Smyo002372.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synanthedon myopaeformis
Gene Symbol
nfxl1
Assembly
GCA_944738625.1
Location
CALYFO010000099.1:483842-486316[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 2.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.065 6.7e+02 0.7 0.4 4 10 169 175 168 175 0.96
3 17 3.1e-07 0.0032 17.6 15.9 3 19 186 202 185 202 0.95
4 17 2.3e-05 0.24 11.7 14.4 3 19 239 255 236 255 0.91
5 17 0.41 4.2e+03 -1.9 1.7 6 10 280 284 279 284 0.90
6 17 8.9e-10 9.2e-06 25.8 12.4 1 19 290 308 290 308 0.97
7 17 6.9e-07 0.0071 16.5 18.2 3 19 345 361 337 361 0.86
8 17 0.00053 5.4 7.3 17.8 1 18 395 412 395 413 0.97
9 17 3.5e-09 3.6e-05 23.9 17.1 1 19 422 440 422 440 0.99
10 17 0.0012 12 6.2 4.5 10 19 489 498 486 498 0.90
11 17 0.00057 5.9 7.2 7.7 1 12 508 518 508 518 0.96
12 17 0.6 6.2e+03 -2.4 4.1 14 18 547 551 547 552 0.85
13 17 0.21 2.1e+03 -1.0 0.4 8 12 568 572 567 579 0.79
14 17 9.1e-06 0.093 13.0 5.3 1 11 588 598 588 599 0.97
15 17 2 2.1e+04 -6.7 3.9 5 10 615 620 613 620 0.65
16 17 0.011 1.1e+02 3.1 12.7 3 18 629 645 628 646 0.88
17 17 4.9e-05 0.5 10.6 11.4 1 16 687 701 687 706 0.89

Sequence Information

Coding Sequence
ATGGCTCGAAGGTATCGTGATGCGGCGGCAAAATTGCAGCAAAACGTCCAGAAACATCTAAAAGAAATGAAAGAGTTATCATCCTCCGATGAAGAAGAACCGTTTGAGTCGAGCGTTTTAGACGGAATCCTTCAAAGTTATAAACATGGAGGCGGCGATGCTCAAATGTTGCTACGTACTAAGAATCTTATAGAAGAAACTTTAAGTGGCCGGCCGGTGACTTGCCTTATATGTATAGGATCTATTAAACGAGTTGATGCAATATGGACTTGCAATCATTGTTATTCATACTTCCATCTGTTGTGCATACAAAAATGGGCAAATGATAGCATTAGTTTGAGGAGTGAAGAGTCACAGGGCCCCATAACAGTATTCGTACGTAAAAAAATTGAATGGTGTTGTCCTAAATGCCGTCATTCTTACACTAAGGAAGAAATACCGCGTAAGTATCGTTGTTTTTGTAATAAAACTGACAATCCACCTTTCCACCCTTGGTTATTGCCACATTCTTGTGGGGAAGTCTGTGAGAAGAGATTATCGACTGGCGACAGTTGTAAGCACAAGTGCCTGCTCCTCTGCCATCCGGGCCCTTGCCCTCCTTGCCCGCAAACTGTCAATAGTAAATGTTTTTGTGAAAAACAATCTAAGAGAGTTAGGTGCAGTGCTGCCAAATGGTCTTGTGGACAGCAATGTATGAAAAAATTATCATGTCACACGCACAGCTGCGAAAGTCTCTGTCATGAGAATGAGTGTCCACCTTGCAGTTATACCAGTACTCAACCGTGTCTATGCGGTGCTGAGAAAGCGAAAAGACCTTGTAACGATCCTTATTGGCAGTGCCAAAGAGTTTGCAGTAAAGTGTACTCTTGCGGCTATCATAAATGTGAGGAAATATGCCACTCTGGAGAGTGTGGCACTTGTACGAACACTGGCATGAAATCTTGTCCCTGCGGTACCAATAAACGTTATATACAATGTCCTGATGTAATTGAAACATGCTTAGGTACATGTGGTAAGAAGCAGACAGATTGTGAACACAATTGTCCAGAAAAATGTCATAAAGGTCCCTGTCCTCCCTGTCAGGTACTCGTTGAAAAGCAGTGTCAATGTGCTACGCACACACGGTCATTGCCTTGCAGTAAAGAATATAAATGTGACACAAAGTGTCGTGGTATTAGGGCCTGCGGAAAGCACACGTGCGGACGTAGATGCTGCAATAAAAATTGTCCTCCCTGTGAAAAGATTTGCGATAAGCCACTTCAGTGTGGCCGTCATAAATGTACATCTGTCTGCCATCATGGCCCGTGTTATCCTTGCCCGAGAGAAACTCAAGTAACATGTCGCTGTAAAGCAACTTATATAACTGTGCCTTGCGGGAGGGAAAAGCATGTTAAACCACCAAAATGCTCTTTACTGTGTAAATTAAAATACAAATGTGGCCATAATGAGGAAAACAAACATTATTGCCACTTTGGTGAGTGTCCCCAATGTAAAGCGATTTGCTACAAAGTGTATGAGAACTGTGGACACGAGTGTAAAGCGGTGTGTCACGAGTATGTGGCTGTAGTATTTAAACAAATAGAAAAACCCGCTACTCCCTGGGAGGTACAACCCCCAAAGACAAAAGTCATGACTCTACAATGTCCACCTTGTGAAGTCCCCGTACCGATAACTTGTTTTGGAGAGCACGAGACTTCCGATCAGCCCTGCCACTCTGCTGCTCGCCGTCCTTGCGGTCGTGAGTGTGGAAAGCCTCTTACATGTGGCAATCACAAATGTACATTACTCTGTCATCTTGCAACTTCCGATCCAAACTATCCAAATGTGCCTTTTACTTGTGAAACATGTAATAAAGAATGCTTGTTGCCCCGTCCACCGAAATGTACTCATAAATGTGCTAAACTTGCATGTCACCCAAACTCTTGCCCTCCTTGCGAGGTTGTAGAAAGAGTTTCCTGTCACTGTGGTGTAACCAATCTATATTTACGTTGCCGAGAGCTGTCCACGGCTACAGAGGACATGTTGTCTTGTAAGCAACAGTGTCCGAAAAACTTGGACTGTGGACATAGATGCCGCAAGTCCTGTCACTCTGGTATTTGTAGGCAAGACCAAACATGCATTAAGAAGACGAAAGTGTCATGTTCATGTGGTAACTTGAAACGAGAAGCACCATGCAATCTTGTAAGGACAGGAGAAGCTGGCGTTTTGTGTGACAGGAATTGTGAAGAGAAAAGGATAACTGCCGAGATTGAGAAGGAAAAGGAGAAACAGAGGCTCCGGGAGTTGGAGATTGAGAGGAATCGTAAAGAATTAGCGGAATATGAATGGAAATTGAGTGGTAAAAAGAAGAAGTATAAGGAGAAGAAAGTATTGATAACCAAAGATGATAGAAATTGGCTGCAAAAATATTGGATTCCTCTTACGTCTGTAATAATCGGTATCTCAGCATTTATTTATGTTATATATTGCAATTGA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKELSSSDEEEPFESSVLDGILQSYKHGGGDAQMLLRTKNLIEETLSGRPVTCLICIGSIKRVDAIWTCNHCYSYFHLLCIQKWANDSISLRSEESQGPITVFVRKKIEWCCPKCRHSYTKEEIPRKYRCFCNKTDNPPFHPWLLPHSCGEVCEKRLSTGDSCKHKCLLLCHPGPCPPCPQTVNSKCFCEKQSKRVRCSAAKWSCGQQCMKKLSCHTHSCESLCHENECPPCSYTSTQPCLCGAEKAKRPCNDPYWQCQRVCSKVYSCGYHKCEEICHSGECGTCTNTGMKSCPCGTNKRYIQCPDVIETCLGTCGKKQTDCEHNCPEKCHKGPCPPCQVLVEKQCQCATHTRSLPCSKEYKCDTKCRGIRACGKHTCGRRCCNKNCPPCEKICDKPLQCGRHKCTSVCHHGPCYPCPRETQVTCRCKATYITVPCGREKHVKPPKCSLLCKLKYKCGHNEENKHYCHFGECPQCKAICYKVYENCGHECKAVCHEYVAVVFKQIEKPATPWEVQPPKTKVMTLQCPPCEVPVPITCFGEHETSDQPCHSAARRPCGRECGKPLTCGNHKCTLLCHLATSDPNYPNVPFTCETCNKECLLPRPPKCTHKCAKLACHPNSCPPCEVVERVSCHCGVTNLYLRCRELSTATEDMLSCKQQCPKNLDCGHRCRKSCHSGICRQDQTCIKKTKVSCSCGNLKREAPCNLVRTGEAGVLCDRNCEEKRITAEIEKEKEKQRLRELEIERNRKELAEYEWKLSGKKKKYKEKKVLITKDDRNWLQKYWIPLTSVIIGISAFIYVIYCN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01387307;
90% Identity
iTF_01386405;
80% Identity
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