Smyo012724.2
Basic Information
- Insect
- Synanthedon myopaeformis
- Gene Symbol
- GATA-B
- Assembly
- GCA_944738625.1
- Location
- CALYFO010000757.1:51631-68016[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-18 2e-14 53.1 3.3 1 34 323 355 323 357 0.97 2 2 3.5e-18 1e-14 54.0 6.3 1 34 394 426 394 428 0.97
Sequence Information
- Coding Sequence
- ATGTTGCACGAAGTGTGGCCCAACAATATTTGGTGCAAGACGGAAATGTACGAATTGGAGGCCTTCATCGCCGAGGTGAACAATAATTCGAGTAAAGAAGGCGAGGCGGAGTGCGGGGCGGAGGGGGGCGGCGGGGCGGAGAGCCCGCCTCCGCTGGCGGCGTTCGGCTACGCCCACGCGGGCGGGTTGTCTCCGTCGCACGCGCGCAGCTACCAGGAGCTGCGGCCGGCCTCCGCTCAGGCCCAGGCCCAGGCCGTAGCCGTGGGCAGTGTGGCGCGCGACATGCAGCCGTACGCGCACATCGAGGAGGCGCTCCACGGCTCCACGGACGGCGCGTACCTGCGCGGGCGCAGCCCCGACCTCAGCCCCTCGCCGCCGGCCGACGCGCGCCGCGACGACTATCGCCCTCTGCACTACGACGCCTACGCGCCGCCGCCGCCCTACTCGCACGACCACATCCACCACCTCGACGGGTCAGGCACCCTTGACGGTAACAGGAGTGGTTCCGTTTGCAGGGTTAGCAACGCTGCGGTGTACTCGCGCTGCGCTTACACCCCGGCGGCCTCCCCCTACTTCAACAGCGGGGCGGATCTGTCCCAGGCTCACATGTGGACCGCCAGCGCGGCCGGCTCACCCAACTACGGAGGCTCCACTGGCCCCACGACCGGTGTCGTCTTAGAGGAATACGGGGATGGCGGGGGCGGAGGGGCGGGAGCCACCGGTGCGGGGGGATCCCCGAACGGCGGCAGCGGGGGCTCGCTGCCCGCGTTCAGCGCACGATTCGGAGGCGCTTTCGCCACCGCCACCTCGAGGCCTTCCACTGTATACGGCGCACCGGCGCTCACAGCCAATGCGTACACGCATCAGGAAGTGTGGAGCTTGGACGGGAACCGTCGAGCCCCGCTCTCCGCGGCCGCTAGTCTTTCAGCCATCGAGATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCACCATCTACACGCCGCTGTGGCGACGGGACGCCACGGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATCAACCGGCCGCTGAAGCAGCCGCGGCGCGCCGGGCTGGTACGTCAGCGGCACGCGCCGCACGCGCTCGCAGCGCCACCGCACGACATGGGGCCCAAGCGACCCGGCATGGCCTGCAGCAATTGCCGCACCACGGCCACCTCGCTGTGGCGTCGCAACGCGCACGGCGAGACCGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACATCAACCGGCCCATGGCCATGAAGAAGGACTCCATCCAGACGAGGAAGCGGAAGCCCAAGAACGGCATCAAGAGCGAGCGAGGCGTCAGCAAGGCCACCGCGCACGCCACGCACTCCCTCAGCTGCGCGATCAAACTCGGCAAACAGAATCTCTTGGAAACGGCGAACGCGATCGGGTGCGCCGTGAACGGGAACCCCGGTGGCTCCGGCGCCGGACCACGGTCGCCCGTCGCCGTCGGCTACTACGTGCACCAGCCGCAGCTCAAACTGGAGGAGCCGCCGCCTGCGCACGCGCACGCACACGACCACTTGCATGCGCACGAACACGACCACATGCACACGCATGCGCACGCGATATACGACTCTGAGGAGTACCGGCGCGGGCCCGCCGTCGTGGGCGGCGTGTCCGGCGTGGCCGACCACCAGCAGGAGCGCCTCGACAGGCCCACAGTAGTCTCCATGGGCAGCTGA
- Protein Sequence
- MLHEVWPNNIWCKTEMYELEAFIAEVNNNSSKEGEAECGAEGGGGAESPPPLAAFGYAHAGGLSPSHARSYQELRPASAQAQAQAVAVGSVARDMQPYAHIEEALHGSTDGAYLRGRSPDLSPSPPADARRDDYRPLHYDAYAPPPPYSHDHIHHLDGSGTLDGNRSGSVCRVSNAAVYSRCAYTPAASPYFNSGADLSQAHMWTASAAGSPNYGGSTGPTTGVVLEEYGDGGGGGAGATGAGGSPNGGSGGSLPAFSARFGGAFATATSRPSTVYGAPALTANAYTHQEVWSLDGNRRAPLSAAASLSAIEMAEFFTEGRECVNCGTIYTPLWRRDATGHYLCNACGLYNKMNGINRPLKQPRRAGLVRQRHAPHALAAPPHDMGPKRPGMACSNCRTTATSLWRRNAHGETVCNACGLYYKLHNINRPMAMKKDSIQTRKRKPKNGIKSERGVSKATAHATHSLSCAIKLGKQNLLETANAIGCAVNGNPGGSGAGPRSPVAVGYYVHQPQLKLEEPPPAHAHAHDHLHAHEHDHMHTHAHAIYDSEEYRRGPAVVGGVSGVADHQQERLDRPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01389090; iTF_01386389; iTF_01387294;
- 90% Identity
- iTF_01386389;
- 80% Identity
- -