Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020001250.1:9203-12639[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00034 0.021 15.6 0.1 1 23 31 54 31 54 0.96

2 18 0.05 3.1 8.8 0.1 2 23 85 107 84 107 0.95

3 18 0.0052 0.32 11.9 1.0 2 23 130 152 130 152 0.96

4 18 0.0013 0.081 13.8 1.5 1 23 157 180 157 180 0.95

5 18 0.076 4.7 8.2 0.7 1 23 185 208 185 208 0.92

6 18 0.00073 0.045 14.6 0.9 2 23 214 236 214 236 0.94

7 18 0.00016 0.01 16.7 0.1 2 23 244 266 243 266 0.97

8 18 0.038 2.3 9.2 0.1 2 23 273 294 272 294 0.96

9 18 0.68 43 5.2 5.9 1 19 347 365 347 370 0.90

10 18 0.36 22 6.1 0.0 3 23 399 420 397 420 0.92

11 18 0.044 2.7 9.0 0.2 2 23 443 465 442 465 0.96

12 18 8.9e-05 0.0055 17.5 1.2 1 23 470 493 470 493 0.94

13 18 0.0084 0.52 11.2 4.7 1 23 496 519 496 519 0.95

14 18 0.26 16 6.6 0.3 3 23 527 548 526 548 0.94

15 18 0.0041 0.25 12.2 1.0 2 23 556 578 555 578 0.95

16 18 0.24 15 6.7 0.9 1 23 583 605 583 605 0.97

17 18 1.5e-08 9.3e-07 29.3 1.4 1 23 611 633 611 633 0.99

18 18 0.12 7.5 7.6 0.3 2 23 640 662 640 663 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00034	0.021	15.6	0.1	1	23	31	54	31	54	0.96
2	18	0.05	3.1	8.8	0.1	2	23	85	107	84	107	0.95
3	18	0.0052	0.32	11.9	1.0	2	23	130	152	130	152	0.96
4	18	0.0013	0.081	13.8	1.5	1	23	157	180	157	180	0.95
5	18	0.076	4.7	8.2	0.7	1	23	185	208	185	208	0.92
6	18	0.00073	0.045	14.6	0.9	2	23	214	236	214	236	0.94
7	18	0.00016	0.01	16.7	0.1	2	23	244	266	243	266	0.97
8	18	0.038	2.3	9.2	0.1	2	23	273	294	272	294	0.96
9	18	0.68	43	5.2	5.9	1	19	347	365	347	370	0.90
10	18	0.36	22	6.1	0.0	3	23	399	420	397	420	0.92
11	18	0.044	2.7	9.0	0.2	2	23	443	465	442	465	0.96
12	18	8.9e-05	0.0055	17.5	1.2	1	23	470	493	470	493	0.94
13	18	0.0084	0.52	11.2	4.7	1	23	496	519	496	519	0.95
14	18	0.26	16	6.6	0.3	3	23	527	548	526	548	0.94
15	18	0.0041	0.25	12.2	1.0	2	23	556	578	555	578	0.95
16	18	0.24	15	6.7	0.9	1	23	583	605	583	605	0.97
17	18	1.5e-08	9.3e-07	29.3	1.4	1	23	611	633	611	633	0.99
18	18	0.12	7.5	7.6	0.3	2	23	640	662	640	663	0.94

Sequence Information

Coding Sequence: ATGGCCCAAAAGTTGATGATAAAGCGAAGAAATTTGGAGTATATTTTACAGTACAGCAACGTCACACCTTTCATGTGGTACAAGGCGAAGTATCGGTGCTTCTACTGCGCCGAACCGTTCAAAGATCCCGACCTCCTCAAGGAGCACACGGCCAGTGTACACCAATTCGCCAATTTAGAACTGGTCATATTCGACAGAACCAAAAAGAATAGGAACCGCGATGCGGCAGTCAAGATTGATGTGACCAATATTGTTTGCAAGCTGTGTAATCAGCCAATAGAAAACTTGGAGCAGCTGATTCACCATTTGATCATAGCTCACGATGCAGAATACGACGTGAGCGTTCCAAATTGCTTGCTGCCCTTCAAACTCGACAAGGAATCGCCTACCTGTCCCACGTGCAATACAAAGTTTGTCTTCTTTGAATACCTCCTGCGACATGCCAATAAATACCACCTCTCCCACGACTACATATGTGATATATGCGGAACAAGTTTCCAAGGAGAAAACCACCTGAAGATGCACAATAGATATTATCACAGGGAAGGCGGTTACACTTGCGATCATTGCGGTGTGACTCTGGTGACTCTGTCGAAGAAAATACTCCACGAGAAGAACGTTCATTTGGCCAATTTGGCGACGTGTCCCCATTGTCCAGAGACATTTAAAAGTCCATACTTTAAAAAGATACACATGGCTAACGTGCATGGGGTGGAGGAGTTGAAAATCAAATGTCCATATTGCCCGAAAGTGTATCCACAAGAGAGTATAATGTCAAGGCATATGAGACGCGTGCATTTGAGGGAGAAGAATGTTGAGTGTGAAGTATGCGGTGATAAGTTTTTCGGGTCGTACGACGTAAAATTGCACATGCTAAAGCACAATGGCGAGAAGAAATACGTTTGTCCAGTGTGCGGAGGAAAGAAAAAGCAAGATGTTAAGGAGAACTATATCGAACGACTTTCCAGCGTCCGAAGGAATGTTCAACTAATTCTTCACTACGGTAACGTCTTACCATTCAGCTGGAACACAAAAGGGTTCAGATGCTTCTACTGCAGTAAAGTAATCAACAACTGCGAACTGCTAAGGAAACATTGTATTAGAAATCATTCTGGTATCGATCTGACAACGTTCATACCCCAAAGAATCATAACCAAGGATATACCTCTAAAAATTGATGTGATCGATCTTGCATGCAAAGTTTGCAACGAGGAAATGAAGGACCTGGGAGATTTAATCGAACACATAGTAATATTCCACGGAGACTACTACGACAAATCAGCTGAAAACTGCTTTATTCCGTTCTGGCTGAAAAAGGATTCAATACAGTGCGTTCTATGTAAGAAACAATACGACAATTACGCATCCATTGTGATTCACATGAACAAGGAGCATATACCTCATTCGTTCATTTGCCAAGTGTGCGGCGAATCTTATGCGAGAAATGTGAAGCTTCAAAAACACATAACGAATTGTCATCTTGGCCATAAGTGCAGCAAGTGTGATAAGGTGTTTGACGCACTTCACAAATTTAACCGTCACAATAAAGTGGTTCATGGCAAGGTCACGGAGCGTGCTTGCAGTTTGTGCAGTAGCACGTTCGAAAGTGACTATCAATTCAAAGTGCACTTGGGCAAAGTGCACAATGTGGAGAAGTTTAAGATAAAATGCAAGTTGTGCCCGAAAATTTGCACGACCAAGGGCGCGATGAGGCTTCACGAGCAGTCTGTCCATCCGGTAGTGAAATTCCAGTGCGATTTATGCGACTACAAAACGGGAATTAAATGGATGATTAAATTACACAGGCGCAAACATTTTGGGGAGAGAGATTATACTTGTGGCATTTGTGGCAAATGTTTCGGTAGAGCGAGTAATTTGAGGACGCACATGAAAGTGCATACTGGTAACGTAGGCAGAGTGTGTAGATGGTGTCGCCAAGGATTCGTTGATGGTGATGCTCTGAAGGAGCATGAGAGAAATATACATCACGAGCAAATGTGA
Protein Sequence: MAQKLMIKRRNLEYILQYSNVTPFMWYKAKYRCFYCAEPFKDPDLLKEHTASVHQFANLELVIFDRTKKNRNRDAAVKIDVTNIVCKLCNQPIENLEQLIHHLIIAHDAEYDVSVPNCLLPFKLDKESPTCPTCNTKFVFFEYLLRHANKYHLSHDYICDICGTSFQGENHLKMHNRYYHREGGYTCDHCGVTLVTLSKKILHEKNVHLANLATCPHCPETFKSPYFKKIHMANVHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGSYDVKLHMLKHNGEKKYVCPVCGGKKKQDVKENYIERLSSVRRNVQLILHYGNVLPFSWNTKGFRCFYCSKVINNCELLRKHCIRNHSGIDLTTFIPQRIITKDIPLKIDVIDLACKVCNEEMKDLGDLIEHIVIFHGDYYDKSAENCFIPFWLKKDSIQCVLCKKQYDNYASIVIHMNKEHIPHSFICQVCGESYARNVKLQKHITNCHLGHKCSKCDKVFDALHKFNRHNKVVHGKVTERACSLCSSTFESDYQFKVHLGKVHNVEKFKIKCKLCPKICTTKGAMRLHEQSVHPVVKFQCDLCDYKTGIKWMIKLHRRKHFGERDYTCGICGKCFGRASNLRTHMKVHTGNVGRVCRWCRQGFVDGDALKEHERNIHHEQM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -