Stip004044.1
Basic Information
- Insect
- Synanthedon tipuliformis
- Gene Symbol
- jarid2b
- Assembly
- GCA_947623395.1
- Location
- OX392409.1:5149396-5167758[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-20 3.8e-17 62.7 0.0 6 89 1190 1270 1186 1270 0.93
Sequence Information
- Coding Sequence
- ATGGTTTTCGATGAATTTGCCAAAAAAATATACCAAGAATGTTTGATTATGCCTAAAATTATAAAATCATCATGTCGGAAAGTGCAAGCACAGCGAAAATTTGCCCAAGGTGCCTTTATTCCACCAAATATAAGCAATATACCTGAACGTCCTCAGCGCGTTTTGGATCCTTCAAGCCAGGAGCATCATGTGTACCAAAGTAACATGAAAATATCAACATTACTTGACGTAGTCACATTTCGTAAGTTGCACCCTCATGCAAATCCAGTTGTGTGGCTTAATAGGCTTGACTTAGAAACACTAGTTGATGAAGATGGAATGGAAATTTCTGTGCCTCCCTTTGAAGAACATAAGTCTGAGAGGAGAACACTGAGGATGATAGATTCGTCACCATCCACAACACTCGAGGAGTCACCAACTAAATCTTCCCCAATAAAATCGTCACCTATAAAGGCTTCGCCACAATCATCGTCCCCGACAAAAATGGCGACTCGTAAAAGAAAGTCAACTGAAATAGGTGCATCCAAAGTGACTAGGAAACATAGGTCTATTGCGATGTCTGCTTCACCATCGAAAAGGAGATCAAATACAGATGATTCGAATATGTTAAATGAAGATACAGATGATGATCGCCCACTTAAGTATTATATCAAGAAGGGCATGACTCGACCAATCAACAAGATTAATAGGCCCAGGGTTGTCACAAGGAGTTCAAGAGGTTTACTTAAATTCAAAAAGACACGTGCAACTTTGAGACTATTGAAAAAGAGGAGTACAATTGTTTCATCTGTTACAAACGCCGTTCGCAGAGAAGATAAACTATCCATTCGCCGCAGATCTCTGAAACAACATCCGAAACGACAAGGCAAGTCGATAGACAGGCTGACGGCAAAACCAAAGGTCGGTGCTGCATATGCGCTGCCGACCATAGTGGGATTAAGGATAACAAAATGCAGTCTATTTAAGATATACTATTTTACTGTTTCAGAACAACAAACACAAAACAACATATCACTTCGTTCTCGTCCAGCTGAAGTCAATAAATGCACAAAAACACAAGATGATAGTGCGACATATCCAAAAAGGAAGTCTTTGAGATCTCGATCATCAGATTCTTGCGGTGTCAGTATTTTGGATAAAAATGTTGGTGTAAAAAAGAGAGTGGCCACCGTGGTAACGACAGCAAAAAAACTTAAGCCTAAACTTCGCAAAACGTCTATATTAATAAACGAGGATGTTAGCGATACAAAAGAGAGTACTGCAAACAGTTCAGCTGAATTGTCTGTCAACGTGTCTGTTCCAACAGAAATTTCATCTATTGAATCCAAAAAGGAAATACCACTTTCACCTCCATCCCAGCATGTGGTGCAACAGAGATCAAATAAGGCTGAAACTTTTCCAAAAGTTACGTATATATCATCTCCAGTGCTTAAACATGAACCCGTTTTACCATTAAATGCGTCAACACTTCCAACTTTACCAAAAGTGGCTAAAATCATACCTTCGACAAGTGGACAATCTTTATCATCCTTACCTTTATCTAACACCAATAGCGATATCCAGTCTCCTCCGAAGATTCCATGTGTACCATTGATTCAAGTACCAAGTCAACCTTCTTCGTCAAGCAATATATGCCTAAAAGAATGTTTACCTTCGAGCTCACAACAAAGCACAAACCAAGAAGGCGATGATTCTCGAAAAAGCTTGCAAAGTTACGATACTCAACGTAAAAACTTTCAGGGTTATGACATACAAAGTTGGTTAAATGCGATGCCGCATATGACATCCATGTCAGACGAAGACGAGATCGATACATTTAAAGCTCCAAAGAAACCGAAACGAACAAAACTACCTCCCACAAGGGAGTCAAGAAATGATCGGATCAGGAATGCAAATGAGACAAGGGCTTTAAGCAAAGAGGAAGTAGAAAGTAAAATTGAACCTGCATTGGCTTTTGTGTGTGATGCTACTAATATGATTTCTCAGTCCAAACTAGAGCCCACTAATGGTGTGAGAAGTGCTGAAATTCAAAATAAGGACAAAAGCAAAGAGCTAACAAATAGTGAAGACATCAAGCCGAGTGGACATTGTGACTTTAAACCTCGAGAAGAAAAAGCACAACAAATTCAAGCTCCAAAATCGAATGTTTACGATTTCGATGTAGAAAACGATGATACTGAACCAAATCCTACCTTGTCGATGTACAGACGTGGTACACGTGCTTCAATAGAAACATCTGAAAATCTACATCTACATTCCCATAACACTCCCACGATATATTTGGATCCTAGATTATCGTCGATTCCAAACCATGTCATTGAAATAGGAATGTCTAAGAAAACGGAAATGTCTGAGTGGAAAGCGCGACTTGTACCGTTGTCGAAAGTGAACAGAAGCAGCATATCGATGATTTACGACGACTCACTGTTTGATAATATGAACAGCAATTCTCAGGCGCCAAATTGTGAAAGAGAAGAAAATTTCAATTTGCAAATCGTTCAGCCGTTGTTAAAAGAGAATAATAAATCCGAATCAATTAAGACTAGTGATACCCAAGACAATAGAAATAAGGTAGAACAAAAGACTGCACAATCTGAAATTAAATCTGATCGTATCATTCCCTGCACTACTGAACAACGTAGCAAGGGTCAGAATAAAAATAATTTGGAAGTTAATACTCTAAATCTGGACAATCTTAAAGTTCAAATAAACGCTTATGATGCACCGGCGGTCATGAAAGTACCGGAGGTAAAAGATTGTACCAAAAAAATCTCTGATTCTGTTAAGTTGCCAGATGTATTATCTGGACTGACACAAATGTTGAAGCCGAAAGTTCAGACAGTGCCAATGCCGAAATTACCTGTTTTATCAAAAAGTAGCGCTCAAAGCGTCGACACTAATTCTTTGTCCCGATTAAATGCTTGTGTATCTGAACATCATAAGAAGTCTGACAATTTTAAATTTTACTTGGACCCTAAATTCACTTCGAGTCAAGAAAGTCAAATTATTGAGATAACTATGTCAAAAGCTAGTGATGGTGCCCATGTTCATGCACGTCTTGTATCTGCATCACAAATAAATGAAGACACACCTATGATAAAAGATCAAACTTCGTACGATCAGATGCTTAATAATCATATTGGCAATAGAAAAGTGCAGGAAATTAAGCCACCTATTGTACAAACCGAAAAGAATAATGAGCAAAGACCGAATTCACGGACAAGTCAGTCGAGTACCACTCAATCGACACAGTCTGTAAATTCCAGTTCCTCGTGTAGAAGATCCGGATCACAAAGGAGTAACAATCGCCCACTCGCTTATAATAGGACACCAACCAAGGCTAAAATTGTAGACGCGCCAGTGTTTTATCCAACTGAAGAAGAGTTCAAGGATCCTATTGAGTATTTTGAAATAGTAAAACCAATGCTCAAGAAGTTTGGATTGGGTAAGGTGGTGACTCCTGTTGGTTTCGCCCCCACGTGCTTGTTGGATGACCAAATGAGATTTAATGTGATAAATCAGTATATAGCAAGAATGTATGCCCGATGGGGGCCCATTTCTAGGGAAATGTGCACTATTAGAGCACATTTGGCTACACAAGGCGTGGTTTTCACAAGAGCTCCCTTACTCGACGGCATCGAGGTGAATCTGTCGAAATTGTATCATGTCGTACAACGACATGGTGGCCTTCGGGACGTGATACAAAGGAAGCGTTGGAGTAAAGTAGCCGAAGAAATGGGTTTACCGAAGGGACCCAAACTTGAAAAGAAATTGGATCAAATATATCTTAAATATTTGGTACCATATGACACATTGTCTAGCAAGGAGCGTCAACAAATAATGGCTGCCGTTGAACAATGTTGGAGTAAAAAATATAAACGTATGATCGACCGCGCATTGAACCCGTTACATAGGCAAAGGCGTTTGGTTGGTGAATCTGACTCATCGGACGAGGACGATGATGAGGAAACGTCAATGTTGGAAGGAGCATTACAGGAAGCGGAAGACTGTGTTGTGCCAGGAAGGAATATGAATTTAGCAACTTTCAAAAAAATCGCTGAAAAAGTAATGCATATGCGTTGGCCTAACTCCACGCCGTCTACGGAACGTATTGAGGCGGAATATTGGAATGTAATGCTGATGGGCTCGGACCATGAGTGCGTATATTCAGCATCTGTCGACACGAAACAGGGTTATGGGTTTGCCAACAGTGATCTAGATCCGCAAGGGAAACATCCATGGAATTTGAAGATGTTAAGCCACGATAAGGGTAACGTGCTTCGTTTCCTGGATTCAGTGCCTGGAGTATCGACTTTGCATCTCGGAATGATGCATTCTACGAGTTGTTTACATCGTGATCCTCACGGATTGCCGTTTACAGAGTATTTGCACGAGGGATCTCCTAAAATATGGTATGGAATTCCAGAAGATCAGAGTGAAAACTTCCGAAAGGCTGTGGAAACTCTCTGCCCATCGTACTGTCAGAATAAAGAAGTGTGGCTACCGTCTGACATAGCAATGATTCCACCCAACCAGCTTATTGAGCGGAACGTGGCTCTCACAAGGGTTGAACAGAAACCGGGAGAATTCGTGTTGGTTTATCCCCAAGCGTATTCCTGCTCCATTTGTACCGGGTACACTGTTTCGGAGAGTGCATATTTTGCGACCAAATACTGGTTAGACAATGCGTATCTCATTTTTCAGAATCTACGTGAAAGTTGCGAACCGACCATGTTCCCTTTGGAACAGATTCTATTATCGGCTGGCAGAGATGTGTCCGTGAGCCTTGAAGTGTTACATCGAGTGTATACTCCGTTCAAGACTATAGTCAAGGAGGAGCTGAGACAGAGACGCGCTTTGGAACGTATAGGTGTTCCAAGTCAAACACATCGACCACAAAAAGGCGACAAACGACGCACTCAACCGGTTTCACCTCGAGAACAACACGAGTGTGAGATTTGTCGGGCAACACTCTACCTTTCACATGTTACTGGTGTGACGGATAAAACATCGGCAATGTGCGTACAACATGCGTTACGTGTACTGAGTTCTCCGAAATACAAAGGGCGGAGTATGTCGTCAATAAGTCTCACATGCTTCTACTCGGCTGCTGAACTGGAGAACGTTTTAATGGATATCAACAGAAGGCTCGGCAAAGTTGAAAACATCAGTGTTGCAAACGACAAATATACAAAGACATCGCAGCCTTTGAAATTAGAAGGAACCTCATGA
- Protein Sequence
- MVFDEFAKKIYQECLIMPKIIKSSCRKVQAQRKFAQGAFIPPNISNIPERPQRVLDPSSQEHHVYQSNMKISTLLDVVTFRKLHPHANPVVWLNRLDLETLVDEDGMEISVPPFEEHKSERRTLRMIDSSPSTTLEESPTKSSPIKSSPIKASPQSSSPTKMATRKRKSTEIGASKVTRKHRSIAMSASPSKRRSNTDDSNMLNEDTDDDRPLKYYIKKGMTRPINKINRPRVVTRSSRGLLKFKKTRATLRLLKKRSTIVSSVTNAVRREDKLSIRRRSLKQHPKRQGKSIDRLTAKPKVGAAYALPTIVGLRITKCSLFKIYYFTVSEQQTQNNISLRSRPAEVNKCTKTQDDSATYPKRKSLRSRSSDSCGVSILDKNVGVKKRVATVVTTAKKLKPKLRKTSILINEDVSDTKESTANSSAELSVNVSVPTEISSIESKKEIPLSPPSQHVVQQRSNKAETFPKVTYISSPVLKHEPVLPLNASTLPTLPKVAKIIPSTSGQSLSSLPLSNTNSDIQSPPKIPCVPLIQVPSQPSSSSNICLKECLPSSSQQSTNQEGDDSRKSLQSYDTQRKNFQGYDIQSWLNAMPHMTSMSDEDEIDTFKAPKKPKRTKLPPTRESRNDRIRNANETRALSKEEVESKIEPALAFVCDATNMISQSKLEPTNGVRSAEIQNKDKSKELTNSEDIKPSGHCDFKPREEKAQQIQAPKSNVYDFDVENDDTEPNPTLSMYRRGTRASIETSENLHLHSHNTPTIYLDPRLSSIPNHVIEIGMSKKTEMSEWKARLVPLSKVNRSSISMIYDDSLFDNMNSNSQAPNCEREENFNLQIVQPLLKENNKSESIKTSDTQDNRNKVEQKTAQSEIKSDRIIPCTTEQRSKGQNKNNLEVNTLNLDNLKVQINAYDAPAVMKVPEVKDCTKKISDSVKLPDVLSGLTQMLKPKVQTVPMPKLPVLSKSSAQSVDTNSLSRLNACVSEHHKKSDNFKFYLDPKFTSSQESQIIEITMSKASDGAHVHARLVSASQINEDTPMIKDQTSYDQMLNNHIGNRKVQEIKPPIVQTEKNNEQRPNSRTSQSSTTQSTQSVNSSSSCRRSGSQRSNNRPLAYNRTPTKAKIVDAPVFYPTEEEFKDPIEYFEIVKPMLKKFGLGKVVTPVGFAPTCLLDDQMRFNVINQYIARMYARWGPISREMCTIRAHLATQGVVFTRAPLLDGIEVNLSKLYHVVQRHGGLRDVIQRKRWSKVAEEMGLPKGPKLEKKLDQIYLKYLVPYDTLSSKERQQIMAAVEQCWSKKYKRMIDRALNPLHRQRRLVGESDSSDEDDDEETSMLEGALQEAEDCVVPGRNMNLATFKKIAEKVMHMRWPNSTPSTERIEAEYWNVMLMGSDHECVYSASVDTKQGYGFANSDLDPQGKHPWNLKMLSHDKGNVLRFLDSVPGVSTLHLGMMHSTSCLHRDPHGLPFTEYLHEGSPKIWYGIPEDQSENFRKAVETLCPSYCQNKEVWLPSDIAMIPPNQLIERNVALTRVEQKPGEFVLVYPQAYSCSICTGYTVSESAYFATKYWLDNAYLIFQNLRESCEPTMFPLEQILLSAGRDVSVSLEVLHRVYTPFKTIVKEELRQRRALERIGVPSQTHRPQKGDKRRTQPVSPREQHECEICRATLYLSHVTGVTDKTSAMCVQHALRVLSSPKYKGRSMSSISLTCFYSAAELENVLMDINRRLGKVENISVANDKYTKTSQPLKLEGTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01386506;
- 90% Identity
- iTF_01386506;
- 80% Identity
- -