Smyo015989.1
Basic Information
- Insect
- Synanthedon myopaeformis
- Gene Symbol
- SNAPC4
- Assembly
- GCA_944738625.1
- Location
- CALYFO010001119.1:127752-129935[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.56 5.8e+02 0.9 0.0 4 18 166 180 164 181 0.90 2 6 1.7 1.8e+03 -0.7 0.0 22 37 243 258 239 258 0.88 3 6 1.4e-09 1.5e-06 28.4 0.6 1 45 273 319 273 320 0.95 4 6 2.9e-07 0.00029 21.1 0.2 2 45 327 374 326 375 0.94 5 6 3.6e-08 3.7e-05 23.9 0.0 1 41 379 419 379 423 0.95 6 6 3.5e-08 3.6e-05 24.0 0.0 3 45 430 474 428 475 0.90
Sequence Information
- Coding Sequence
- ATGGAATTTAATGAAAATTCATTTTATTCGTCCGAAGTCGACATGAACTCGGATATCGACGAGGAGAAAATGAGTATAATAAGAATATTACACGATCTGAAAGTCGCCAGAGTGGTACATAGTAGGTCGTCTATGAGTTCAGATTACCCAGTTACTAGTTCATACATCGAGACCGGGTGCCCTTCGCCGGAACCGTCTGAACAAGAGAAAGTTTCCAAGGCTCTACAACTGAACTTATCTCTAGACGAAAAATTGAAGGAACTTAGTGAAATATTGAGCGAACGACTTGTTTTTTGTCAACAGAAGTTAACAGAGATTGAGGCGATCAAAAGAAAATTCAAGAAGGAAACTAAGGAAACGCCAAACAAATATGTTAAGAGTTCTAGATCTTACTTTAAAGATAAAAAGAGCTTTCCACCTCCAGACAATGAGGATACGGTTTTCATGATAAATAATGAGATGTATGATTTCCGTGAAGTAGCATCTGTGCCTGGTTGGACGGTCACAGATCAGAGAAAATTTATAAAAATGATACGCCTCATGTCTATAGAAGTCACGAAGAGTAAGTTAAAATCTAAAATTGCAGCATTAAAACGCACCTATAATGATGCTACGGAGACAGAAAAGACAAATATTAGGGAGAAAATAGCTGCACTCAAGGAAGAGATTGATGAAGTGCCTAATAAAGAACTTAAAGATATAGCACTCCCAATAAATGAAGACTATGATTGGGATAGGGTTCATAAATTCTTAGGTAGACATACTCCTGAGGAATATGAGTTTCTTTGGAAGATCTGTTTGCATCCATCTATAAATAAGAGCAGGTGGAACAGCGAGGAGCACACTTCGTTGCAGAAAATAGCGGCAATGAATAACCATGAGAATTGGGAGAAAATTGCGAGAGAATTGAACACAGGAAGAACTGAATATCAATGCTTTGTATACTACAGAACCAATGTGTGCAATTTAGGTCTTGGTCAAAAATGGACAATAGAAGAAGAGCAGTACCTTATGAGATTAATCGGGTATTACAAGGAGGGTCAGAATATTAACTGGGGCAAAGTAGCTTCCTGTATAGATAATAGGACAAAAATGCAAATTTACAACAAGTACTTTAGACTATTGGAAACTAGAAAGGGAAGGTTTGCTCAGGAGGAAGATGCGGTTATACTCAAAGGTGTGGCAGAATTTGGTGCAAACTATAGGAGCATGCAGAAATTTCTACCGGGTCGCTCTGTATCGCAATTGCGTGTTCGACATAGGTTATTGCAAAGGAATGAAAAAATACCATGGACTACGAAAGAAGATAAAATTCTCATGAAACTAATGTTGGATAAGAATTTTGAGGGAGGCTTCTCCAAAGTTGCTGAGTATTTGCCTGGAAGAGACAGAATCAATATCAGATCGAGATTTAACACTTTAATAAAGTGGATGAAAGCCAACCCTAATTTGGATTTGTCTGAAGCCCCCCGACGAATAAGAAAAGAAAGACAGATCATAGAGGAAGAAGACTTTGTTACAGTTATTAGGAAATTACAACAAAGATTGAAGAGTGAAAATGATTTTGGAGATCTTTCCGCTGACATAATTGAAAATATCGATGACACCATAACTAAAGTAATTTTATCCAAAGATGATAGGACATTTAAAGGCTTAGAAGATAAATTGGAAGAGGCACTTGCGAAAGGTTGTCATACTGTTGACACAACAAATTTGAAGAAACTGTTTTTCCTTTTTAAGGTCATTTTTGATAGAGAACAATTTAAAAACAGTATTTACAATGAGAAATATCCGAGTTTGTTAGAGAAGGAACGTGTACTAACTGTGAAATCTTATTCGAGAAAGACCAAGAATCATACCATGAGTACAGATTGCGGGTTGGACATATGGGGCAATTCAAAATTGGGCAATTCAGACTATGTCCTTCCTCCAAACTTATCTACGATATGTGGTCTTATAAGGTTATTTAAATATTGCAATGAAAATAACGACGATAAATGTACAGTTAATTTTTCAGTTTTGATTAGCAAAAACCCAATGCTTAGACAAAAATTTTATCTTCTGCAAGAGAGATTTACTTTTCTGTTCCTGTGGCCTCTTCTTTTAGGTAAGAAGCCACCGAAAAACTTAACACCTGGTGGGGCAAGTAATAATAATAATAATAATAATAATCAATCTAGATAA
- Protein Sequence
- MEFNENSFYSSEVDMNSDIDEEKMSIIRILHDLKVARVVHSRSSMSSDYPVTSSYIETGCPSPEPSEQEKVSKALQLNLSLDEKLKELSEILSERLVFCQQKLTEIEAIKRKFKKETKETPNKYVKSSRSYFKDKKSFPPPDNEDTVFMINNEMYDFREVASVPGWTVTDQRKFIKMIRLMSIEVTKSKLKSKIAALKRTYNDATETEKTNIREKIAALKEEIDEVPNKELKDIALPINEDYDWDRVHKFLGRHTPEEYEFLWKICLHPSINKSRWNSEEHTSLQKIAAMNNHENWEKIARELNTGRTEYQCFVYYRTNVCNLGLGQKWTIEEEQYLMRLIGYYKEGQNINWGKVASCIDNRTKMQIYNKYFRLLETRKGRFAQEEDAVILKGVAEFGANYRSMQKFLPGRSVSQLRVRHRLLQRNEKIPWTTKEDKILMKLMLDKNFEGGFSKVAEYLPGRDRINIRSRFNTLIKWMKANPNLDLSEAPRRIRKERQIIEEEDFVTVIRKLQQRLKSENDFGDLSADIIENIDDTITKVILSKDDRTFKGLEDKLEEALAKGCHTVDTTNLKKLFFLFKVIFDREQFKNSIYNEKYPSLLEKERVLTVKSYSRKTKNHTMSTDCGLDIWGNSKLGNSDYVLPPNLSTICGLIRLFKYCNENNDDKCTVNFSVLISKNPMLRQKFYLLQERFTFLFLWPLLLGKKPPKNLTPGGASNNNNNNNNQSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01385699;
- 90% Identity
- -
- 80% Identity
- -