Sfor020732.1
Basic Information
- Insect
- Synanthedon formicaeformis
- Gene Symbol
- -
- Assembly
- GCA_945859765.1
- Location
- CAMAON010000312.1:1-1970[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0015 1 9.6 1.3 18 40 75 94 70 97 0.80 2 10 0.0017 1.2 9.4 1.2 2 41 114 150 113 153 0.88 3 10 0.0041 2.9 8.2 5.3 2 29 143 168 142 182 0.82 4 10 1.2 8.1e+02 0.4 0.3 18 29 185 196 174 207 0.79 5 10 0.038 27 5.1 2.3 15 39 210 231 201 237 0.81 6 10 0.019 13 6.1 0.7 16 40 239 260 234 263 0.84 7 10 0.32 2.3e+02 2.2 2.4 17 33 268 281 260 292 0.73 8 10 0.24 1.7e+02 2.6 1.9 15 43 294 319 281 320 0.81 9 10 0.0014 0.96 9.8 0.1 16 44 323 348 321 348 0.91 10 10 0.0011 0.75 10.1 0.5 17 30 352 369 350 376 0.73
Sequence Information
- Coding Sequence
- AATAAGGTTTTAGATGAAGAGTTAAATGAAGATGTCAAAAATGAAGACTCAATTATAAATGAGGTTTTAGATGAAGAGTTAAATGAAGATGTCAAAAATGAAGACTCAATTATAAATGAGGTTTTAGATGAAGAGTCCAATGAAGATAGTGAAATGAAATCAGATGAAACCTTTAGTGATGCTGGTGTCAGTTTAAGAAAAGCAAACGACATACATGAGTATAAATGCGACATTTGCAATAAAACATTTAAACGCAAAGGGAATCTAGAAAATCACGTCAGAACTCACAAAGGATCTAAACGCCAAACATGCCAAACGATATTGTCGAATAAGAGAGAGAACGCGAAACATCATCAGTTGAAGGTTCGCATGGACAGACAGACACAAGAGTGCCAAGAGTGCGGTCGAAATTTCACAGGAAAAATAAACTTACTAAGGCATTGTCGAGAGATACACATAAAAAAGTACAGTTGCCGGTATTGCAATAAAAAAATTACGACAAAACCGAGATTGGTTGTACATGAAAGAACACACACGGGTGTAAAACCGTATGTCTGCGAAATATGTGATAAACCGTTTTATAGTAAAAGGGGTTTACTGGATCATAGTACAGTGCATTTGGAATATAAGTCTTTCACTTGTAATGTGTGCGATAAAGCATTCAAAAAGAAAACTCATTTAAACAGACACATGTTGACGCATACTGGGATAAAATCTTTCCAATGCAGTGTCTGTAGCAAGAGTTTTTCACGTAAAGATAATTTTAATAGTCACATGAAGGTCCATACGAGCGAAAGTCCTTACAAATGCAGCACTTGCAAGAAGACATTCAAATCCAAGCGGTATTTAAGGGAGCACATTTCGGTTGTACATTTGAGCTTTAAGCTTGACTGCGATATTTGCAAGGATACATTTAAATGCAGTAAGAGTTTAAGGGAGCACATGTCATTTGTACATTGGGGCTTTAAGTTTGTCTGCGACATTTGCGTGGCGGCATTTAAATACAAACAAAATTTAAAGGAGCACATATCGAATGTACATTCGGTCTTTAAGTTTGACTGCAACATTTGCATGAAGACTTTTAAATCCAAACGGTATTTAACCAGGCACACGTCGACTGTACATTTGCCCACTTAG
- Protein Sequence
- NKVLDEELNEDVKNEDSIINEVLDEELNEDVKNEDSIINEVLDEESNEDSEMKSDETFSDAGVSLRKANDIHEYKCDICNKTFKRKGNLENHVRTHKGSKRQTCQTILSNKRENAKHHQLKVRMDRQTQECQECGRNFTGKINLLRHCREIHIKKYSCRYCNKKITTKPRLVVHERTHTGVKPYVCEICDKPFYSKRGLLDHSTVHLEYKSFTCNVCDKAFKKKTHLNRHMLTHTGIKSFQCSVCSKSFSRKDNFNSHMKVHTSESPYKCSTCKKTFKSKRYLREHISVVHLSFKLDCDICKDTFKCSKSLREHMSFVHWGFKFVCDICVAAFKYKQNLKEHISNVHSVFKFDCNICMKTFKSKRYLTRHTSTVHLPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01386956;
- 90% Identity
- iTF_01386956;
- 80% Identity
- iTF_01386956;