Sfor008362.1
Basic Information
- Insect
- Synanthedon formicaeformis
- Gene Symbol
- SNAPC4
- Assembly
- GCA_945859765.1
- Location
- CAMAON010000060.1:5157863-5160046[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.8 2.4e+03 -1.0 0.0 4 18 166 180 164 181 0.89 2 6 0.98 8.3e+02 0.5 0.0 21 37 242 258 235 265 0.87 3 6 7.1e-10 6e-07 29.7 0.3 1 45 273 319 273 320 0.95 4 6 3.4e-08 2.8e-05 24.3 0.2 2 44 327 373 326 375 0.93 5 6 2.3e-07 0.0002 21.7 0.0 1 41 379 419 379 421 0.95 6 6 8.7e-06 0.0073 16.6 0.0 2 46 429 475 428 475 0.90
Sequence Information
- Coding Sequence
- ATGGAATTTAATGAAAATTCATTTGACTTGTCCGAAGTCGATATGAACTCGGATATCGACGAGGAGAAAATGAGTATAATAAGAATATTACACGATCTGAAAGTTGCCAGAGTGGTACATAGTAGGTCGTCTATGAGTTCGGATTACCCAGGTACTAGTTCATACATCGGGACCAGGTGCCCTTCGCCGGAACCGTCTGAACAAGAGAAAGTTTCCAAGGCTCTACAACTGAACTTCTCGCTAGACGAAAAATTGAAGGAACTTAGTGAAATGTTGAGCGAACGACTTGTTTTTTGTCAACAGAAGTTAACAGAGATTGAGGAGATCAGAAGAAACTTCAAGAAGGAAACTAAGGAAACGCCAAACAAATATATTAGGAGTTCTAGATCTTACTTTAAAGATAAACGGAACTTTCCACCTCCAGACAATGAGGATACAATTTTCATGATAAATAATGAGATGTATGATTTCCGCCAAGTAGAATCGGTGCCTGGTTGGACGGTCACAGATCAGAGAAATTTTATAAAAATGATACGCCTCATGTCTATAGAAATCGCGAGGAGTAAGTTGAATTCGCAAATAGCAGCATTAAATCGTAGCTATAAGGATGCTATAAAGACAGAAAAGACAAATATCAAAAAGAAAATGGCTGCACTCAAGGAAGAGATTGATGATTTACCTAATAAAGAACTTAAAGATATAGCACTCCCAATACATGAAGACTATGATTGGGATAGGGTTGATAAATTCTTAGGAAGACATACTCCCAAGGAATATGAGTTCCTTTGGAAGACCTTTTTGCATCCATCTATAAATAAGAGCAGGTGGAGCAGCGAGGAGCACACTTCGTTGCAGAAAATAGCGGCGATGAATAACTATGAGAATTGGGAGAAAATTGCTAGAGAATTGAACACGGGCAGAAGTGAATATCAATGCTTTGTATACTACAGAACCAATGTGTGCAATTTAGGTCTCGGTCAAAAATGGACAATGGAGGAAGAGCAGTACCTTATGAGACTGATCAGGTATTATAAGGAGGGTCAGAATATTAACTGGGGCAAAGTAGCTTCCTGTATAGATAATAGGACAAAAATGCAAATTTACAACAAGTACTTTAGAATGATGGAAACTAGAAAGGGAAGGTTTGCTCAGGAGGAAGATGCGGTTTTACTTAAAGGTGTGGCAGAATTTGGTGCAAACTATAAGTACATGCAGAAATTTCTACCGGGTCGCTCCGTATCACAATTGCGTGTTCGGCATAAGTTATTGCAAAGGAATGAAACAATGCCATGGACCACGAGAGAAGATAAAATTCTCATGAAACTAATGTTGGATAAGAATTTTAAGGGAGGTTTTATCAAAGTTACCGAGTATTTGCCTGGAAAAGACAGAATCAATGTCAGATCGAGATTTAACACTTTATTGAAATGGATGAAGGCCAATCCTAATTTGGATTTGTCTGAAGCCCCCCGACGAGTAAGAAAATTTGAAAGGCAGAACGTAGAGGGAGAAGACTTTGGTACAGTTATTAGGAATTTACAACGAAGATTGAAGAGTGAAAATGATTGTGGAGATCTTTCCGCTGACATAATTGAAGATATCGATGACACCATAACTAAAGTAATTTTATCCAAAGATGACAGGACATTCAGAGGCTTAGAAGATAAATTGGAAGAGGCACTTGCGAAAGCTTGTTGTGCTGTTGACACAACAAATTTGAAGAAACTGTTTTTTCTCTTTAAGGTCGTTTTTGATAAAGAACACTTTAAAAACAGTATTTACAATGAGAAATATCCGAGTTTGTTAGAGAAGGAACGTGTACTAACAGTGAAATCATATTCGAGAAAGACCAAGAATCATACTATGAGTACAGATTGCGGGTTGGACATATGGGGCAATGCAAAATTGGGTAATTCAGACTATGTCCTTCCTCCGAACTTAGCTACAATATGTGGTCTTCTAAGGTTATTTAAATATTGCAATGAAAACAACGAAGACAAATGTGAACTTAATTCTACAGTTTTGATTAACAAAAACCCAATGCTTAGACAAAAAGTTTATCTTCTCCAAGAGAGATTTACTTTTCTTTTCCTGTGGCCTCTTCTTTTAAGTAAGAAGCCACCGAAAAACTTAACACCTGATGGTCCAAGTAATAATAATAACAATAATAATCAATCTAGATAA
- Protein Sequence
- MEFNENSFDLSEVDMNSDIDEEKMSIIRILHDLKVARVVHSRSSMSSDYPGTSSYIGTRCPSPEPSEQEKVSKALQLNFSLDEKLKELSEMLSERLVFCQQKLTEIEEIRRNFKKETKETPNKYIRSSRSYFKDKRNFPPPDNEDTIFMINNEMYDFRQVESVPGWTVTDQRNFIKMIRLMSIEIARSKLNSQIAALNRSYKDAIKTEKTNIKKKMAALKEEIDDLPNKELKDIALPIHEDYDWDRVDKFLGRHTPKEYEFLWKTFLHPSINKSRWSSEEHTSLQKIAAMNNYENWEKIARELNTGRSEYQCFVYYRTNVCNLGLGQKWTMEEEQYLMRLIRYYKEGQNINWGKVASCIDNRTKMQIYNKYFRMMETRKGRFAQEEDAVLLKGVAEFGANYKYMQKFLPGRSVSQLRVRHKLLQRNETMPWTTREDKILMKLMLDKNFKGGFIKVTEYLPGKDRINVRSRFNTLLKWMKANPNLDLSEAPRRVRKFERQNVEGEDFGTVIRNLQRRLKSENDCGDLSADIIEDIDDTITKVILSKDDRTFRGLEDKLEEALAKACCAVDTTNLKKLFFLFKVVFDKEHFKNSIYNEKYPSLLEKERVLTVKSYSRKTKNHTMSTDCGLDIWGNAKLGNSDYVLPPNLATICGLLRLFKYCNENNEDKCELNSTVLINKNPMLRQKVYLLQERFTFLFLWPLLLSKKPPKNLTPDGPSNNNNNNNQSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01385699;
- 90% Identity
- -
- 80% Identity
- -