCSSCGKRFYTMSRLLEHTVVHTRVRNFECDICGVKLVSKMAAVYHRRRHTGEKPYKCEDCGETFISSSRRSEHSKRKHNKGVKIKCTQCPAKFVRNHELKKHMVKAHWSGKQEVDGVPGKKKLKNSQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01387842; iTF_01386983;
90% Identity: iTF_01387842; iTF_01386983;
80% Identity: -