Sand002856.1
Basic Information
- Insect
- Synanthedon andrenaeformis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_936447275.2
- Location
- CAKZFQ020000145.1:445404-460886[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-14 1.5e-11 44.6 0.1 3 44 541 582 539 584 0.95
Sequence Information
- Coding Sequence
- ATGAAAGTGTTTATGGACATGAAGCCCGGCGGGAGCCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCGTCACGCAAGGATCTGAACGTGCAAATGATGATGGAGATAGAGTCTTCGCTTGTGAGCGCAGAAGCAATCCGCACACCTTGCATCTACATAAGGCCGGAGGTAGACAAGGCTACAGCCAATAAGGTCAAAGATATTGTCGTCAACCATCAGGGAGAGATTTGTGAAGACGAAGAAGACGCTACTCACATAATCTACCCGACAGTAGATCCTCTGGAGGAGGAGTATGCGCGGCCCGTGTTCAGGCGAAACAATCACGCGCTCGTGCATTGGTACTATCTGCCAGACAGCCACGACATTTGGACGCAGGCCGACTTGCCGGTTGATGTTCCGGAGACTGTGAGCTGGGAGTGCAACCGGGCGGAGCCTTGGCGCGTGTCGGCCACTTGGGTGCTCGACCTGCCTCAGTACAACGAGTGGATGAACGAGGAGGATTACGAAGTGGACGCCAATGGGAAGAAAAAGGTACATAAGTTACGATTGTCCGTTGACGATCTACTGCCTGGTGCGGAACCCTCGGTGAAGTCAAAGAAGGGGAGCAAACGCAAGCGTTCGCCCTCACCGCCGCCTCAAAAACACGGCAAGAGGAAGAGTCGAATGACTAAACGCCGTGAGAATGACGACGAGGTGGAAGAAGACACAGCGTCGCGCGACAACACTGACGTAGCACCACCACCGCCTCCGGAGGTGGAGCGACCTGCCGACACGGGGGTGAATTCTAGCGGCGAGACGAGCGGGTCTGGTGGAGGAGTAGCGGGGAATAGCGGAGCTGTCGCGACAGCAGCGCCCGTTAGCGCTACGACTGAGGCGCCGGCCACACCCGCGCCCATCGACACGCACGACGACTCGCAGGGCAAACACAGCGACACCAACACGCAGGAGATGTTAATAAAAGAGGAACTAGAGGACAACGTGACGGACCAAACGCACCACATCGTGGTGCCCTCGTACTCCGCGTGGTTCGATTACAACTCCATACATACGATCGAGAAGCGCGCCTTGCCCGAGTTCTTCAATGGCAAAAACAAGTCCAAGACTCCGGAGATCTACCTCGCTTATAGGAATTTCATGATCGACACATATCGCTTGAACCCAACAGAGTATCTGACTAGTACCGCGTCCCGACGTAACCTCGCCGGCGACGTGTGCGCCATCATGCGTGTTCATGGTTTCTTAGAGCAGTGGGGACTCATCAACTATCAGATGGAAGCCGAGTCTCGTCCTACAGCTATGGGCCCTCCGCCCACGTCACATTTCCACGTGTTGTCCGATACGCCATCAGGCTTGCAGCCCTTGGTCGCACGCCCCGCAGCGCAACCCAGGCCAGCCGAGAACGCGGCCGTGCCTAAGGTCGAGGCCGGGTTGCCTAACGGCACGGAGGCGGTGGCGGGCGCGGCGACCGTGAAGCAGGAGCCGGCCGTGGAGCTGGGCACGGCGCCCGGCCTCAAGCTGGACCAGTACCGCGCGGGCGGTGCGGGAGGGGCGGGCGCGGGTCGAGGCCGCGCGTGGACCGAGCAGGAGACTCTTCTGCTGCTCGAGGCGTTGGAGCTGCACCGCGACGACTGGAATCGCGTGGCGGCGCACGTCGGCTCGCGCACCCACGACGAGTGCATCCTGCACTTCCTGCGGCTGCCCATCGAGGACCCCTACTTGGAGGACGGTGCCGCCAATGGTGTTCTGGGTCCGCTGGCGTATCAGCCGGTGCCGTTCAGCAAAGTTGGCAACCCTGTGATGAGCACTGTTGCGTTCCTCGCCTCCGTGGTCGACCCTCGCATAGCGTCCAAAGCCACCAAGGCCGCTATGGACGAGTTTTCTGCCATCAAGGATGAGGTGCCGGGCGCCATGATGGAGGCACACGTTAAGGCGGCAGCGGCCCACGGGCCGGCGGCCGCTCTCGCCGCCACAGGAATCGCTGGCACCGCTCCCGACGTCACTGGTGAGAAAAAGGAGGGTTCCGATGTGAAGGCGGAGCCGATGGAAGTGGAGGAAGGCGAGATGAAGCCGAAAGAAGAGTCCGCAGACTCACCAGCCGCCGAAGACAAGGACACTAAAGACACACCTCCGCCACAACCAGAGAACGGCGGTGCGGTGGACGCGTCGCTGCAGTCGGCGGCGGCGGCGGCGCTGGCGGCGGCGGCAGTGAAGGCGAAACATCTCGCGGGCGTGGAGGAGCGCAAGATCAAGTCGCTGGTGGCGCTGCTCGTCGAGACGCAGATGAAGAAACTCGAGATCAAGCTGAGACACTTCGAGGAGCTCGAGGCCACCATGGAGCGCGAGAGAGAAGGCTTGGAGTACCAGCGGCAGCAGTTGATCCAGGAGAGACAGCAGTTCCACTTGGAGCAGCTGAAGGCAGCCGAGTTCAGGGCGCGACACCAGGCGCAGCACAGAATGCAACAGGAGGGAGCGAGCGGTGCTGTTGGCGGGGAGCAGCCTTCTGGAGAGGCGGCGACGTCCCAGGCGGTGCCCCCCGCCGGCCCCCCTCCCCATGCCTCCGGCCCCCCAACGCACGCAGCCCACGCGCCCCCCCAACACGCGTAG
- Protein Sequence
- MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLVSAEAIRTPCIYIRPEVDKATANKVKDIVVNHQGEICEDEEDATHIIYPTVDPLEEEYARPVFRRNNHALVHWYYLPDSHDIWTQADLPVDVPETVSWECNRAEPWRVSATWVLDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVDDLLPGAEPSVKSKKGSKRKRSPSPPPQKHGKRKSRMTKRRENDDEVEEDTASRDNTDVAPPPPPEVERPADTGVNSSGETSGSGGGVAGNSGAVATAAPVSATTEAPATPAPIDTHDDSQGKHSDTNTQEMLIKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQMEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVARPAAQPRPAENAAVPKVEAGLPNGTEAVAGAATVKQEPAVELGTAPGLKLDQYRAGGAGGAGAGRGRAWTEQETLLLLEALELHRDDWNRVAAHVGSRTHDECILHFLRLPIEDPYLEDGAANGVLGPLAYQPVPFSKVGNPVMSTVAFLASVVDPRIASKATKAAMDEFSAIKDEVPGAMMEAHVKAAAAHGPAAALAATGIAGTAPDVTGEKKEGSDVKAEPMEVEEGEMKPKEESADSPAAEDKDTKDTPPPQPENGGAVDASLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAQHRMQQEGASGAVGGEQPSGEAATSQAVPPAGPPPHASGPPTHAAHAPPQHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01386657; iTF_01387548; iTF_01388415; iTF_01341231;
- 90% Identity
- iTF_01386657; iTF_01387548; iTF_01388415;
- 80% Identity
- -