Stip001606.1
Basic Information
- Insect
- Synanthedon tipuliformis
- Gene Symbol
- SNAPC4
- Assembly
- GCA_947623395.1
- Location
- OX392427.1:1399722-1401914[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.4 2.6e+03 -1.1 0.0 4 18 166 180 164 181 0.89 2 5 3.7e-10 2.8e-07 30.8 0.5 1 45 273 319 273 320 0.95 3 5 3.1e-09 2.4e-06 27.8 0.2 2 44 327 373 326 375 0.94 4 5 1.1e-06 0.00084 19.7 0.0 1 41 379 419 379 421 0.95 5 5 4.6e-06 0.0036 17.7 0.0 3 45 430 474 428 475 0.90
Sequence Information
- Coding Sequence
- ATGGAATTTAATGACAATTCATTTGACTTGTCCGAAGTCGACATGAACTCGGACATCGATGAGGAAAAAATGAGTATAATAAGAATATTACACGATCTGAAAGTCGCCAGAGTGGTACATAATAGGTCGTCTATGTGTTCGGATTACCCAGGTACTAGTTCATACATAGATACCAGGTGCCCTTCGCCGGAACCGTCTGAACAAGAGAAAGTTTCCAAGGCTCTACAACTGAACTTATCACTAGACGAAAAATTAAAGGAACTTAGCGAAATATTGAGCGAACGACTTGTTATTTGTCAACAGAAGTTAACAGAGATTGAGGCGATCAGAAGAAACTTCAAGAAGGAAATTAAGGAAACGCCAAACAAATATGTTATAAGTTCTAGATCTTACTTTAAAGATAAAAAGAACTTTCCGCCTCCAGACAATGAGGATACGATTTTTATGTTAAATAATGAGATGTATGATTTCCGCGAAGTAGCATCGGTGCCCGGTTGGACAGTCACAGATCAGAGAAACTTTATCAAAATGATACGCCGCATGTCTATAGAAATCGCGAGAAGTAAGTTAAATTCGCAAATAGCAGCATTAAAACGTAGCTACAAAGATGCTATAACGTCAGAAAAGGCAAATATCAGAAAGAAAATGGCTGCACTCAAGGAAGAGATTGACAATGTTCCTAATAAAGAACTTAAAGATATAGCACTCCCAATACATGAAGACTATGATTGGGACAGGGTTCATAAATTCTTAGCAAGACATACTCCCGAGGAATTTGAGTTCCTTTGGAAGATCTGTTTGCATCCATCTATAAATAAGAGCAAGTGGAGCAGCGAGGAGCACACTTCGTTGCAAAAAATAGCAGCAATGAATAATCATGAGAATTGGGAGAAAATTGCGAGAGAATTGAACACAGGCAGAACTGAATATCAATGCTTTGTATACTACAGAACTAATGTGTGCAATTTAGGTATTGGTCAAAAATGGACACCGGAAGAAGAGCAGTACCTTATGAGACTAATCAGGTATTATAAGGAGGGTCAGAATATTAACTGGGGCAAAGTAGCCTCCTGTATAGATAATAGAACAAAAATGCAAATTTACAACAAGTACTTTAGACTGATGGAAACTAGAAAGGGAAGGTTTGCTCAGGAGGAAGATGCGGTTATACTCAAAGGTGTGGCAGAATTTGGTGCAAACTATAGGTGCATGCAGAAATTTCTACCGGGTCGCTCTGTATCGCAATTGCGTATTCGACATAAGTTATTGCAAAAGAATGAAAAAATACCATGGACCACGAGAGAAGATAAAATTCTAATGAAACTAATGTTGGATAAGAATTTTGAGGGAGGTTTTTCCAGAGTTACCGAGTATTTGCCTGGAAAAGACAGAATCAATATCAGATCGAGATTTAACACTTTAATGAAATGGATGAAAGCCAACCCTAATTTGGATTTGTCTAAAGCTCCCCGACGAGTAAGGAAAGTTGAAAGACAGACCATAGAGAAAGAAGACTTTGGTACAGTTATTAGGAAATTACAGAGAAGATTGAGGAGTGAAAATGATTGTGGAGATCTTTCCGATGACATGATTGATGATATCGATGATAGCATAACTAAAGTAATTTTATCCAAAGATGATACGACATTAAAAGGCTTGGAAGATAAATTGGAAGAGGCACTTGCGAAAGGTTGTCCTACTGTTGACACGACAAATTTGAAGAAACTGTTTTTGCTTTTTAAGGTAGTTTTTGATAGGGAACAATTTCAACGCAGTATTTACAAGGAGAAATATCCGAGTTTGTTAGAGAAGGAACGTGTACTAACAGTGAAATCTTATTCAAGAAAGACCAAGAATCATACCATGAGTACAGATTGCGGGTTGGACATATGGGGCAATGCAAAATTGGGCAATTCAGACTATGTCCTTCCTCCGAACTTATCTACGATATGTGGTCTTCTAAGGTTAATTAAATATTGCAATGATAATAAAGACGATAAATGTGCCGTTAATACTTCAGTTTTGATTAAAAAAAACCCAATGCTTAGACAAAAATTTTATCTTCTCCAAGAGAGATTTACTTTTCTTTTCCTGTGGCCGTTTCTTTTAAGTAAGAATCCACCGAAAAATTTACCATCTGATGGTTCAAGTAAGGAAGCTACTGTAAATAGTGAATATTATCAAAATACTTAA
- Protein Sequence
- MEFNDNSFDLSEVDMNSDIDEEKMSIIRILHDLKVARVVHNRSSMCSDYPGTSSYIDTRCPSPEPSEQEKVSKALQLNLSLDEKLKELSEILSERLVICQQKLTEIEAIRRNFKKEIKETPNKYVISSRSYFKDKKNFPPPDNEDTIFMLNNEMYDFREVASVPGWTVTDQRNFIKMIRRMSIEIARSKLNSQIAALKRSYKDAITSEKANIRKKMAALKEEIDNVPNKELKDIALPIHEDYDWDRVHKFLARHTPEEFEFLWKICLHPSINKSKWSSEEHTSLQKIAAMNNHENWEKIARELNTGRTEYQCFVYYRTNVCNLGIGQKWTPEEEQYLMRLIRYYKEGQNINWGKVASCIDNRTKMQIYNKYFRLMETRKGRFAQEEDAVILKGVAEFGANYRCMQKFLPGRSVSQLRIRHKLLQKNEKIPWTTREDKILMKLMLDKNFEGGFSRVTEYLPGKDRINIRSRFNTLMKWMKANPNLDLSKAPRRVRKVERQTIEKEDFGTVIRKLQRRLRSENDCGDLSDDMIDDIDDSITKVILSKDDTTLKGLEDKLEEALAKGCPTVDTTNLKKLFLLFKVVFDREQFQRSIYKEKYPSLLEKERVLTVKSYSRKTKNHTMSTDCGLDIWGNAKLGNSDYVLPPNLSTICGLLRLIKYCNDNKDDKCAVNTSVLIKKNPMLRQKFYLLQERFTFLFLWPFLLSKNPPKNLPSDGSSKEATVNSEYYQNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01385699;
- 90% Identity
- -
- 80% Identity
- -