Smyo005905.1
Basic Information
- Insect
- Synanthedon myopaeformis
- Gene Symbol
- zfy1
- Assembly
- GCA_944738625.1
- Location
- CALYFO010000296.1:138233-146037[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 3.4 2e+02 2.9 0.3 2 23 5 26 4 26 0.95 2 14 0.0001 0.0061 17.2 0.3 1 23 1032 1055 1032 1055 0.96 3 14 8.2 4.8e+02 1.7 0.2 1 23 1136 1158 1136 1158 0.91 4 14 1.7e-05 0.001 19.6 0.5 2 23 1161 1182 1160 1182 0.96 5 14 0.039 2.3 9.0 1.4 1 23 1188 1210 1188 1210 0.97 6 14 0.0042 0.25 12.1 2.6 2 23 1217 1238 1216 1239 0.94 7 14 2.6 1.5e+02 3.3 1.7 5 23 1252 1270 1251 1270 0.95 8 14 0.00018 0.01 16.4 2.4 3 23 1277 1298 1276 1298 0.97 9 14 0.013 0.75 10.6 0.2 2 23 1314 1334 1313 1334 0.97 10 14 0.0014 0.079 13.6 0.6 1 20 1340 1359 1340 1362 0.89 11 14 0.00024 0.014 16.0 0.9 1 23 1370 1392 1370 1392 0.99 12 14 0.0011 0.066 13.9 7.8 1 23 1398 1420 1398 1420 0.98 13 14 2.3e-05 0.0013 19.2 2.4 1 23 1426 1450 1426 1450 0.97 14 14 0.00026 0.015 15.9 3.3 1 23 1456 1478 1456 1478 0.98
Sequence Information
- Coding Sequence
- ATGGACCAGGTTCAGTGTCCTGTGTGCACTCTATACCTTCACAATGGGATGTCACTCGAATCCCATCTTGACACTCATCCCAAGGATCAGGTCATAAAAGCTTTGTGTAATCTTGCAAATAATGCTCGTTTTGGAAGTAGAACTTCCACTCCGATGCATTCAGAAAGATCTTATAGAAGTAGAAGCAGATCTCAAACGCCGGCGGCAGATGAGAATTCTAGGTGGAATTGTCCCAGTGGTGATAATGATAGATATTGGCGAAGAACTCCAAGCAGAACCCCCAAACCAACACCATCATTGCAGAGTAATTCAAGGAGTTGTTCACTTGCAATTGATGCCAAACTTGATAACATCACATATGACACCAACACAGATTGTGCTGTCAATCAGCATACACCATCTACTTATTCTATCAAGGATAGTAAAAATCAACAAGCATACATGTCAGTGGCTGCATTTCCACCAGATTATGACCAGCAGTATGTGTTTTATCAGGATCAAACTGATGATAAAGAGGTAAAATATTCTCGCAGTGCCGATTATTCCTCATTGGACAATGGAAGTAGTGCATTTTCCTATAATTTGCCAACCTTAAGTCCAAATATAAAGTTGCCCCCACCGTCTATATTACAAAGAACCTCAAAAAGAGCTACAGACTTAACAAAAATTGTACCTAAAACAAATAATATACTAATGAAATCTAATTTAGCACCAATGCCATATATGTCTTCAAGTTTGAAGTCTATGCCAATTGTAATGACTGCACCGACTGCTTTTGTTCAAAAAAACACCCAAAATAACTTGGTTATGACAAGCAGTTTACCTACAAAAGTCATTGACGCTAAGATATCTGTCACACCTACAATGTCAAATAATCAGTACAACCAAATCACTACGGGAGCTTTTACTCCAGGCACAACAGTAGTCACGCAAAATTCTCAAATTATTTACCGTGAAATGGTTCAAAATGTCGATGGTAAACCATTTATTTCTACAATGCCTACTGTTTTGAGCGGCCACGAAAATGTCACCAATGTAGCACAGTCTAGTTCAGTATACCAAAATGTAATGGTTTTGGATCAGTTTGGGAATGCTTCATGTATGTATCCATCACAAATGTTACCAAAGGCTTGTAATACCACTATGTACAACGGCAATATTTCTAATGCAGACAAGTCTGTAACACATTCAGTACAGGATCCAAATAAAACTCTAATTATAGAGGTCGGACCACTTGCACCACCTCAATCCCTGAATGTTTGCGAAGCATCTACAAGCACACTTAATTCTCAACCAAGTGTGCAAAAAGCAGAGAGGTCTACTCACATAGATAAGAATGAGTCATTAGGACCTACAAAGGGTTTAAAGATTCTTAGCAATATTAAAGTAGAAGTGCCAGTGCAACATCATAAGAGTCTGTTAAATACTATTGTGGACCTTACTGGTAACAATGAGACTGAATATGCTGAGCAGTCAGCTTCACCGGGGAAGATTCTGCCTGATTTTGAAGAAAATGTCCACAACATGTTAGATGTTGTTTGTGATCAACCACAACCATCACCCACAAATGGTGATACTCTAGTTTCACAAGCCTTCTCTGTGATAAAAAATGTAGGCAATCCACCCTCCTACAAGGATACCTCCTTAAAGTCTAATACATTAGATAGTAAAATGGAAACACAGTTTTCAGATAGTTGTCCAGTGCCAGATTTAATATGTAACGAAAAACCATCAATATCACCTGTCAGTGAATTATCAGAGAATGGGGAAAATTCAACAGATCACACCTCATTATCTGTAAAACCTGAAAATAGCCAGACCTCTTGCTCAAAGTCTGAAGAAAATGACAATGATAAGAGATTACTCACACAGAAGCCACACAGAAATAATCCTTTAAGACTGAATAATATCTTTGTGAAAAAGCACAAGAAAATATTGCAGATTAAGAATTTCAAAACACCCCCATCAATAAGTGCTGTAATAAATCAGACTAAAGCAGAAACTAGAAAAATATCTTCCACTTGTAACATGTCTGACAATTTTTCTTTAAATAAAATACAATTTACAGAAAAAAATGAAGGTAGTAATAGCAAAGAAACTAAAAGCAGCAGTGTCAATACATATGAAAACTGTCGAGTTTCATATGAGAGTCAAGTAGTTGCAGCAGAAGTTATAGAAGCTAATGACCATAATGAAACCAATATTAGTTTAGGGGAACAGTCCATGGACATTGAAGTGCTGGATTCTGAGAGAATCATTAACGGGAATGGAGTGAAAGCGGATAGAGTTCATGTCAAGGAAGAAAACAATACAAGCAATGAAGGAGGTTATAGCAATCACACTGAAGTTTCAGACACAGATATAACTCCTCTGGAAACAATACGTCCTATCAATGTTATCTCTTATGGTAACATGACAACAGATGAGTTTGATGATGAGTCCAACCATAAGGAGCTTTTGGAACTTGAAGCTGCATCAAAGAATAAACACTTTGTAAACATGATGAATGAAAATTACTTTGGTGACAATATTTATGCAGATTACTTCACTCCAGATAGAGTTGAATCTTTTGAGTCAGAACGAGAGTCAGCTTCTTCACAAAGAGACGGACAGAGGGATAGCGTTTATAGTCTTTGGGGTGAGCCATCATCCAGGGAGAATGAATTTGTTTTACCAAATTTTATTCATGAAAGTTACAAGATTGCAGAAAATGGTATTGATTATTCTGAAATGGGGAGCGGGAATAGTCGGAGGGATGATGATCATGATGATTTCCGCGGCGATGAGGATCTACAAGGAGATGATGACGGAGATGGAGATGGTTGTGAGAAAGATAGCAAAGCAGATGTTTTAAGTGAAAGTCGCAGTGAAGGAGAAGCTTCTTTGAATATTTGTGCTGATGAATGTATGCCACCAAGGGGAGAGCTCAGCGGACAGGAGAGCAATGGAGATATGGAGTCATCATCATGGCCCGGGATATATTCGGATGTAGCTCCGGCAGAAACTTACGATTTGATGGCTCGTGAGAGTTGGGCATCGGATGGATCCGAAGTTGATGCCACAGAGAAAAGGGATAATGTGGAGGGACGCGTGTTCACTTGCTCCCATTGCGGGGCTCCGTTCCCGTCTCTGAAGGAGTTGCGTGCGCACCGCAATCTCGCGCACCCATCTCACGCGGGCCCCGTCTGTACAGTCACGTACAGTCGGCTCGTCACAGAGAGGACAATCAAGAAAGAGGAGAAAACGGATGATAATATATTAGCCGGTGTCACAGGCAACATGCTGACACTAACAGACACCAAGGAAATATCGACCACTATGCTTCAAATGTATGACGCCATTGGTGATGCGAAGCCTAAAATCGAAGGTTTCATAAAACAGGAGTCGAAGAGAAGGAAAAAGGATCATATATGTCCCACATGCAAAGTGGATCAGGTGACGGAGGCCGCGTTCAACGAACATCTCAAGATACATCCGCTCGAGTGCCTCACGTGCGGAAAATACTTTTCGAGGCGAGCGAATCTCTCTCTGCATATAAAGATGCACttgggaatcaagaatttcaaGTGTGATGTTTGCGAGAAGCGTTTCCTTACACGTCAGAAGCTGTCCGAGCACTCTAACATCCACACGGGTCGGTCTCCAATCAAGTGCACCATCTGCGATGACACCTTCCGGAGATACTCCAACATGGTGCAGCATCGGGACCGCCATCACTTTCAAAAGAAGTCGAAGGTGCGCTACTTCGTGTGCCAGTGCGGGGCACAGTTCCACTCGCGTGCCAAACTCCGTTGGCACAGCGAAACTCACGACGTGAAACCAAAGGCGTGCAACTATTGTAGCAGCAAATTTGTTCACGCCTCGTCCCTAACGAGACACATTCGTCGCACACACAACGAATATTATATCGGCGACACAAAGGGCAACAAGGAAAATGTTCCCTGTCCTGTATGCAAACAGGTGTATTTAAGGACGAATCTCCGATCCCACCTCCAAACGCACAGTGGCAAACGACCGTTCGTATGCATAATATGCAACAAAGCTTTCACTACAAAGTGGAATTTGAAATTGCACAGATGGACACACATGAGTCGCTCGGCAAAACCTTTCAAGTGCAACTTCTGCAGCGGAGCGTTCATAAGGCAATCCGAGTACATATCTCACATGAACTCGCACAAGTCGGTCCGTCCGTACACTTGCAACTATTGCGGATGTCAGTTTATAAGGAAGTACAACTGTCAAAGGCACATGAGGGAGCACGAGACGGCGAAGAAGTATATGTGCAAAGTGCCCAAATGTGGAAAGTCGTTTCATCGCAGCTATTACTTGTCGGAACACATGAAGGTACACAGCGGGGCAAGACCGTTCACATGTAATATATGTGGGAAAACTTCGAGTAACAAGTCGAATCACAATAAGCACGTGAAGATACACAACGCTAGGGAAGCGATCGCTTCTGAAGCGTAA
- Protein Sequence
- MDQVQCPVCTLYLHNGMSLESHLDTHPKDQVIKALCNLANNARFGSRTSTPMHSERSYRSRSRSQTPAADENSRWNCPSGDNDRYWRRTPSRTPKPTPSLQSNSRSCSLAIDAKLDNITYDTNTDCAVNQHTPSTYSIKDSKNQQAYMSVAAFPPDYDQQYVFYQDQTDDKEVKYSRSADYSSLDNGSSAFSYNLPTLSPNIKLPPPSILQRTSKRATDLTKIVPKTNNILMKSNLAPMPYMSSSLKSMPIVMTAPTAFVQKNTQNNLVMTSSLPTKVIDAKISVTPTMSNNQYNQITTGAFTPGTTVVTQNSQIIYREMVQNVDGKPFISTMPTVLSGHENVTNVAQSSSVYQNVMVLDQFGNASCMYPSQMLPKACNTTMYNGNISNADKSVTHSVQDPNKTLIIEVGPLAPPQSLNVCEASTSTLNSQPSVQKAERSTHIDKNESLGPTKGLKILSNIKVEVPVQHHKSLLNTIVDLTGNNETEYAEQSASPGKILPDFEENVHNMLDVVCDQPQPSPTNGDTLVSQAFSVIKNVGNPPSYKDTSLKSNTLDSKMETQFSDSCPVPDLICNEKPSISPVSELSENGENSTDHTSLSVKPENSQTSCSKSEENDNDKRLLTQKPHRNNPLRLNNIFVKKHKKILQIKNFKTPPSISAVINQTKAETRKISSTCNMSDNFSLNKIQFTEKNEGSNSKETKSSSVNTYENCRVSYESQVVAAEVIEANDHNETNISLGEQSMDIEVLDSERIINGNGVKADRVHVKEENNTSNEGGYSNHTEVSDTDITPLETIRPINVISYGNMTTDEFDDESNHKELLELEAASKNKHFVNMMNENYFGDNIYADYFTPDRVESFESERESASSQRDGQRDSVYSLWGEPSSRENEFVLPNFIHESYKIAENGIDYSEMGSGNSRRDDDHDDFRGDEDLQGDDDGDGDGCEKDSKADVLSESRSEGEASLNICADECMPPRGELSGQESNGDMESSSWPGIYSDVAPAETYDLMARESWASDGSEVDATEKRDNVEGRVFTCSHCGAPFPSLKELRAHRNLAHPSHAGPVCTVTYSRLVTERTIKKEEKTDDNILAGVTGNMLTLTDTKEISTTMLQMYDAIGDAKPKIEGFIKQESKRRKKDHICPTCKVDQVTEAAFNEHLKIHPLECLTCGKYFSRRANLSLHIKMHLGIKNFKCDVCEKRFLTRQKLSEHSNIHTGRSPIKCTICDDTFRRYSNMVQHRDRHHFQKKSKVRYFVCQCGAQFHSRAKLRWHSETHDVKPKACNYCSSKFVHASSLTRHIRRTHNEYYIGDTKGNKENVPCPVCKQVYLRTNLRSHLQTHSGKRPFVCIICNKAFTTKWNLKLHRWTHMSRSAKPFKCNFCSGAFIRQSEYISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHMREHETAKKYMCKVPKCGKSFHRSYYLSEHMKVHSGARPFTCNICGKTSSNKSNHNKHVKIHNAREAIASEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01388816; iTF_01387012;
- 90% Identity
- iTF_01387012;
- 80% Identity
- -