Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020000711.1:769231-775871[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.012 0.74 10.8 1.3 1 23 286 308 286 308 0.96

2 12 0.0018 0.11 13.3 3.3 2 19 316 333 315 337 0.91

3 12 0.75 47 5.1 4.0 1 23 341 363 341 363 0.97

4 12 0.033 2 9.4 3.1 1 23 368 391 368 391 0.97

5 12 0.00056 0.035 15.0 0.1 1 23 395 418 395 418 0.94

6 12 0.017 1 10.3 0.2 2 21 437 456 437 461 0.92

7 12 0.0015 0.091 13.6 1.0 3 23 471 492 471 492 0.98

8 12 0.4 25 6.0 0.9 2 23 512 534 512 534 0.96

9 12 7.8e-06 0.00048 20.8 0.9 1 23 545 567 545 567 0.99

10 12 2.5e-05 0.0016 19.2 1.3 1 23 573 595 573 595 0.98

11 12 0.00033 0.02 15.7 0.3 1 23 601 623 601 623 0.98

12 12 5.7e-05 0.0036 18.1 0.2 1 23 629 652 629 652 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.012	0.74	10.8	1.3	1	23	286	308	286	308	0.96
2	12	0.0018	0.11	13.3	3.3	2	19	316	333	315	337	0.91
3	12	0.75	47	5.1	4.0	1	23	341	363	341	363	0.97
4	12	0.033	2	9.4	3.1	1	23	368	391	368	391	0.97
5	12	0.00056	0.035	15.0	0.1	1	23	395	418	395	418	0.94
6	12	0.017	1	10.3	0.2	2	21	437	456	437	461	0.92
7	12	0.0015	0.091	13.6	1.0	3	23	471	492	471	492	0.98
8	12	0.4	25	6.0	0.9	2	23	512	534	512	534	0.96
9	12	7.8e-06	0.00048	20.8	0.9	1	23	545	567	545	567	0.99
10	12	2.5e-05	0.0016	19.2	1.3	1	23	573	595	573	595	0.98
11	12	0.00033	0.02	15.7	0.3	1	23	601	623	601	623	0.98
12	12	5.7e-05	0.0036	18.1	0.2	1	23	629	652	629	652	0.98

Sequence Information

Coding Sequence: ATGAATACTACGGGAGACGTGGAAGTATGCCAGATGTGCCTAGTTATGGACGTCAAATTGTATAATATGCTGACATACTCTTTAGAGATGTATCTCGAGCCCATTATTGGTTACAATCCCTTAAGCGCATTTGAACTGCCACCATACGTTTGCTATGAATGCACTTCGCTAGCGAGAAAATACTACTTATTCAAAGAGAGATGCCTTAGGGGTCAGCGGGCTTTGTATGACATTCTTCATCAAAACGGAAAGATTACAGTCAATCACATTAAAGAAATCGATAGAGATAGTTTTGAATTAACTTCCAATCTTAACATTAAAGTGGTTATTGCAGAGGAGTTTTTTGGTTCAGATTATGTGGAATTAGAATTTGATATAAAGAAAGAGATAGAGAAAGATGACGACAACGATGACTATTTTAAACAAGATTATGATTCAATCCAACCAATGTCAGTATCAAGTGATGATGAATTGCTGTCACTGCATAAAACTAAAGAGAGGAATGTTAAGAAAAAAGAAGAAATGAAAAAAGGGAAGAGAGAAAAGGATTTTGAGAAGACAGAAGAACCTCACGAACAGTTACAAGATATGGAATTAAATAAAGATGTGTCGCCTCTGTCGGCTGAAATACTTGACAATGTGAAAGTTAAAGCAAAAAGAGGACGACCCAGGAAAAGGGACAGCGTGAAGATAAAGCCAAAGGAAGAGAAATGTCGACGGACTAAGAACACTGGTGGCGTTGGGGTGGAGGAGATTGATCTCGAAGAATATGTGACTGTAATTAAGCTATCTATGGAGGAGCAAATCGCAGAAATAAACAACCGGAAAAACTCGTCGAACTACCAAAACGCGCCTTTCCAATGTAACCTGTGCTACAAGGGCTTCATCAAAACGGACGCCTGGCAGCATCACGTTGGAAAACACGACCCGAAAGCGGGCGATATAGAGTGTCCAATTTGTAAATTCCGGTTCAAAACGAAACGTACTCTGCAAAAGCACTGCATTAACCACGAGAAGAAGTATGCTTGTAAAACCTGCTCTCATATATCAAAAACTGCAACTCAAGCCAAACAGCATCACAGATGGCATAAAGGAGTGACATACAAATGCCAGTACTGCGACGAAGTTTCCACTAAATCGACTTCGCACTTGAGTCACATGAGGATAAAGCATCCGTCGGAGTTCATATGTGGCGTTTGCGGATACTCGTTCGTCAGCAAACAGGGACTCGCCATGCACAAGACCATGATGCACAAGGACGTCGTGGAAAACTTGGAGAGTAAGAAGGATGAAAAGGAAGAGGGTCCGTACTGTACGGAGTGCGATGTACAATTTATATCCACTGAGGCATGGAAGAGACACATGGTGACGTCCGCTAAACACACACAAATCAAGAATTTCAACACCGGGTGTCGCGTGTGCGGCGAGACATTCCCCAACGGCAAAGAGCTGAGGATGCACCACCGCATGGAGCACGCCCGCAAACGCCCCAAGAAGTGCGGCAAGAAGCCTTCCACCCACTCCTGGCCTGCCTCCTGTGAACACTGTTCAGTGGAGATATCGAACGCCCGAGATTACTGGACTCACTTCCGTCGCGAACACCCTGACAAAAACTATCCCATACAGAAGAACTACGTGTGCGATATATGTGGCAAGAGCTTCAGGGGCAACACGTTCCTGGTGTACCACAAGCGGACCCACTCGACGGAGCGCGCTTACAAGTGCGCGCAGTGCCCCAAGGCCTTCTTCAACCGCACCAACCTGCAGATGCACGAGAAGTCTCATTCCGACAACCGGCCCTACCCCTGTTCCGTCTGCCTTAAGGCCTTTAAGGGCAAGGGCGCGCTCGACAGGCATTTTCGGAGTCACACTGGTGTGAAGCCGTACGTGTGCGAGGTGTGCGGCAAAGCGTTCGGTCAGTCCAACAGTCGGAAGCTGCACGTGCGCACCGTCCATATGAAGCAGCCCACGCCCTACGTCAGCAAGACTCGCCTCGAGAGGCGCAACAAAGTTCCTCCTCCCAAGGACTCTTAG
Protein Sequence: MNTTGDVEVCQMCLVMDVKLYNMLTYSLEMYLEPIIGYNPLSAFELPPYVCYECTSLARKYYLFKERCLRGQRALYDILHQNGKITVNHIKEIDRDSFELTSNLNIKVVIAEEFFGSDYVELEFDIKKEIEKDDDNDDYFKQDYDSIQPMSVSSDDELLSLHKTKERNVKKKEEMKKGKREKDFEKTEEPHEQLQDMELNKDVSPLSAEILDNVKVKAKRGRPRKRDSVKIKPKEEKCRRTKNTGGVGVEEIDLEEYVTVIKLSMEEQIAEINNRKNSSNYQNAPFQCNLCYKGFIKTDAWQHHVGKHDPKAGDIECPICKFRFKTKRTLQKHCINHEKKYACKTCSHISKTATQAKQHHRWHKGVTYKCQYCDEVSTKSTSHLSHMRIKHPSEFICGVCGYSFVSKQGLAMHKTMMHKDVVENLESKKDEKEEGPYCTECDVQFISTEAWKRHMVTSAKHTQIKNFNTGCRVCGETFPNGKELRMHHRMEHARKRPKKCGKKPSTHSWPASCEHCSVEISNARDYWTHFRREHPDKNYPIQKNYVCDICGKSFRGNTFLVYHKRTHSTERAYKCAQCPKAFFNRTNLQMHEKSHSDNRPYPCSVCLKAFKGKGALDRHFRSHTGVKPYVCEVCGKAFGQSNSRKLHVRTVHMKQPTPYVSKTRLERRNKVPPPKDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386110;
90% Identity: iTF_01386110;
80% Identity: -