Stip015600.1
Basic Information
- Insect
- Synanthedon tipuliformis
- Gene Symbol
- ARID5B
- Assembly
- GCA_947623395.1
- Location
- OX392436.1:589032-602508[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-17 2.8e-14 53.5 0.0 3 89 224 310 222 310 0.87
Sequence Information
- Coding Sequence
- ATGGACGAAGTGCTCGCCATAAATGACAAGGTGGTGGTGCGAGCCGAGGACCTGCTCAGCTGGATGTGCGACGGGTCGGACTGGCATTGGGGCTTGCGTGCCGTGTGGCGTGGCGCGTGCACAGCGCCCGCCGACCCTCGGACCACGCAGCCCCTCCACCACACCAAGCTCGACTTCGCCGATGTGGAGAAGGAGAAGAACGCCATAGTGGACCCCGAGAGCCCCGGAGTGGTGGTATTCTCTTACCCCCAATACTGTCGGTATCGCGCTCTGCTCGCAAGGCTGGAGGGCATCCAGGCCGACTGGCTGAGGGACTCGCTAGTCGCAGCGTTAGGAGGTTATGCAGCACCCACCAAAAACACTAGGATACTATATTGTAAGGACACATTCGAATACCCGGAGCTGGAGGGCAACGAGTGCGTGTGCAACCACCTGGCGCCCAAGCTGAAGGGCAGGCCACGGGGCAGACGACGCCGCAGAGCTCGCTCCAGGTCCGACAGCCCCTCGTCCAGGTCCAGCGACAGCGATGTCAAGGAGGACATCAAGGAGATGCCCAGGGTCACGACCTCTCGGCGACTTTCCCTCCGCAACGGTGCCCCAGAGCGGGAAAGAAAGAGCGAGGAGGATGAGGAGGATATCTTCAAGACGTCAGAGACGACGTCCGAAGACCGAGCATTCCTGCAGCAGCTCAAGAATTTCTACAAGGAGAGGAACGAGAGCGTCAAGATAGTCAATTCTTTAAATGTGTCACTGCGTCGTCTGTACACGAACGTTGTGAGTCGCGGGGGATACGAAGCCGTGTGCAGACACAAGCTGTGGCGGTCTGTTCACACCGCTCACCCCTCGTCGCCACCCCTACTAGCTCTGCCCACCCCTGACCAGCCTGCGAGAGTGCGGAGGGTGTACGAGAGATACCTCCTACCGTTTGAAACTTACGAGAGGCGGAACGGACTCAAACTGAAAATATCCAATGGAAGAAAAGAACCAACGACCATAGACACGATAGACGTGACAGACTCGCCACTGCGCGAGGATACCACAAACACTCTAGATATAAAACACAATACGCTCAGAACGCCGAGTCCTAAACTGGAAAAGGAACTGAGCATAGACCAAGAGACTGGTGAACCGCAAAAGGATGATCTGAACATCATAGTTAAACCAGCCGAAGAATTGAACAGAGAATTCCTAGAGTCTCTGCCCAAGGAGGATGAGAAATTCAAGATAACCATAAAGCCAGTAGAGAAATTGATAGACAATAATGTAATGAGCATAATTAGTTTTCTACAGAACGTCGATGTGGTGAAATTGTTTGAGGACAATTGTGTTTTGATAAACGAATTAGTGGTTAAACATAATTTGACGGACTCTAGTAAAGTGATAGACGAAGTTGGGAGGCAACAGGTCAGCGATGCGAGTGCCATGTTTTTGAAGGAGTTAGCGCAGAAGTTAAATCTAGGTAATATTGAATATGGGCAGCAATTAGGTGTAAGTGAAGCGCAAAGGCAGATGTTGGTCGGTGAGGGGCAACTCGGGCAGGCGCCGGGGCAAGGGCAGCTAGGGGCATTACAGTCACTATCAACATTAGGCGATAAATATGCAGTCAACGGACACACGTCGGTCTCAGTGTCCACACACACCAATACTGAGCAGGTGCGACCGGCCGGTCGTAGTTCGCTGCGAGCTGTGAGAGTTAAGCCGACTAGACAGCCACACGCACAAACACCTCCCATTCCTCCGGTACGGTCTGACAGTTCGGGATCTCCTCCCGGCGTACCCCCGCTCAATAACTTCGGGATCCACCGTCCACCTTCGCAGCCAACAACACTAAACAACAACAGTGATGATGAAATTGTCGAGGTACCATACAAACCGAAAACACCGGAAATAATCGACCTCGACGAATATCCCGAAAGTCCCCAGGGGGTCAAGAAGAAAAAGTTGGACATCTTAAAAGAGAGAGGTCTAGAAGTGACTGCTATACCGACCGCCCCCGCTTGGGGCACGATTCCCCCCGTAATCAACCCGATTGCCCCGCTCATCCCCAACCAGATGATACTTAACCCCGCCGTGCAACATCAAATAATGACTCAAGCGCAACTATTTCAAATGTACAACATAATACCGCCGAATTACGCGAACGGAATCCAACCGCCGAAAGTGATACAAGCGACCAGCGCGTTCGGTTCATCGGGCCCCGAGAAGACCGTGTACGGAAACCCAAAAGATCCATTCATGCCCCCGCCCCACGTTCTACTCGGTACCCCAATAAAGCCGCTAAGAACCGTACAAAGTACCCCAACACCGCCGCAGGACATTCTAGACTTGACGTGCAAAAACGCGAACGAATCCCCACAAAAGCCGGCAGTCGAAATAGTCAGGGTCCCAACAGTGCCCTCCCCAAAAACTCCAACACCACAGAATCTATCGAAAAATTATACATTGATCGATGGTAAAGCAGTGGTCGGATCGAATTTAGAGATAACACTAGTTAATCCAAAAAATCAAACTCCCCCAAAAAATAGGCAACCGCAAAAGCGTTCGTCAAACGGGAAATTTGTATCCGCGAAAACCCCAACGCCGCCAAAAGATTACCCCAAGTCGTGCGGTGCCGGTGCCCCTACCCCACCCAAAAAACCCCCAATAGTCGTACCCAACTATCAAATAAACAGGGACGACGTGTCGCCAACAAGCTCGACCGGTTCCAGAGATTCTCAAAGTTCGAATTTTATGAAAAATCATCAAAACAGTTTAGCTCAAATGATGGACATGCAAAAGAGTGCAGTGCCAAGTTTGAATCCATTCATAGACCCGATATACATGAGCGCTCTGTACAGCAGTCTAGCGGGTCAAGTGGACCAAAGACAACTAGCCGTTTACAGGGACCTGATGGCCAACCAAGTTAGGGGTTACTCGGGCTTGTTGAATATGGGGGTAGCGACGCCAACAACGAAAAATTAA
- Protein Sequence
- MDEVLAINDKVVVRAEDLLSWMCDGSDWHWGLRAVWRGACTAPADPRTTQPLHHTKLDFADVEKEKNAIVDPESPGVVVFSYPQYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGNECVCNHLAPKLKGRPRGRRRRRARSRSDSPSSRSSDSDVKEDIKEMPRVTTSRRLSLRNGAPERERKSEEDEEDIFKTSETTSEDRAFLQQLKNFYKERNESVKIVNSLNVSLRRLYTNVVSRGGYEAVCRHKLWRSVHTAHPSSPPLLALPTPDQPARVRRVYERYLLPFETYERRNGLKLKISNGRKEPTTIDTIDVTDSPLREDTTNTLDIKHNTLRTPSPKLEKELSIDQETGEPQKDDLNIIVKPAEELNREFLESLPKEDEKFKITIKPVEKLIDNNVMSIISFLQNVDVVKLFEDNCVLINELVVKHNLTDSSKVIDEVGRQQVSDASAMFLKELAQKLNLGNIEYGQQLGVSEAQRQMLVGEGQLGQAPGQGQLGALQSLSTLGDKYAVNGHTSVSVSTHTNTEQVRPAGRSSLRAVRVKPTRQPHAQTPPIPPVRSDSSGSPPGVPPLNNFGIHRPPSQPTTLNNNSDDEIVEVPYKPKTPEIIDLDEYPESPQGVKKKKLDILKERGLEVTAIPTAPAWGTIPPVINPIAPLIPNQMILNPAVQHQIMTQAQLFQMYNIIPPNYANGIQPPKVIQATSAFGSSGPEKTVYGNPKDPFMPPPHVLLGTPIKPLRTVQSTPTPPQDILDLTCKNANESPQKPAVEIVRVPTVPSPKTPTPQNLSKNYTLIDGKAVVGSNLEITLVNPKNQTPPKNRQPQKRSSNGKFVSAKTPTPPKDYPKSCGAGAPTPPKKPPIVVPNYQINRDDVSPTSSTGSRDSQSSNFMKNHQNSLAQMMDMQKSAVPSLNPFIDPIYMSALYSSLAGQVDQRQLAVYRDLMANQVRGYSGLLNMGVATPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01385495; iTF_01386508; iTF_01387406;
- 90% Identity
- iTF_01387406;
- 80% Identity
- -