Basic Information

Insect: Synanthedon formicaeformis
Gene Symbol: -
Assembly: GCA_945859765.1
Location: CAMAON010000072.1:846493-865597[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.071 4 8.3 4.4 3 23 169 190 167 190 0.97

2 23 1.2 68 4.5 0.8 2 23 217 238 216 238 0.95

3 23 0.38 21 6.0 0.3 2 23 261 282 260 282 0.96

4 23 1 60 4.6 0.1 1 23 286 309 286 309 0.93

5 23 0.081 4.6 8.1 3.8 1 20 314 333 314 337 0.84

6 23 0.69 39 5.2 0.1 3 23 346 367 344 367 0.94

7 23 0.048 2.8 8.8 6.2 1 23 532 555 532 555 0.96

8 23 0.038 2.1 9.2 1.2 2 23 582 603 581 603 0.96

9 23 1.6 89 4.1 0.6 2 23 626 647 625 647 0.95

10 23 0.036 2.1 9.2 4.2 1 19 678 696 678 701 0.77

11 23 0.002 0.11 13.2 0.8 1 23 708 731 708 731 0.97

12 23 0.027 1.5 9.7 0.8 2 23 791 813 791 813 0.93

13 23 2.3 1.3e+02 3.5 0.0 2 23 841 862 840 862 0.94

14 23 9.5 5.4e+02 1.6 1.7 1 23 884 907 884 907 0.74

15 23 0.0011 0.062 14.0 2.3 1 23 911 933 911 933 0.98

16 23 0.0012 0.065 13.9 0.3 1 23 1339 1361 1339 1361 0.98

17 23 0.22 12 6.8 2.8 1 23 1365 1387 1365 1387 0.98

18 23 0.0079 0.45 11.3 1.8 1 23 1392 1415 1392 1415 0.92

19 23 0.35 20 6.1 0.1 2 23 1423 1445 1422 1445 0.94

20 23 0.0044 0.25 12.1 3.2 1 23 1452 1475 1452 1475 0.97

21 23 0.088 5 8.0 2.1 1 23 1481 1503 1481 1503 0.97

22 23 2.1e-05 0.0012 19.4 0.8 1 23 1509 1531 1509 1531 0.99

23 23 0.0006 0.034 14.8 6.5 1 23 1537 1560 1537 1560 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.071	4	8.3	4.4	3	23	169	190	167	190	0.97
2	23	1.2	68	4.5	0.8	2	23	217	238	216	238	0.95
3	23	0.38	21	6.0	0.3	2	23	261	282	260	282	0.96
4	23	1	60	4.6	0.1	1	23	286	309	286	309	0.93
5	23	0.081	4.6	8.1	3.8	1	20	314	333	314	337	0.84
6	23	0.69	39	5.2	0.1	3	23	346	367	344	367	0.94
7	23	0.048	2.8	8.8	6.2	1	23	532	555	532	555	0.96
8	23	0.038	2.1	9.2	1.2	2	23	582	603	581	603	0.96
9	23	1.6	89	4.1	0.6	2	23	626	647	625	647	0.95
10	23	0.036	2.1	9.2	4.2	1	19	678	696	678	701	0.77
11	23	0.002	0.11	13.2	0.8	1	23	708	731	708	731	0.97
12	23	0.027	1.5	9.7	0.8	2	23	791	813	791	813	0.93
13	23	2.3	1.3e+02	3.5	0.0	2	23	841	862	840	862	0.94
14	23	9.5	5.4e+02	1.6	1.7	1	23	884	907	884	907	0.74
15	23	0.0011	0.062	14.0	2.3	1	23	911	933	911	933	0.98
16	23	0.0012	0.065	13.9	0.3	1	23	1339	1361	1339	1361	0.98
17	23	0.22	12	6.8	2.8	1	23	1365	1387	1365	1387	0.98
18	23	0.0079	0.45	11.3	1.8	1	23	1392	1415	1392	1415	0.92
19	23	0.35	20	6.1	0.1	2	23	1423	1445	1422	1445	0.94
20	23	0.0044	0.25	12.1	3.2	1	23	1452	1475	1452	1475	0.97
21	23	0.088	5	8.0	2.1	1	23	1481	1503	1481	1503	0.97
22	23	2.1e-05	0.0012	19.4	0.8	1	23	1509	1531	1509	1531	0.99
23	23	0.0006	0.034	14.8	6.5	1	23	1537	1560	1537	1560	0.98

Sequence Information

Coding Sequence: ATGAAAAATACAGTAATAACAAATCGATTACAAATCAAAATTGACGTTGCCAAAAATATTAATGCGAAGCTTTTGTTTGTAGGTGGCAACATCGGGACCTCTAGCATTACTTGCGAGGCTACCGCAAGTAATCTTATAAAAATTGAAGAACCCGAAGTATATGATAATGAAAGTAGCATTACTTGCGAGACTACCGCAAGTAATCTTATAAAAATTGAAGAACCCGAAGTAGATGATAATGAAAGTAGTATTACTTGCGAGACTACCGCAAGTAATCCTATAAAAATTGAAGAACGCCAAGTAGATGGTAATGAAAGTAACGTATCAGTCGATCCGCTCGAGGTTACTGCTGAATTTACAACTGACACAACACAACCCACTCGTGTTTATGTTAAGATAAACAAGAAGGCTATGATGCATAAACATCTTGAAAACATAAGAACACTAATTTTGAATTCTAACGCCACTCCTGTAAAATATAAAACAATGTTGCAGAACTATTGGTGTCATTTTTGTGAATTGTCATACAATGATACGCACGATTTGAAAAAGCATGTCCAAAAGAAGCACATCGATGAAGAAATAAAGTCGTCCATGGAAAACAATAAAATAGATGAATACTCATGGTTGATAGATATAACCAATTTGAAATGTAATCTGTGCGATTCTAAAATTAGGACAATAAGGAAATTGATGAATCATTTAAGTCTTCATGGAATAGAAATACATGAGGATATCTCCAACCGCGTACTCTCATTCAGGGCCGAGGACAAAAAACTGATTTGTCCAAATTGCCTTTCCTGTTTCGAGGATATCAACGTTCTTGTAAATCACATCAAAACACATTACAAAAATTACCAATGCATCGTTTGCGGTGCGATGTTTGAAAGCGAACCACTTTTTTATAAACATGTATATATCGTCCACAAAATTGGTAAATTTCCGTGCACCTATTGCAATAAAGTGTTTAATACACAAACTAAATGTGAAAACCACGAATATTACGTACACTGTAGCTACAAGAGAAAATATGGATGCCCATATTGTTCAGAAAAATTTTGGGCACAAAGCGCAATGACTGATCACATGATAAATAAACATGAGAATATGATAAAAAGTGGCAACATCGGGACCTCTAGCATAACTTGCGAGGCTACCGCAAGTAATCTTATAAAAATTGAAGAACCCGAAGTAGGTGATAATGAAAGTAGCATTACTTGCGAGACTACCGCCAGTAATCTTATAAAAATTGAAGAACCCGATGTAGATGATAGTGAAAGTAGCATTACTGAAAGTAATCCTATAAAAATTGAAGAACCCGAAGTAGATGATAATGAAAGTAGCATTACTTGCGAGGCTACTGCAAGTAATCCTATGAAAATTAAAGAACGCCAAGTAGATGGTAATGAAAGTAACGTACCAGTCGAACCGTTTGAGGTTACTGCTGAATTTGCATCTGGCTCTACAAAAGCCACTCGTGTTTACATTAAGATAAACAGGAAGGCGATAATGAATAAGCATCTTGAAAATATAAGAACACTACTTTTGAATTCTAACGCCACTCCTGTAAAACATAAAAACATGTTGCAAAACTATTTTTGTCATTTCTGTGAATTGTCATACAATGATACGCATGATTTGAAAAAGCATGTCCAAAAGAAGCACAACGATGAAGAAATAAAATCGTTCGTTGAAAACAGTGATACAAAAGAAAACTCTTGCTTATTAGACATAACTAATTTAAAATGTAACTTCTGCGATGCCAAAATCAAGACATTACATGAATTGATGAATCATCTAAGTGTTCATGGAATAGAAATGCATAAAGATATCGCCTACCGCATACTCTCATTCAGCGCCGATAACGAGACACTGGTTTGTTCGAATTGCCTTTTCTGTTTCGAGGATTTCAACGTTCTTGTGGATCACATAAAGGCACATTACAAGAATTTTCAATGCATCATTTGTCTAGCGACGTTTGAAAACGAACCGCTTTTTTATAATCATGCGTATATACACAAAATTGGTAAATTTCCGTGCACCCATTGCAATAAAGTGTTTAGTTCACAACTTCAACGTCACAACCACGAGTATTATATGCACTGTGGTTACATGAAAAAGTATATATGCCTACATTGTCCAGAAAGATTTTTGACTCAAGCCCTATTGACGGATCACATGATGACTAAACATGGGATGATAACTCAAAGTAACAACACGACTGTTAAAAAACTAGAAGTAATTACTTCAAATCCTAAAACTCTTGAAGCGACTGAAGATGTCATGATCATGAGAAAACATCTTCAGAACGCTAGAGCAATTCTTTTAAACACGAACGCAACTCCTTTCAAAGGTGAAACAGCACCGAACACCTGCTATTATTGTTTAGCTTCGTTTGAAAATATGAGTGATTTGAAGAAACACACACTAGAAAAACACGATGACAATGAAAAGAAGACTTTTATGGGATGTTCCGCGTTCTTTTTTAGTTATTCATGCAAATTGGATATAACAAATCTGAAATGTAATCTTTGCAAAGCTTCCGTTGAAACGTTGGAAGGTATGATGGATCATTTGATCGAACACGACGTGGTGATCCATAAGGACATAGACAACCACATACTTGCGTTTAAAGTTGAAAACAACGAATTCCGTTGCGGTAAATGTAATAAGTATAGATCTCATTCCCTGAAAAATGTAGTGGCTCACATCAAGGTGCATTATAAGAATTACAAATGTGATACGTGTAGCGCCGCGTTTATTAATAAAAGTGGTTTGCACCAACATCTACATGTCCACAGTGACCACATCGAAATCGCTAGAAATATTCGCGAACTGACCGTAAGTAGAAGGATTAAAAGGACAATTCCTGAAAGTGTCATCGATAAACATAATGTGCCCACTGATTGGACTGTCACTATTAAAACGAACACAGCCAAGCCTGTTACAGTCTTGCCAAGCCAAGCTAATCTTGTTACTATAAAATCTAATTCAACCAGGCCTGGTGACCACATCGAAATCGCTAGAAAAATTCGCGAACTGACCGTAAGTAGAAGGATTAAAAGGACAATTCCTGAAGTAGTCATCAATAAACATAGTGTGCCCGCTGATTGGACTGTCACTATTAAAACGAATAAAGCCAAGCCTGTTACAGCCTTGTCAAGCCAAGCCAATCTTGTTACTATAAAATCGAATTCAGCCAGGCCTGGTGACCACATCGAAATCGCTAGAAATATTCGCGAACTGACCGTAAGTAGAAAGATTAAAAGAACAATTCCTGAAGTTATCATCGATAAACATAATGTGCCCACTGATTGGACTGTCACTATTAAAACGAACACAGCCAAGCCTGTTACAGTCTTGCCAAGCCAAGCTAATCTTGTTACTATAAAATCGAATTCAACCAGGCCTGGTACTTTTAAATCGACCAAAGCCAATCCTGTTACTATAAAATCGAGTACAGCTAATCCTGTTATTATAAAATCGAATACAGCCAAGCCTTGTACTTTTAAATCGATTAAGGCCAAGCCTATTACTATTAATTTCGATACAGCTATTCCTATATCTAACACAACAGGTCCTATAAAGAAAGCAGAGAAAAGGAATCCAAGTGTGATTATAAAATATAGTGAAACCATACTAAACAAGGAGCTGATGAATAAACATTTGCAGAACGTGAGAGCCATACTTTTAAACACAAACGCCACTCCTGTAAAACAACAATTATCATTAAATTACTACTGCAGTTTCTGTATATTTTCATGTCCAAATATACACAAACTAAAAGAGCATACACTAAGCGACCACGTCGATTTTCAAATACGGAACTTCATGAATGGAGTGTCATTGCCTGATTATTCCTGcagactggatataaccgattgcaaatgtaaactgtgcgaacattccgctctaacgttggaagagattatggatcatctgattgaacacggagtggtaatacacaaggacataaacaaccatatactcccgttcagagtggagaacgataaattcatttgcccaaattgcttagaaagatataacactttgaaaaatgtcacagaccacatgagggtgcattacaagaattacgtgtgtgagacgtgcaacgccatttttatatgtaagcgaagtctgcaaaaccatctgcatatccatagatttggtgaattcacatgcagttattgcagcaaagtgttcgatacgcgaagaaagtggtcagtgcacgagaaatttgtgcataccgatgctaaaaagagaattaaatgtgcactatgcccggaaagatttaccgcccaggcttcaaagattgagcacatggttaaggtgcacggtttgcaacgtaagacgttctcttgcaccgcgtgcgagagagagttcaacagtaggccaaagctaagccatcacatgaggaagtatcacttaatggagaaaagacacgagtgcaacttctgcgaatcgagattcttcgccaaaagtgaattggttaaccacctgctgaagcacaccggcgagaagcgttttcagtgtgacctttgcttgaaatcgtacgggaggaagtccacattgagagagcatataaggatacacgctgatgataggcgattcaaatgtaaccactgtggcatgacattcgtacagaagtgcagcatgaagagtcacctgctgacgaaacacggggaaCTTATTACTTAA
Protein Sequence: MKNTVITNRLQIKIDVAKNINAKLLFVGGNIGTSSITCEATASNLIKIEEPEVYDNESSITCETTASNLIKIEEPEVDDNESSITCETTASNPIKIEERQVDGNESNVSVDPLEVTAEFTTDTTQPTRVYVKINKKAMMHKHLENIRTLILNSNATPVKYKTMLQNYWCHFCELSYNDTHDLKKHVQKKHIDEEIKSSMENNKIDEYSWLIDITNLKCNLCDSKIRTIRKLMNHLSLHGIEIHEDISNRVLSFRAEDKKLICPNCLSCFEDINVLVNHIKTHYKNYQCIVCGAMFESEPLFYKHVYIVHKIGKFPCTYCNKVFNTQTKCENHEYYVHCSYKRKYGCPYCSEKFWAQSAMTDHMINKHENMIKSGNIGTSSITCEATASNLIKIEEPEVGDNESSITCETTASNLIKIEEPDVDDSESSITESNPIKIEEPEVDDNESSITCEATASNPMKIKERQVDGNESNVPVEPFEVTAEFASGSTKATRVYIKINRKAIMNKHLENIRTLLLNSNATPVKHKNMLQNYFCHFCELSYNDTHDLKKHVQKKHNDEEIKSFVENSDTKENSCLLDITNLKCNFCDAKIKTLHELMNHLSVHGIEMHKDIAYRILSFSADNETLVCSNCLFCFEDFNVLVDHIKAHYKNFQCIICLATFENEPLFYNHAYIHKIGKFPCTHCNKVFSSQLQRHNHEYYMHCGYMKKYICLHCPERFLTQALLTDHMMTKHGMITQSNNTTVKKLEVITSNPKTLEATEDVMIMRKHLQNARAILLNTNATPFKGETAPNTCYYCLASFENMSDLKKHTLEKHDDNEKKTFMGCSAFFFSYSCKLDITNLKCNLCKASVETLEGMMDHLIEHDVVIHKDIDNHILAFKVENNEFRCGKCNKYRSHSLKNVVAHIKVHYKNYKCDTCSAAFINKSGLHQHLHVHSDHIEIARNIRELTVSRRIKRTIPESVIDKHNVPTDWTVTIKTNTAKPVTVLPSQANLVTIKSNSTRPGDHIEIARKIRELTVSRRIKRTIPEVVINKHSVPADWTVTIKTNKAKPVTALSSQANLVTIKSNSARPGDHIEIARNIRELTVSRKIKRTIPEVIIDKHNVPTDWTVTIKTNTAKPVTVLPSQANLVTIKSNSTRPGTFKSTKANPVTIKSSTANPVIIKSNTAKPCTFKSIKAKPITINFDTAIPISNTTGPIKKAEKRNPSVIIKYSETILNKELMNKHLQNVRAILLNTNATPVKQQLSLNYYCSFCIFSCPNIHKLKEHTLSDHVDFQIRNFMNGVSLPDYSCRLDITDCKCKLCEHSALTLEEIMDHLIEHGVVIHKDINNHILPFRVENDKFICPNCLERYNTLKNVTDHMRVHYKNYVCETCNAIFICKRSLQNHLHIHRFGEFTCSYCSKVFDTRRKWSVHEKFVHTDAKKRIKCALCPERFTAQASKIEHMVKVHGLQRKTFSCTACEREFNSRPKLSHHMRKYHLMEKRHECNFCESRFFAKSELVNHLLKHTGEKRFQCDLCLKSYGRKSTLREHIRIHADDRRFKCNHCGMTFVQKCSMKSHLLTKHGELIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -