Sfor004310.1
Basic Information
- Insect
- Synanthedon formicaeformis
- Gene Symbol
- kn
- Assembly
- GCA_945859765.1
- Location
- CAMAON010000028.1:1417083-1434790[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-54 3.3e-50 171.2 0.0 11 138 114 231 105 239 0.91
Sequence Information
- Coding Sequence
- ATGTCGTGCCTCTCATCTCTGACGCTATCCTTCACACGCGCGCGCAACGGACGGTCTCTGAGGGAAACCGCTCACCAGACCCTCCATTATCATAAATCGAACCGCAAACTCGACACATATAGGAACTTGTTCGAATTTAAAAAAATATATAATGAACTAAACGCTGCGGCGGGCGGGTATACCGGCTCGCCGTGGCCACCGCTAGAACTGGATCCTGTGGGATGGCGGCAAAAGCTTTATCCGCCAGGAGCTCCCAGATCATCAGGTGGTCTGATGTTTGGTCTCCACCACCAGGAGGCGGCTGCAGGTCTTCACGCGCAGCCACGAGGTCCGGTCACATCACTCAAAGAAGAACCCCTCACCAGGGCGTGGATGACGCCAACTTCGTTAGTTGACAATACAAATAGCGTGGGTGTCGGTCGCGCACACTTTGAGAAGCAACCGCCGAGCAACCTGCGCAAGAGCAATTTCTTCCACTTCGTAGTAGCGTTATACGACCGCGCCGGACAACCGGTGGAAATCGAGAGGACAGCTTTTATTGGATTCATTGAGAAAGATCAAGAGGCTGAAGGTCAGAAAACTAACAATGGCATCCAATACAGGCTACAGTTACTTTATGCAAATGGTATCAGACAAGAACAGGACATATTTGTTCGGCTCATCGATTCTGTTACTAAACAGAGAAAGGTGGAGAAATGTGACATGCGCCCGCCCATACCGCCCATACCGCACCGCTCGCTCGAAGCACGCGCCGCCACGTGGCTATCACGTGTCCTGATTATCATCTCCGTCCGATTAGAGCCTAATCCCCCACGCCCACGGCCCCACAACTAA
- Protein Sequence
- MSCLSSLTLSFTRARNGRSLRETAHQTLHYHKSNRKLDTYRNLFEFKKIYNELNAAAGGYTGSPWPPLELDPVGWRQKLYPPGAPRSSGGLMFGLHHQEAAAGLHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQRKVEKCDMRPPIPPIPHRSLEARAATWLSRVLIIISVRLEPNPPRPRPHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -