Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: -
Assembly: GCA_936447275.2
Location: CAKZFQ020002641.1:23811-28292[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 8e-08 5e-06 27.0 1.3 2 23 204 225 203 225 0.98

2 16 0.001 0.064 14.1 0.1 1 23 228 250 228 250 0.98

3 16 1.7e-05 0.001 19.8 0.6 2 23 257 279 257 279 0.94

4 16 0.0015 0.091 13.6 0.5 1 23 285 307 285 307 0.98

5 16 5.4e-06 0.00033 21.3 2.3 1 23 313 335 313 335 0.95

6 16 4.7e-06 0.00029 21.5 5.8 1 23 341 363 341 363 0.99

7 16 0.0031 0.19 12.6 3.1 1 23 369 391 369 391 0.97

8 16 4e-05 0.0025 18.5 3.0 1 23 397 420 397 420 0.95

9 16 6.9e-05 0.0043 17.8 1.8 2 23 429 451 428 451 0.94

10 16 0.0046 0.29 12.1 0.3 1 23 456 479 456 479 0.91

11 16 0.0048 0.3 12.0 0.5 2 23 488 510 487 510 0.90

12 16 0.0018 0.11 13.4 1.0 2 23 519 541 518 541 0.93

13 16 5.3e-05 0.0033 18.2 3.8 1 23 546 569 546 569 0.94

14 16 7e-05 0.0044 17.8 1.2 2 23 578 600 577 600 0.90

15 16 2.2e-06 0.00014 22.5 0.8 1 23 605 628 605 628 0.97

16 16 1.1e-05 0.00071 20.3 2.4 2 23 637 659 636 659 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	8e-08	5e-06	27.0	1.3	2	23	204	225	203	225	0.98
2	16	0.001	0.064	14.1	0.1	1	23	228	250	228	250	0.98
3	16	1.7e-05	0.001	19.8	0.6	2	23	257	279	257	279	0.94
4	16	0.0015	0.091	13.6	0.5	1	23	285	307	285	307	0.98
5	16	5.4e-06	0.00033	21.3	2.3	1	23	313	335	313	335	0.95
6	16	4.7e-06	0.00029	21.5	5.8	1	23	341	363	341	363	0.99
7	16	0.0031	0.19	12.6	3.1	1	23	369	391	369	391	0.97
8	16	4e-05	0.0025	18.5	3.0	1	23	397	420	397	420	0.95
9	16	6.9e-05	0.0043	17.8	1.8	2	23	429	451	428	451	0.94
10	16	0.0046	0.29	12.1	0.3	1	23	456	479	456	479	0.91
11	16	0.0048	0.3	12.0	0.5	2	23	488	510	487	510	0.90
12	16	0.0018	0.11	13.4	1.0	2	23	519	541	518	541	0.93
13	16	5.3e-05	0.0033	18.2	3.8	1	23	546	569	546	569	0.94
14	16	7e-05	0.0044	17.8	1.2	2	23	578	600	577	600	0.90
15	16	2.2e-06	0.00014	22.5	0.8	1	23	605	628	605	628	0.97
16	16	1.1e-05	0.00071	20.3	2.4	2	23	637	659	636	659	0.91

Sequence Information

Coding Sequence: ATGGCTGAAACATTGAACCCAATATCTTTTTGTAGATGTTGTCACAAGAATGGTGATTTCAAGTGTCTATTTTCCAACTTCATTTACGAGAATGAAATTGAGAATTATTCGCAGATGTTGTACGATACATTCGGAATCTTATTTGTACCCTCCATAGATGACAAAATCTATACAATATGCAACGAGTGTATTGAAAAACTACGTATCTCAACGGAATTCAAGAATTGTGTCCTCGCCTGTAAAAAAAATGCTTGTTGGCGGGGGCACTGCCGCGATCCACTTGACGGGGGCACTGCAGTGACCCCGGATGTGAAACAAAAGACCTCCGAAGATGAAGACAGTGACACGGATATGATAAATAAGGCATTAGAGGAAGAGTTAAATGAAGAGGTGAAAGTGGAAGAGAGCGGAAACAAATCAGACGAAACCTTCATCAAATCTGAAGAATTTACAATCGACATCGAAGTTAAGACAGAAGAGAGTGTCGAAGATGAAGACTCTTGTACAGACAAAGTGTTAGACAAAGATGTCACAATTGAAGAGAGCAGAAAAGAATCGTCGAGTGAATCGGGTGTCAATTTAAGAAACACAAGCGACAAGTATGAGAATAAATGCAATATTTGCAATAAAACTTTTGCACGCAAAGGGAACCTAGAAAATCATCTTAGAAGTCACGAGGGCTATAAATGCCAAATATGTCCAGAAATATTGTCGAATCAGATAGAGTACGATAAACACATGGAAATACACCTGGGTGGAATAACAAACGAGTGCAAAGAGTGCGGTCGAACATTCGCAACCAAGGGAACCTTGCTGAGACATTTTCAAAACGTGCATATGGGTATGAAAAAGTATAGTTGCCAGTATTGCGATACAAGAATGACGTCGAGAGAGCAGTTGGTTGTACACGAAAGGATACACACGGGTGTAAAACCGTATGTGTGCAAAAAATGCAATAAAGCGTTTAGTAGTAAAGAAACTCTTAAGAAGCATAATACTGTGCATTTAGCACTTAAGCCTTACACTTGTAACGTGTGTGATAAGAGGTTCATACGCAAACAATGTTTTAAAAGACACATGTTGACGCATACAGTTATAAAAAGTTTCCAATGCGGTGTCTGTAGCAAGACTTTTAGGCTTAAATATAAACTCAATTGCCACATGGCGGTCCATAATCGCGAAAGACCCTACGAGTGCAACATTTGTAAAAAAAATTATAAATCCAAGAACACCTTACACAAGCATATGTCGGCTGTACATTTGGGCTTTAAGCCAGCGCTCTCTGAATGCGACATTTGCAAAAAGACTTTTAAATCTAAGAGGGAAATACGTCACCACATGTTGGCTGTACATTTGGGCTTTAAATTTGAGTGCGGCATTTGTAAGAAGACATTTAAATATGAGGCGAATATACCCCGCCACACGTCGGTTGTACATTTGGGCATTAAGCCAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGACAATTATACGCAGCCACATGTTGGCTGTACATTTGGCCTTTAAGCAAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGGTGATTTTACGCCAGCACAAGAAGGCTGTACATTCGGACTTTACATTTGAGTGTGACATTTGTAAGAAGACATTTAAATATAAGGCGCATATACGCCACCACATGTCGGCTGTACATTTGGGCTTTAAGCCAACGCCCACTGAGTGTGACATTTGCAAAAAGACTTTTAAATCCAAGGTGACTTTACGCCAGCACAAGACGGCTGTACATTCGGGCTTTACATTTGAGTGCGACATTTGTAAGAAGACATTTAAATCTAAGGCGAATATATATCGCCACATGTCGGTTGTACATTTGGCCTTTAAGCCAACGCTCATTGAATGCGACATTTGTAAGAAGACATTTAAATACAAGTACCATTTAAATCGCCACAAGTCGGCTGTACATTTGGGCTCCCCCAAAAATAGCTCATGA
Protein Sequence: MAETLNPISFCRCCHKNGDFKCLFSNFIYENEIENYSQMLYDTFGILFVPSIDDKIYTICNECIEKLRISTEFKNCVLACKKNACWRGHCRDPLDGGTAVTPDVKQKTSEDEDSDTDMINKALEEELNEEVKVEESGNKSDETFIKSEEFTIDIEVKTEESVEDEDSCTDKVLDKDVTIEESRKESSSESGVNLRNTSDKYENKCNICNKTFARKGNLENHLRSHEGYKCQICPEILSNQIEYDKHMEIHLGGITNECKECGRTFATKGTLLRHFQNVHMGMKKYSCQYCDTRMTSREQLVVHERIHTGVKPYVCKKCNKAFSSKETLKKHNTVHLALKPYTCNVCDKRFIRKQCFKRHMLTHTVIKSFQCGVCSKTFRLKYKLNCHMAVHNRERPYECNICKKNYKSKNTLHKHMSAVHLGFKPALSECDICKKTFKSKREIRHHMLAVHLGFKFECGICKKTFKYEANIPRHTSVVHLGIKPTPTECDICKKTFKSKTIIRSHMLAVHLAFKQTPTECDICKKTFKSKVILRQHKKAVHSDFTFECDICKKTFKYKAHIRHHMSAVHLGFKPTPTECDICKKTFKSKVTLRQHKTAVHSGFTFECDICKKTFKSKANIYRHMSVVHLAFKPTLIECDICKKTFKYKYHLNRHKSAVHLGSPKNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01386035;
90% Identity: -
80% Identity: -