Smyo015439.1
Basic Information
- Insect
- Synanthedon myopaeformis
- Gene Symbol
- kn
- Assembly
- GCA_944738625.1
- Location
- CALYFO010001045.1:132572-142260[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-123 2.1e-119 399.6 0.0 205 387 1 200 1 208 0.99 2 2 1.2e-05 0.12 10.8 5.5 420 561 209 365 201 386 0.68
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAAGTGGTGATATCAACCCAAGTGATGGTGGACGGACCCCTTCTAGCCATATCGGATAACATGTTCGTTCACAATAACAGCAAACATGGCCGGCGCGCGAAACGGCTCGACCCCACTGAAGGTATTGATGGCGCCTCCGAACCACCTTCAGGTTTATATCCACCGTTGCCAGTAGCAACGCCGTGCATCAAAGCGATATCACCAAGCGAAGGCTGGACATCTGGAGGTTCAACGGTTATCATAGTCGGGGATAACTTTTTTGACGGACTACAAGTTGTGTTTGGAACTATGCTAGTATGGAGTGAGTTAATAACATCCCATGCAATAAGAGTGCAGACTCCACCGCGACACATACCAGGAGTTGTTGAAGTGACACTATCCTATAAAAGCAAACAGTTCTGTAAAGGAGCACCTGGCAGATTTGTTTATGTTTCTCTCAACGAGCCCACGATAGATTACGGCTTCCAGAGACTACAGAAACTTATACCTAGACATCCCGGTGACCCGGAGAAATTACCCAAAGAAATAATCTTAAAGCGAGCAGCAGACTTGGCGGAAGCTTTGTATTCGATGCCTCGTAACAACCAACTGGGTCTAGGAGCGCCGAGATCGCCTCCCGCCAGTATGCCCTTCAACACTTACACTGGCCAATTGGCTGTCAGCGTTCAGGATACCGCTGCATCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGCTAGCGCAGGCGGCGTTGCGGGGGGAGGCGGCGGGGCGGGGTCCCCGCGCTATTGCTCCGCGGCCTCCACACCACATGCCACTCCTTACCATCACCAACACTATCCACCCACCACGCTCTTCAACACCAGCTCACTGTCTCTGGGCCCGTACCACCCGGCTAACCTGAATGGACCTTTATCATCCGACTATAACGCGTATAATACGAAAGATAGCGGACATTACATTCAAAGAAATGGGGATTCTAAAAACCCGGCCGACTGTCCGGCAAACAGTCATACAAAATGCAACGAAGCCATGAAAGGGCACGCTAGAGAGAGAAATCTAAGGAGCGCATTCGCAGTAGTGAGGCACAGTCCGCAACATCAACAAAACTGCCATCACCTCGCTGTACAATGTAATTTCAATAACGTCTTATTGTCAACAGGAATGGGAGGTCTTGTGTCATCTCCGTTCAGCATGAACCCATTCTCTCTGCCGACTTGTAACGCTCAACAGTACGCGCAAACAGCACCTCTAGCCTCGAAGTAA
- Protein Sequence
- MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDGASEPPSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNTYTGQLAVSVQDTAASQWTEEEYARSASAGGVAGGGGGAGSPRYCSAASTPHATPYHHQHYPPTTLFNTSSLSLGPYHPANLNGPLSSDYNAYNTKDSGHYIQRNGDSKNPADCPANSHTKCNEAMKGHARERNLRSAFAVVRHSPQHQQNCHHLAVQCNFNNVLLSTGMGGLVSSPFSMNPFSLPTCNAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01388255;
- 90% Identity
- iTF_01388255;
- 80% Identity
- -