Stip008820.1
Basic Information
- Insect
- Synanthedon tipuliformis
- Gene Symbol
- cnc
- Assembly
- GCA_947623395.1
- Location
- OX392437.1:1314215-1335972[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-12 1.1e-09 38.4 8.7 3 64 413 474 411 477 0.91
Sequence Information
- Coding Sequence
- ATGCGTTCCATGTCGGTGGAGCAGCGTTGGCAGGACCTGGCTTCTTTGCTGACCATACCTCCGCCCCCGGACCAGTACCAGCATCACTATCACCACCAACATCCCCACAACATTAGCGCTCATGGCGCCCCCGGCGGATATGCACCGAACTATCACGCAGCGATACCTCCAGTGCCGGAAAAACATCCGGAGGTTTACGGCGCAGCGGCTCCGATAGAAGGCGCTTACAAGGTCGAGTCGGCGCACCATCCGCCCCAACACGACGGCATGTATTACCATCAGAATTCATCGACAGAAGTACCGCCGACAAACTCCGATGGCTTTCTCCAGTCCATACTGAACGATGAAGATCTGCAGCTGATGGACATGGCCATGAATGAGGGAATGTATACGATGCGTATGTTGGAAGGGACCAGCGGTCACCATCCGCAGCATCCGAACCACACCACTCATATGATGATGGCTGAACGCGATTCGGCGTCCGACAGTGCGGTGTCTTCAATGGGCTCGGAGAGAGTACCGTCGCTCTCCGACAGTGAGTGGTGTGATGGCAACGACTCGGCACAGGAGTACCACAGCTCTAAATTCCGTCCATACGAGAGCGCAGGTTACCCGCGAGAGCGTGCCGCCCCACTGCAGCCGCAGAAGAAGCATCATATGTTTGGAAAACGATGCTTTCAGGAACAAAATCAACCGACCCTCGATCCCCTCGTGCCGCCGCCGCCAAGAAACAGCGTCGTCAAGTACGAGTGTCCCGAACAAACATACCATCACGACAGCATGCACATGCACAACGAGTTTGCTCGTCAACAAACCGCCCCACCGCACGTTCCCCTGCAGCCTGCCCTCGATCTGAATGTACCTCATTCCACGCACACACTTCTGCAGGGCGGCGTGTCGAGTCCCATAAGTGGGCGTTACCCCTTCGGCACTCCGGAGCGAGTGCGTCACAACCACACGTACAGTGCACCCCCTGCGCCCCACGGACCGCACGTGCCCCCAACGCACCCCGACCACAGACCACCGGCGGCCAGAGACAAGCGAGTGAGGCGTTTGACCGATGGCAGTGTCTCCGATGGTGGATCTTCAGTCAGTGGACAGCATCTGAGTAGGGACGAGAAGAGGGCAAAAGCTTTAGGCATCCCACTCGAGGTGCACGACATAATAAACCTGCCGATGGACGAGTTCAACGAGCGTCTGTCGAAACACGACCTGAGCGAAGCGCAATTGTCGCTCATCAGGGACATCAGGCGACGCGGCAAGAACAAGGTCGCCGCGCAGAATTGTCGCAAGCGCAAACTCGATCAGATAACGTCACTAGCGGACGAGGTGCGGACGATGAGGGACAGGAAGGCGCGCACTCAGCGCGACCATCACGCGCTCAACGCCGAGCGGCAAAGGGTCAAGGAGAGGTTCGCTGCGCTCTACCGTCACGTGTTTCAGAACTTGCGCGACGCAGATGGGCGTCCTCTATCTTCGAACCAGTACTCTTTGCAGCAAGCAGCCGACGGGAATGTCGTCTTGATACCCAAAATGTCCCAACATTCAGATCATCAAATGAATCGCACGTCCGACGATGAAATCGATCGTAAGACTAAGTTTGACCAGTGA
- Protein Sequence
- MRSMSVEQRWQDLASLLTIPPPPDQYQHHYHHQHPHNISAHGAPGGYAPNYHAAIPPVPEKHPEVYGAAAPIEGAYKVESAHHPPQHDGMYYHQNSSTEVPPTNSDGFLQSILNDEDLQLMDMAMNEGMYTMRMLEGTSGHHPQHPNHTTHMMMAERDSASDSAVSSMGSERVPSLSDSEWCDGNDSAQEYHSSKFRPYESAGYPRERAAPLQPQKKHHMFGKRCFQEQNQPTLDPLVPPPPRNSVVKYECPEQTYHHDSMHMHNEFARQQTAPPHVPLQPALDLNVPHSTHTLLQGGVSSPISGRYPFGTPERVRHNHTYSAPPAPHGPHVPPTHPDHRPPAARDKRVRRLTDGSVSDGGSSVSGQHLSRDEKRAKALGIPLEVHDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTMRDRKARTQRDHHALNAERQRVKERFAALYRHVFQNLRDADGRPLSSNQYSLQQAADGNVVLIPKMSQHSDHQMNRTSDDEIDRKTKFDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -