Sfor004628.1
Basic Information
- Insect
- Synanthedon formicaeformis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_945859765.1
- Location
- CAMAON010000031.1:2834330-2853775[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.1 1.1e+04 -3.5 0.1 4 16 72 84 72 86 0.80 2 3 1.7e-15 2.2e-12 46.7 0.0 1 38 173 211 173 218 0.92 3 3 7e-19 9.2e-16 57.5 0.0 1 43 385 428 385 430 0.95
Sequence Information
- Coding Sequence
- ATGTTGGCTCGTCCTCGGCCGCTATTGGTCGAGGCCGCGAGTTTAGAATTAGAATGTGTAGACCCCACCATTTGGCGAGCGAGTCCTGCGTCGGAATCGGACAGCAGTTCAGTGTCGGGCGCAAAAAGTCCAGCTGGTGCACCGAACTTTCTCCAGCATTTATTACAGGTGCAATTACAAGCACAGACACCACAAGGCATAGCACAGTTTCAGCAGATGATAGCTGCGTTGACAGCTCTCAGTACGGGGCTGGTGTCTCCGGCCCTCACGCCTGCTTTCCTCATGCAGAGGTTGGTGCAAACGAGACAGCTTGATAGGCTACCGACGGATGTTGGAGACAAGGTGACCGCACCGAACTCGTCGCCAACACTCACCGAACAGCCCCTGGACCTAAGCGCAAAGTCTACTTCCAGCACTAGCGGCACTCCGCCTCCCGACGCTAAGACCCTTGACAATGCTAGATTGAAACGCTCTGCTTTAGAGAGTGCAGGCAACAGCGCGACCAAGCGAGCGTATACTGACGACGAACTGTCAGCTGCCATTAGAGACATACAGTCGGGAAGACTTGGCACCCGTAGGGCCGCTGTTGTCTATGGCATCCCGCGATCAACGCTACGAAACAAAGTCAACAAATTCGGTCATAGCTCCGAACAAGGACACGATTCTGAACCTGACAGCGAACCGGAACGGACCGAATCACCGCCATCCGTAATACTAAAAATCCCCACCTTTCCACCGCCTGATGACAAGAGTCCCTCGCCAGCTACTACTGGAACTACACCCGTCACACCAATAACACCTATTATTCCACCTCCACAACCGCCTCTAAGTGCGCCTTCCCAGTTACTCTTACCACCTTCAGTCTTCGTCGATCCGCCGTCGACTCAACATCTATTCACCTCCTTAAGTGACGTCATAGCTAAAAGTATAAGCCAGAAGTTCCAACAACCGCTAGACAGACCTCCACAACACAGCGACTTGTCTTTCATGAGAGCACCAGATAGACATGTGTCCGTAATAAAAACTCCGCCAGATAATCAAAGAAACTTTCCAACACCGAGTAATTCCAGGGCAGCGACAGCGAATAACAATGGTCAACCCGCTGCAGGTGGTAAAGGCACGAGGCCCAAGCGAGGAAAATACAGGAACTACGATCGAGACAGTCTAGTAGAAGCGGTGAAGGCGGTTCAAAGAGGTGAAATGTCAGTTCACAGAGCCGGTTCTTATTATGGAGTACCTCATTCAACGCTCGAATATAAAGTTAAGGAAAGGCATTTGATGAGACCGAGGAAAAGGGAACCAAAACCACCACAGGATGCAAAACCGCAGCCACCGAAACCGCCGCAACCTAACAAGCCGTCGAAACCATTTTCGAATGGACTCAACGGACCCGAAACGTCGGGATATCCACCAAGCTACCCTTTCTGGCCCGGCGCTGGTTTCGCCCATCCACCGGCCCCAGATTTATATGCATCCCAAATGATGCGCAGGCTACGCGAAGATGCACCACCGCCTGCTAATGGCTCGTTTCTTGAGGGCATCATAAGATCGAGTCTCGAGCGACCCGGCGCTGCGTTATTACAACGATTAACTGCGGAACCTCGGCCACCTATGACACCGACTCCGGATGCGCCAAGTCTACTGCGACGACTGGCCGGTGAGCCCTCATCTGAAGATTCCCCACCGGCAAGGCGCCCTCGTATGGACAGCTCGGACTTAACCGATCGCACCGATAGTTTCCGCCTAGCGGCGGAGATGAGAGAAGCAGTACAAAAGCTGCGAGCGGATAAAATGAGGCCCAGGAACGGTACACCGACGCCTCCTGGAGCTCTTTCCCCGCCGCCTGCACCACCAGCCGCACCCCCTGACCGCGCCTAG
- Protein Sequence
- MLARPRPLLVEAASLELECVDPTIWRASPASESDSSSVSGAKSPAGAPNFLQHLLQVQLQAQTPQGIAQFQQMIAALTALSTGLVSPALTPAFLMQRLVQTRQLDRLPTDVGDKVTAPNSSPTLTEQPLDLSAKSTSSTSGTPPPDAKTLDNARLKRSALESAGNSATKRAYTDDELSAAIRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGHSSEQGHDSEPDSEPERTESPPSVILKIPTFPPPDDKSPSPATTGTTPVTPITPIIPPPQPPLSAPSQLLLPPSVFVDPPSTQHLFTSLSDVIAKSISQKFQQPLDRPPQHSDLSFMRAPDRHVSVIKTPPDNQRNFPTPSNSRAATANNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAKPQPPKPPQPNKPSKPFSNGLNGPETSGYPPSYPFWPGAGFAHPPAPDLYASQMMRRLREDAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRPPMTPTPDAPSLLRRLAGEPSSEDSPPARRPRMDSSDLTDRTDSFRLAAEMREAVQKLRADKMRPRNGTPTPPGALSPPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341060;
- 90% Identity
- iTF_01341060;
- 80% Identity
- -