Basic Information

Insect: Synanthedon formicaeformis
Gene Symbol: Znf711
Assembly: GCA_945859765.1
Location: CAMAON010000060.1:1754470-1765273[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00024 0.014 16.1 0.5 1 23 238 260 238 260 0.99

2 11 0.025 1.4 9.7 1.8 2 23 268 289 267 289 0.96

3 11 0.17 9.6 7.1 1.3 1 22 293 314 293 315 0.65

4 11 0.0074 0.42 11.4 2.2 1 23 323 345 323 345 0.99

5 11 7.7e-05 0.0044 17.6 1.2 1 23 351 373 351 373 0.96

6 11 2.2e-06 0.00013 22.5 1.9 1 23 379 402 379 402 0.98

7 11 0.00039 0.022 15.4 0.8 1 21 407 427 407 432 0.93

8 11 7.3e-05 0.0042 17.7 0.5 1 23 440 463 440 463 0.97

9 11 0.012 0.69 10.7 6.6 1 23 469 492 469 492 0.96

10 11 4.9e-06 0.00028 21.4 2.5 2 23 501 522 501 522 0.98

11 11 0.075 4.2 8.2 0.5 6 23 532 550 529 550 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00024	0.014	16.1	0.5	1	23	238	260	238	260	0.99
2	11	0.025	1.4	9.7	1.8	2	23	268	289	267	289	0.96
3	11	0.17	9.6	7.1	1.3	1	22	293	314	293	315	0.65
4	11	0.0074	0.42	11.4	2.2	1	23	323	345	323	345	0.99
5	11	7.7e-05	0.0044	17.6	1.2	1	23	351	373	351	373	0.96
6	11	2.2e-06	0.00013	22.5	1.9	1	23	379	402	379	402	0.98
7	11	0.00039	0.022	15.4	0.8	1	21	407	427	407	432	0.93
8	11	7.3e-05	0.0042	17.7	0.5	1	23	440	463	440	463	0.97
9	11	0.012	0.69	10.7	6.6	1	23	469	492	469	492	0.96
10	11	4.9e-06	0.00028	21.4	2.5	2	23	501	522	501	522	0.98
11	11	0.075	4.2	8.2	0.5	6	23	532	550	529	550	0.92

Sequence Information

Coding Sequence: ATGAGTGAATATAATTCTTGTTATAACGTGGACTTACAATATTTTTGTCACGCCTGTCTCAAAGCGAATGACGATGTTTATCCAATGACTTCAGAGGTTATTAACATTTATCAAAACTTAATTTTGAAAGAGCAGCAGGCAGATATAAAAACATACTATGTTTGTATATATTGTAGGCATACATTGAAAAAGTTGGCCAAGTTTGTTTTACAATGTCAAAAGGCTGCTGACATTTTAGTACAGCTATTAGAGAAGAAACCACAAACTGTACTGCCCCTCCAGACATTGGCCAGCCAAACACTAGAAAAGACTGCGACTGACATTAGTTATATAGGACCAATAGAGTTAAGCATAGATAATATAAAATATGAAGACAATGCGTATGACGATGACTTTCATACTGATGAAGATTTACCACTAGTGTTGTTAACTAGAAATGAAAGGAGTGATGTTAAAAATGAAACAAGTAAGAAGAAAAGAAAAAAATATGGAAAACTACATTTGAAAGAAAACACATCAAATCAAGAAGAACGATTGGTCGAAAAAAGGTATAAAAACTCTAAGGGGAAAAGACAGAAGACAGTAAGAGAGGGTTTTAGCTCGAGAATGGTTCAAGAAACAGAAGAATATTTGGTTATCAAATTGACCAAAGAACAGGTTTTGGAAGAGATGAAAGAGAGATCAAATAGTGAAAAATACAAAAGGTCTCTGTTCAAATGTGAGAAATGCGTTAAGGGATTCAATTTTGAAGATGTTCTGAGGGTACATATGGAGACGCATTCTAGGGAACGCGGTCCATTAATGTGCGACATATGCACGCAGTACTGTAAGACCACAGTTTCATTAAGGGGCCATATTAAATCTCATACGACAAGATATCAGTGTAAAGTATGCGGTGCAGTGCGTTTGTCGCGCCAACACTTGTTAGAGCATCACGCGTCTCACGCCGGCGGCGTCTTGCCTACGTACACTTGTGATTATTGCACTTACACCACTAGCAAACGCACCGTGATTCAGCGTCACGTGAGATCGCATGCGATCCGCGAGCGACACGCGTGTGAAATGTGCGGAAAGTTGTTTAAAAATTTGGAATCTTTGAGGGTGCATACACTACGTCACGACACAACAAAACACTTCCAGTGCGAACAGTGTAGCCGAAAATTTATCTATCAATCACTGCTCAATAAACACATGAAATCAGTTCATTTGCATGAAGATTTTTATTGCGTGGAATGCGATGTCAAATTCAAATCGCCGGAAAATCTACGACTACATTTTAGGAACGCAAAGCGTCATCGAGACGCCTCTTCGTTTAGGCACCAATGTCCCCAATGCGCGGAGAAATTCGCGACTAGTTCGACGCTGTCGGTACACTTGAGCACAGTGCACGGTGCGCCCAAACAGCACTGCTGCGACTTGTGCAGGCGACGGTACAGCAGCAGGGAGGCTTTGCGCTCGCACACAAGGAGGTTTCACGGCGGCGATAAGAAGCCGCAAGAGACGTGTCACATATGTCAGAAAACATTTGCGTACAAAAGCGTGTTGGCGAAACACCTGCGCACGCACACGGGTGAACGACCCTATACGTGTTTCTGCGGCGCCGCCTTCGCACAACACGCCACGCTCAGAGCTCACCAATTGGCCAAACACAAGTTTAACACCCATGTAAGATTGCGCTCCTTATCTCTACCCTCCTTAGTTGCAGGCAAGGAGAGAGGTAAGGAGGCCCCAACTCTATACACGGCTGCCTCGGGCGCACTTTGCCTCGGCCGAGCGTGCCTCGCGATCGAGCCATCGGCTGTCGGTAAACGGGCCGTGCTCAAAGGTGCCTCAGTGTCCGTTGTGCGTTCGGTGTGGACGGTCTGA
Protein Sequence: MSEYNSCYNVDLQYFCHACLKANDDVYPMTSEVINIYQNLILKEQQADIKTYYVCIYCRHTLKKLAKFVLQCQKAADILVQLLEKKPQTVLPLQTLASQTLEKTATDISYIGPIELSIDNIKYEDNAYDDDFHTDEDLPLVLLTRNERSDVKNETSKKKRKKYGKLHLKENTSNQEERLVEKRYKNSKGKRQKTVREGFSSRMVQETEEYLVIKLTKEQVLEEMKERSNSEKYKRSLFKCEKCVKGFNFEDVLRVHMETHSRERGPLMCDICTQYCKTTVSLRGHIKSHTTRYQCKVCGAVRLSRQHLLEHHASHAGGVLPTYTCDYCTYTTSKRTVIQRHVRSHAIRERHACEMCGKLFKNLESLRVHTLRHDTTKHFQCEQCSRKFIYQSLLNKHMKSVHLHEDFYCVECDVKFKSPENLRLHFRNAKRHRDASSFRHQCPQCAEKFATSSTLSVHLSTVHGAPKQHCCDLCRRRYSSREALRSHTRRFHGGDKKPQETCHICQKTFAYKSVLAKHLRTHTGERPYTCFCGAAFAQHATLRAHQLAKHKFNTHVRLRSLSLPSLVAGKERGKEAPTLYTAASGALCLGRACLAIEPSAVGKRAVLKGASVSVVRSVWTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386132;
90% Identity: -
80% Identity: -