Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020001250.1:1-7178[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 0.024 1.5 9.8 0.9 1 23 35 57 35 57 0.97

2 34 0.099 6.1 7.9 0.2 2 23 82 104 81 104 0.93

3 34 0.87 54 4.9 0.1 6 23 129 146 125 146 0.95

4 34 0.24 15 6.7 0.0 2 23 275 297 274 297 0.94

5 34 0.059 3.7 8.6 0.5 3 23 321 342 320 342 0.95

6 34 9.6e-05 0.006 17.4 2.1 1 23 347 370 347 370 0.97

7 34 0.22 14 6.8 1.8 2 23 376 398 375 398 0.92

8 34 0.12 7.2 7.7 0.0 3 23 491 512 489 512 0.94

9 34 0.081 5 8.2 1.8 2 23 533 555 532 555 0.94

10 34 1.3 78 4.4 7.0 1 23 560 583 560 583 0.94

11 34 0.16 9.7 7.3 0.5 1 23 588 611 588 611 0.92

12 34 0.75 47 5.1 0.6 2 23 614 636 613 636 0.94

13 34 0.3 19 6.4 1.1 2 20 643 661 639 663 0.90

14 34 0.003 0.18 12.7 2.4 1 23 706 729 706 729 0.91

15 34 1.1 68 4.6 0.2 2 23 758 780 757 780 0.94

16 34 0.00034 0.021 15.6 0.3 1 22 802 823 802 825 0.90

17 34 0.00012 0.0074 17.1 0.2 3 23 832 853 831 853 0.96

18 34 0.0023 0.14 13.0 0.8 2 23 859 881 858 881 0.94

19 34 0.12 7.4 7.6 0.9 1 23 886 909 886 909 0.95

20 34 0.00084 0.052 14.4 4.2 1 23 913 936 913 936 0.97

21 34 1.8 1.1e+02 3.9 3.9 1 23 982 1004 982 1004 0.95

22 34 0.0029 0.18 12.7 0.7 1 23 1074 1097 1074 1097 0.96

23 34 0.00037 0.023 15.5 2.1 2 23 1103 1125 1102 1125 0.96

24 34 0.0028 0.17 12.7 2.9 1 23 1130 1153 1130 1153 0.97

25 34 6.2e-06 0.00039 21.1 0.8 3 23 1157 1178 1156 1178 0.97

26 34 1.1 66 4.6 7.2 1 21 1184 1204 1184 1205 0.94

27 34 3.6 2.3e+02 3.0 2.7 1 23 1258 1281 1258 1281 0.94

28 34 3.1 1.9e+02 3.2 0.1 2 23 1354 1377 1353 1377 0.92

29 34 0.00014 0.0087 16.8 2.3 3 23 1384 1405 1383 1405 0.93

30 34 0.019 1.2 10.1 1.6 2 23 1410 1432 1409 1432 0.94

31 34 0.082 5.1 8.1 2.8 1 23 1437 1460 1437 1460 0.94

32 34 0.00012 0.0077 17.0 5.7 1 23 1464 1487 1464 1487 0.97

33 34 0.00073 0.045 14.6 0.3 2 23 1494 1515 1493 1515 0.96

34 34 0.013 0.8 10.7 1.2 1 23 1521 1543 1521 1543 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	0.024	1.5	9.8	0.9	1	23	35	57	35	57	0.97
2	34	0.099	6.1	7.9	0.2	2	23	82	104	81	104	0.93
3	34	0.87	54	4.9	0.1	6	23	129	146	125	146	0.95
4	34	0.24	15	6.7	0.0	2	23	275	297	274	297	0.94
5	34	0.059	3.7	8.6	0.5	3	23	321	342	320	342	0.95
6	34	9.6e-05	0.006	17.4	2.1	1	23	347	370	347	370	0.97
7	34	0.22	14	6.8	1.8	2	23	376	398	375	398	0.92
8	34	0.12	7.2	7.7	0.0	3	23	491	512	489	512	0.94
9	34	0.081	5	8.2	1.8	2	23	533	555	532	555	0.94
10	34	1.3	78	4.4	7.0	1	23	560	583	560	583	0.94
11	34	0.16	9.7	7.3	0.5	1	23	588	611	588	611	0.92
12	34	0.75	47	5.1	0.6	2	23	614	636	613	636	0.94
13	34	0.3	19	6.4	1.1	2	20	643	661	639	663	0.90
14	34	0.003	0.18	12.7	2.4	1	23	706	729	706	729	0.91
15	34	1.1	68	4.6	0.2	2	23	758	780	757	780	0.94
16	34	0.00034	0.021	15.6	0.3	1	22	802	823	802	825	0.90
17	34	0.00012	0.0074	17.1	0.2	3	23	832	853	831	853	0.96
18	34	0.0023	0.14	13.0	0.8	2	23	859	881	858	881	0.94
19	34	0.12	7.4	7.6	0.9	1	23	886	909	886	909	0.95
20	34	0.00084	0.052	14.4	4.2	1	23	913	936	913	936	0.97
21	34	1.8	1.1e+02	3.9	3.9	1	23	982	1004	982	1004	0.95
22	34	0.0029	0.18	12.7	0.7	1	23	1074	1097	1074	1097	0.96
23	34	0.00037	0.023	15.5	2.1	2	23	1103	1125	1102	1125	0.96
24	34	0.0028	0.17	12.7	2.9	1	23	1130	1153	1130	1153	0.97
25	34	6.2e-06	0.00039	21.1	0.8	3	23	1157	1178	1156	1178	0.97
26	34	1.1	66	4.6	7.2	1	21	1184	1204	1184	1205	0.94
27	34	3.6	2.3e+02	3.0	2.7	1	23	1258	1281	1258	1281	0.94
28	34	3.1	1.9e+02	3.2	0.1	2	23	1354	1377	1353	1377	0.92
29	34	0.00014	0.0087	16.8	2.3	3	23	1384	1405	1383	1405	0.93
30	34	0.019	1.2	10.1	1.6	2	23	1410	1432	1409	1432	0.94
31	34	0.082	5.1	8.1	2.8	1	23	1437	1460	1437	1460	0.94
32	34	0.00012	0.0077	17.0	5.7	1	23	1464	1487	1464	1487	0.97
33	34	0.00073	0.045	14.6	0.3	2	23	1494	1515	1493	1515	0.96
34	34	0.013	0.8	10.7	1.2	1	23	1521	1543	1521	1543	0.98

Sequence Information

Coding Sequence: GAAACCCAACAGAAAGCGGACAGCGATATAACAGCGCTGCGACGAAACCTTCAAACGTTGTTTAACAACACAACTGTCATACCTTTCGAGTGGAGGCAACATTACATTTGCTTTTATTGCGATCAGAAAATACCCTCTTACGATACACTTCGACAACACACTAAAGAACACGGAGAAAATAGTCGAAGTTATCTAAAAGGCGTGAAAATTAATTTTGATTTGAAAGTGGACGTTTCTTTTTTGAATTGTCAAATTTGTAATTCGAAATTTATCAGTACGGCCACGTTAATTGATCATTTGAATGATTCTCACGGTTTATCATGTGATAAAAGAATAATTGATCACATTAATCAATGCAATCTTAAAAGTGTAAGTTGCATCGCTTGCGATGTGAATTTCGCTAATATTACAAATCTCATGAGTCACATTGTAAAACACAGTAAGTTAGTTAAGAAATGTAATGAAGGACCAAAAGTTAAATTTATTAATATAAAAAGTGAACGCGACGAAACAGAATCAAAAGAAATATTTAACGTTAATAAAGAAGGCAAAAGAAAAACTACAGGCGGTCAAAAGGAAATGAGAGAGAATGCTATAAAAATGAGAGACAACATAGCTCTTTTATTAAATTCGTCCACAGTTACACCATTCAAGTATTATATGAATAGATTTCGGTGTTTTTATTGCGGACTGGATGATATTCATTACGAGATTGTGAAGAATCACACAAAACTTACACACACTTACTGCGATCCGTCCGAGAAATACATGAAAAAATTGAGAGGAAAAGATGTTAACATCAAATTGGATGTCGCAGATGTAACTTGTAAAATATGCGGGATCTCTCTTGACGGTTTAAATCTTTTAATAGACCATTTGATATCAGTACACGGAGAAAGCTATGATAGGTCAATCACTCGTCTACTGATACCTTTTAAAATGATTAAAAACGGGACACTATGTCCGGTGTGTCAAATGTCTTTTCAATATTTTGGCAAGTTACTAAAACATTTGAACGATTTTCACTCTGATAACAATTTCGTTTGCGTGCATTGTGGACAAACGTTTAGAAACAGTCCCAATTATAGGGGTCACATGTCTCGTTACCACAGAATCGAAGCGTGTAAATGTCCCGAATGTTTTCTAGATTTTCCAAATCATGCCAAGTTGGCACTCCACCGAGCAAATAACCATAAAGTTAAGTCGAAAAAGTGTACGAAATATGAAAACGACCATGCATCTGGCTATGAAAAGAGGAGGACAAATCTGGAAATTTTGTTCAACTATACAACATTGATACCTTTTAAATGGCGTTCGAAGTATTTGTGTTTTCACTGTTGCACTGACGTAGAATATAGAGAATTGAGAGACCATACAAAAGCCCATGGACACTGCACGTCAAATGACAAAGCCATAAGAGACGTGAAAGGAAAAGATGTCGAAGTTAAAATAGATGTTTCACACATTGCATGTGAAATATGTAATGAGCCTTTTGAAAATTTTGATGAAATCATAGATCATTTGATCGTTAAACATAAATTGCCCTATAACAAGAACGCAGAATTGACTCTACAGCCGTATAGATTGGTAGATTTGAAGTGTTTGCTATGCGACGAACATTTTAACTTCTTCAGTAAATTGATAGTTCACGTTAACAATAAACATCCGAAACACGAGTTTCGTTGTGATTTTTGTAAACATACTTTCAATAAGAAACGGGATATGGCCGCGCATTGTAGAATGTATCACAAGGAGGAGGGTTATAATTGTGAGGAGTGCTTATTAAACTTTACATCAGTGAATAGCTTGAGAAGTCATAACACTTCCGTTCATCCGTCGATGTGTAACATTTGCTTTAACTCGTATCCAACGGTAAGGAATAAATTGCGGCACATAAAACTCGATCATGACGGGCAATGTCCGGTTAAATGCGGGTTTTGTTTGAAACTATTCAGCACAAATAAGAGTTTTATCAAACACGCCGAGTCATGTACCAAGGAACTGTCTAAAGGTGGAGATGATGTGGGTAAAACGCAAATCAAGCAGATACGAAACAATTTAGCGTGTCTACTAAACATGTCTACCGTCATACCGTTTAAGAATTTCTTGAATAGGTTTCGATGTTTTTACTGTCCTAAAGATTTCACTGAATGCTCGGAACTAAAAGAGCACACTGTGCTAGAACATCCGCATTGTGATATTAAGTTGAAGAGTATGAAATTAAGGAATAGAGCCAGACACGAGGGAGTTAAAGTTGATGTTTCCTCTCTATCGTGTAAAGTGTGCTGTGAAAGTTTTGATGAATTGGATCTCCTGATCGATCACCTAATCGTTGAGCACAATGCTCGATACAATAAGGCTGTTGATCTGAGCTTGTTGCCATACAAGTTAATTAAAGATAATTATCCGTGTCCATATTGCAGCGAAGTTTTTAGATATTTTAGCACTTTATTAAGGCACGTGGGCCTCAGTCATACGGACAATAGAAACCTTTGCGTATATTGTGGTAAATCCTTTAGAACAGACGCGAGTCTGAGGGTTCATATAGCGTCGTATCACAAAACTAAAAGAATTAAATGCCCCAATTGCTCTATCCGATTCACAACCAATAACGCCCTGCATTCCCATCTAGGAAAAGCTCACGGCAAAAAAATATTCAGATGTTCGAAGTGTTCAGAGAAATTTGTATCAGATTACGCAAAGTTGAAGCATCTGATCGTCACCCACGGTTCGGGACATAAATGCGAATACTGTGGCAAGTTGTTTACAAAGAAATCCTTCATGGTGAATCACGTCAGACGCACTCATTTGAAGGAGAAGaatgtcgagtgctctgtgtATGCATACGAAGGGACGTATGAAAGGACCGCTGAACGCAGAAGGAAAAACTTGCAAATACTATTTAACAATACATCTGTCATACCGTTCAAATGGCGCGGACGTTACCTCTGTTTTTATTGTGGAGAGAACCATACGAATTATACAGATTTCAGAAAGCATACGTTATCTCACGGTCCGTGTTCCACAAAAGATTATTCGCTCAAAGTGATAAAGGGAAATCACATTGAGATCAAAGTGGACGTGTCCGATATCACCTGCATTGTGTGTACTGAGCCTTTTAATAGTTTCAAGGAGATAATTGATCATTTGATCATAAAACACAGTTTAGAATACGATAGTAATATCGATACTCCATTCCAAGAGTACAGATTGGTCGATTTCAGATGTCTTTTGTGTGATAAGCAGTTTTCCTACTTTGGTTATTTGGTTCAGCACGTGAACAACGCGCATCCGAACAATTGCTTAGTTTGTCACGATTGTAAAGCAACTTTCAATAAGAAAAGAGATCTGAGTGTTCACATTAGGAATTTTCATAGGCAGGGTGGCTACAAATGCGAATTGTGCATGAAGATTTTCAAATCGCTTTTCACTCTACGTAAACACCAGAAAAACATGCACTTTAGTTTTTGCAATATTTGCGGTCTTAGTTTCTCCTCGAACAGTCTCTTGCAGAAACACACACAGATGGATCATCCGGATAATGGTAGCTTCAAGTGTAATCATTGCGCCAAAACTTGCCATTCGTCGCAAGGGCTCAAGCAGCATTTCAAGAAATGCAAGACAAAACTTGCCTCGATTGAGCCAATGAAGAACCCTTTCTCAGAGGAGTGCGTGGAACCCAAAAAGAAACAGGACTTGCAACAGATTAGACTGAATATACAGTGTGTTTTAAATATGTCCACTGCGATTCCTTTCAAGTTTTTCTCCAGTTTTGCATGTTTTTATTGCTGCAAAAAGTTTGGTGAGTTCGAAGAGCTCAAGCAACATACGATCTCAGAGCATCCCGTGTGCGATGTCAAAGCGAATGCCATGAGAAATTGTAAAGGTGAAAGGATAACTATAAAGATAGACGTCACGTCGTTGGCATGCAAAGTTTGCTGCGTGACGGTTGATAATATCGATGATCTCGTAGACCATTTGATTAAAAAACATACGGCCAACTATGACAAGTCTATTACGGGTTGTTTCGAACCGTACCGTGTCATGAAAGACAACATGCCCTGTCCGATTTGTCCAGATCTAGTGTTTAGATACTTCAACATACTCCTTAGACACATGAACTCCGTTCACAACAACAATAATAGAATCTGCGACCATTGCGGTAGAAGTTTCAAGAGCGTGACCAATTTGAAAGTTCACATAGCTCACACGCACGTGGCTTCTAGTGAGTGCGACCTGTGTGGGGGCAAATTTAAGAATCAATGGTGTCTGTTACGACACAAGGCCAGCACGCACGACGTGAAAAGTTATAAATGCTCGAAGTGCCCCGAGAAGTTTCTCTCCCAATACCACAAGCAGAAGCATTTGATTGAAGTGCACAATATAGGCCACAAGTGCAGTTACTGTAGCAAAATGTTCACCCGAAACTCGTTCATGAAAGACCACATACGCAGGTCGCATTTGAAGGAGAAGAACGTCTCTTGCGGGATATGCAACGAGAAATTCTTCGACAATTATCTGTTGAAGTTGCACATGGTTAAACATTACGACGACAGGAGGTTTAAATGCGATGTGTGCGCAAAGGAGTTTCTGCGGCGCAGTAATTTGGATTCACACAAAAAATTGCATAAGAAATATGGACATATTGCGGCGCAAACTTAA
Protein Sequence: ETQQKADSDITALRRNLQTLFNNTTVIPFEWRQHYICFYCDQKIPSYDTLRQHTKEHGENSRSYLKGVKINFDLKVDVSFLNCQICNSKFISTATLIDHLNDSHGLSCDKRIIDHINQCNLKSVSCIACDVNFANITNLMSHIVKHSKLVKKCNEGPKVKFINIKSERDETESKEIFNVNKEGKRKTTGGQKEMRENAIKMRDNIALLLNSSTVTPFKYYMNRFRCFYCGLDDIHYEIVKNHTKLTHTYCDPSEKYMKKLRGKDVNIKLDVADVTCKICGISLDGLNLLIDHLISVHGESYDRSITRLLIPFKMIKNGTLCPVCQMSFQYFGKLLKHLNDFHSDNNFVCVHCGQTFRNSPNYRGHMSRYHRIEACKCPECFLDFPNHAKLALHRANNHKVKSKKCTKYENDHASGYEKRRTNLEILFNYTTLIPFKWRSKYLCFHCCTDVEYRELRDHTKAHGHCTSNDKAIRDVKGKDVEVKIDVSHIACEICNEPFENFDEIIDHLIVKHKLPYNKNAELTLQPYRLVDLKCLLCDEHFNFFSKLIVHVNNKHPKHEFRCDFCKHTFNKKRDMAAHCRMYHKEEGYNCEECLLNFTSVNSLRSHNTSVHPSMCNICFNSYPTVRNKLRHIKLDHDGQCPVKCGFCLKLFSTNKSFIKHAESCTKELSKGGDDVGKTQIKQIRNNLACLLNMSTVIPFKNFLNRFRCFYCPKDFTECSELKEHTVLEHPHCDIKLKSMKLRNRARHEGVKVDVSSLSCKVCCESFDELDLLIDHLIVEHNARYNKAVDLSLLPYKLIKDNYPCPYCSEVFRYFSTLLRHVGLSHTDNRNLCVYCGKSFRTDASLRVHIASYHKTKRIKCPNCSIRFTTNNALHSHLGKAHGKKIFRCSKCSEKFVSDYAKLKHLIVTHGSGHKCEYCGKLFTKKSFMVNHVRRTHLKEKNVECSVYAYEGTYERTAERRRKNLQILFNNTSVIPFKWRGRYLCFYCGENHTNYTDFRKHTLSHGPCSTKDYSLKVIKGNHIEIKVDVSDITCIVCTEPFNSFKEIIDHLIIKHSLEYDSNIDTPFQEYRLVDFRCLLCDKQFSYFGYLVQHVNNAHPNNCLVCHDCKATFNKKRDLSVHIRNFHRQGGYKCELCMKIFKSLFTLRKHQKNMHFSFCNICGLSFSSNSLLQKHTQMDHPDNGSFKCNHCAKTCHSSQGLKQHFKKCKTKLASIEPMKNPFSEECVEPKKKQDLQQIRLNIQCVLNMSTAIPFKFFSSFACFYCCKKFGEFEELKQHTISEHPVCDVKANAMRNCKGERITIKIDVTSLACKVCCVTVDNIDDLVDHLIKKHTANYDKSITGCFEPYRVMKDNMPCPICPDLVFRYFNILLRHMNSVHNNNNRICDHCGRSFKSVTNLKVHIAHTHVASSECDLCGGKFKNQWCLLRHKASTHDVKSYKCSKCPEKFLSQYHKQKHLIEVHNIGHKCSYCSKMFTRNSFMKDHIRRSHLKEKNVSCGICNEKFFDNYLLKLHMVKHYDDRRFKCDVCAKEFLRRSNLDSHKKLHKKYGHIAAQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -