Basic Information

Insect: Synanthedon myopaeformis
Gene Symbol: -
Assembly: GCA_944738625.1
Location: CALYFO010001344.1:70922-74698[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.3 1.1e+04 -3.3 3.4 19 25 11 17 6 18 0.87

2 14 0.086 1e+02 3.2 2.9 13 40 163 187 157 193 0.73

3 14 0.32 3.9e+02 1.4 2.4 10 29 189 207 182 212 0.79

4 14 0.00021 0.26 11.5 2.7 5 38 212 242 209 246 0.82

5 14 0.0099 12 6.2 0.3 18 43 253 275 250 276 0.90

6 14 0.00015 0.18 12.1 3.3 5 41 269 302 267 304 0.93

7 14 4.8 5.8e+03 -2.4 0.2 17 29 309 321 306 331 0.69

8 14 0.037 45 4.4 3.3 13 29 333 349 321 368 0.77

9 14 0.72 8.7e+02 0.2 0.1 21 39 372 387 364 391 0.78

10 14 0.0017 2 8.7 0.5 18 43 397 419 395 420 0.88

11 14 0.0054 6.5 7.0 1.0 18 43 425 447 422 448 0.84

12 14 6.5e-06 0.0079 16.4 3.7 13 43 453 480 447 481 0.89

13 14 0.011 14 6.0 0.2 18 29 486 497 483 509 0.81

14 14 0.00034 0.41 10.9 0.3 18 43 517 539 511 540 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.3	1.1e+04	-3.3	3.4	19	25	11	17	6	18	0.87
2	14	0.086	1e+02	3.2	2.9	13	40	163	187	157	193	0.73
3	14	0.32	3.9e+02	1.4	2.4	10	29	189	207	182	212	0.79
4	14	0.00021	0.26	11.5	2.7	5	38	212	242	209	246	0.82
5	14	0.0099	12	6.2	0.3	18	43	253	275	250	276	0.90
6	14	0.00015	0.18	12.1	3.3	5	41	269	302	267	304	0.93
7	14	4.8	5.8e+03	-2.4	0.2	17	29	309	321	306	331	0.69
8	14	0.037	45	4.4	3.3	13	29	333	349	321	368	0.77
9	14	0.72	8.7e+02	0.2	0.1	21	39	372	387	364	391	0.78
10	14	0.0017	2	8.7	0.5	18	43	397	419	395	420	0.88
11	14	0.0054	6.5	7.0	1.0	18	43	425	447	422	448	0.84
12	14	6.5e-06	0.0079	16.4	3.7	13	43	453	480	447	481	0.89
13	14	0.011	14	6.0	0.2	18	29	486	497	483	509	0.81
14	14	0.00034	0.41	10.9	0.3	18	43	517	539	511	540	0.91

Sequence Information

Coding Sequence: ATGGCTGAAACATTGAACTCAAACCATTTTTGTAGATGTTGTCACAAGAATGGCTATTTCAAGTGTATATTTTCAGACTCCATTTACGAAAATGAGATCGAAAATTATTCGCAAATGTTGTACGATACATTCGGAATCTCATTTGAACCGTCAGAACATGATGAAATATATACAATATGCGATGAGTGTATTGAAAAACTACGTATCTCAACGGATTTCAAGATTGGTGTCCTTGCCCACGGAGAAAATATCAAACAAGAACCTTCAATGGCACAAGACATAAAAGTTAAAAAAGAAATGACCACAAACGATGAAGACTCGGATATAATAAAAAAAGTTTTAGACGAAAGTTCCAATCAAGGTGACAAAGTTGAAGAGAGTGGAAACGAATCAGACTTTTGTGAATCTAAAGTAAATGCAATAAGTAATAGAGAAGATTATAAGAGCAAAAAAAGTGAAATGCTAAGTAAAGAAATGTTGCACATAAATGAGAAAAAGTTTAAATGCTCAATATGCAATAGCCTTTTTACACTGAGCAGAAGTCTGAAGACTCACATGAAAACGCACACGGACAGAAAACCGTACGAGTGCCAAGAGTGCGGAAAGAAATTCAAAATCAAAGGCTACTTGTTGAAGCATCAAAAAAACATTCACACGGATGTAAAAAAGTACAATTGTCGATATTGCGAAAAAAGTATTGCGTCAAAACAGAATTTGATAGCGCACGAACGGACACATGTGGGTGTAAAACCGTACGTGTGTGATAAGTGTGATAAATCGTTTAGTAGCAAAGGTGGTTTAGTGAATCATATTAATAAAGTGCACGAGAAAAATAAGTTTTACAAGTGTAAAGTGTGCGATAAAGATTTTAAAACAAAAGAAAATTTCAAAAGACACATTTGGACTCATACGGGCATGAAATCTTTCAAATGCAGTGTGTGCAACATGAGTTTTGTACATAAAGATTATCTGAGTAAACACATGAATATACATAAAGGCGATAGAGCGTACAAGTGCGACATATGCAAGAAAACGTTTAAATACAAGAAGATTATACACCAGCACATGTTGTTTGTACATTTGGGCTTTAAACGAACGACCACTGTGAGCGACATATGCAAGAAAACATTTAAATCCAAACAGGGTTTAGACGATCACATGTCGCCTGTACATTTGGGCTTGAGGCCTCAGTGCGACATTTGCAAGAAGACATTTAAAAACAAACAGAGTTTAAGCAGGCACATGTCGGCTGTACATTTGGGCTTGAAGCCTCAGTGCGACATTTGCAAGAAGACATTTAAAAACAAACAGAGTTTACGCAGCCACATGTCGGTTGTACATTTGGGCTTGAAGCAAACACGCACTGCCACTGAGTGCAACATTTGCAAAAAGACATTTAAATACAAACAGAATTTAAGCAGGCACATGTCGGCTGTACATTTGGGCTTGAAGCCTCAGTGCGACATTTGCATGAAGACATTTAAATACAAGGACTATATACGAAAGCACATGTTGGAGGTACATTTGGGCTTTAAACCAATGCCCACCAAGTGCGACATTTGCAAAAAGACGTTTAAAAACAAACAGACTTTAAGCAGGCACATGTCAATTGCACATTTGGGCTTTTAG
Protein Sequence: MAETLNSNHFCRCCHKNGYFKCIFSDSIYENEIENYSQMLYDTFGISFEPSEHDEIYTICDECIEKLRISTDFKIGVLAHGENIKQEPSMAQDIKVKKEMTTNDEDSDIIKKVLDESSNQGDKVEESGNESDFCESKVNAISNREDYKSKKSEMLSKEMLHINEKKFKCSICNSLFTLSRSLKTHMKTHTDRKPYECQECGKKFKIKGYLLKHQKNIHTDVKKYNCRYCEKSIASKQNLIAHERTHVGVKPYVCDKCDKSFSSKGGLVNHINKVHEKNKFYKCKVCDKDFKTKENFKRHIWTHTGMKSFKCSVCNMSFVHKDYLSKHMNIHKGDRAYKCDICKKTFKYKKIIHQHMLFVHLGFKRTTTVSDICKKTFKSKQGLDDHMSPVHLGLRPQCDICKKTFKNKQSLSRHMSAVHLGLKPQCDICKKTFKNKQSLRSHMSVVHLGLKQTRTATECNICKKTFKYKQNLSRHMSAVHLGLKPQCDICMKTFKYKDYIRKHMLEVHLGFKPMPTKCDICKKTFKNKQTLSRHMSIAHLGF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01387802;
90% Identity: iTF_01387802;
80% Identity: iTF_01387802;