Basic Information

Insect: Synanthedon andrenaeformis
Gene Symbol: clz9_7
Assembly: GCA_936447275.2
Location: CAKZFQ020000377.1:38612-40552[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-07 2.6e-05 24.2 0.0 1 36 8 43 8 49 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-07	2.6e-05	24.2	0.0	1	36	8	43	8	49	0.88

Sequence Information

Coding Sequence: ATGGCGCCGAAGAAAAACTATACGCCGGAGCAAATGGGTCGTGCTTTAAATGCAGTTCGGAGGGGTGATCCATTAGCAACTGCTGCAAAAAAGTATGGGGTGCCCCGAATAACTTTAAGAAATAAGGTTACAGGCAAAAGTCCCGCAGTGTGTTCTATGGGACCCCCCACCGTGCTAAGCGATAGAGAAGAGATGATGTTAGTAAAGTGGATCATTGCAATGTCGGAAAGGCACTGTCCTCTGGGAAAAGATCAGCTTCTTGACAGTGTCCAAAAAATCATTAACTTAGATCAGAGACCTACGCCATTTACCGAAAATCGTCCTGGTAAGAAATGGTTCAAAGCTTTTCTTCATCGAAATCCTGAATTGGCATTAAGAGTAACTCAAAACCTAACAAAATCGAGAGATAATGTTACAGAAAGGCAAATAAGGGCCTGGTATTCGGATCttgaaacatattttgagaagcataatctggcagaggtattaaaagacccaaaacgagtatttaataccgacgagagtgccttttttctaaatcccaaagagaaCttaacagttctcgtaacggcaaatgctgctggtcagctcccaccaccaatgatagttttcacatacgaacgtgtgccgggatacatatccaatagcgttcccgaacactggggtataggtaggtctgaatctggttggatgtgtggaagcacattttttgaatatatgaccaacatatttcatccttggttaacggagagtggcataaaattgccaataatattttttttagatggtcatgcttctcatctcactttgcacttagcagaattttgtgcaaataatcaaatagagttgactgcactttatcctaacagcactcatttactgcagccgatggacattgctgtgttccgacctttgaaagttttttatcgtaaaaacataaataaatggaagaccgtaaaccaaagtcaagaggtaaagaaagaaaacttcggaccaatccttgaagctagtcttaaagaaatttcgacggactgcataaaaaatgggttcagggccagtggtctacagccctttgaccctgattatgtagacttttcaaagttaaataaaaaaaataggacagaaaataatcgagAGACATCTAGCAGTGTTTCAACGACTGGGGACAACGATTTCTTAAAAAAGCTTGAGGCAGAAGTAGTGAATATTTACAGTTCCCAGAAACTTAATTTGTTCAAAGATTGTTTTTATAAAGACAGAGAAAATTTACAAGACAAGTTGCCTAACGAGGACCTCTCACTATATATTTTATGGGCAAAATATAAGCACAAATGTCAAATAGCAGGACACGCAGCCGAAGTTGATGAAAGTACTGAAAACATACTATTAGAACATCCGTCAAACGCGTCTCCTTCAAATTCAGCTGTTAGCGCATTGTCATCTATCAATAAAAAATCTGAAATCACGATTGATCATAGCACACAAAATAACAATGATATTTTAACGCCGCCAGTGATTGATCAACCCTCAAGTTCACAGAATAAATTAAGCTTAAGAGATGACAATTTAGATCCTATTCCGCCTCCACCTCAAAAACAGTTAAACCTGGAAAATGATAAAGACTTAGCAAGCTGTGATTATTCAACTCCCGTCAAAAATATCTCTTCTTCATCTTTTGCCAATCATATGCTTAATACCAGTCAGATGCAGGTGCCTAGTCCGTTCAAGAAAGCGCTTTTTTGGCCTAAACCTGAAAAGAAAAAACGAAGAGTAACGAAAGAAAAGATACCAACAGTAATTACAAGTAAGGCATGGCGAGAATACAACGAAAAGAAACTATTAGAGAAAAAGGAAAAGGAGAATGAAAAAGAAAACAGAAAATTGGAACGGGAAGAAAAGAAACGGTTAAAAGAAATGGACATGAATAATAAAAAGAAATAA
Protein Sequence: MAPKKNYTPEQMGRALNAVRRGDPLATAAKKYGVPRITLRNKVTGKSPAVCSMGPPTVLSDREEMMLVKWIIAMSERHCPLGKDQLLDSVQKIINLDQRPTPFTENRPGKKWFKAFLHRNPELALRVTQNLTKSRDNVTERQIRAWYSDLETYFEKHNLAEVLKDPKRVFNTDESAFFLNPKENLTVLVTANAAGQLPPPMIVFTYERVPGYISNSVPEHWGIGRSESGWMCGSTFFEYMTNIFHPWLTESGIKLPIIFFLDGHASHLTLHLAEFCANNQIELTALYPNSTHLLQPMDIAVFRPLKVFYRKNINKWKTVNQSQEVKKENFGPILEASLKEISTDCIKNGFRASGLQPFDPDYVDFSKLNKKNRTENNRETSSSVSTTGDNDFLKKLEAEVVNIYSSQKLNLFKDCFYKDRENLQDKLPNEDLSLYILWAKYKHKCQIAGHAAEVDESTENILLEHPSNASPSNSAVSALSSINKKSEITIDHSTQNNNDILTPPVIDQPSSSQNKLSLRDDNLDPIPPPPQKQLNLENDKDLASCDYSTPVKNISSSSFANHMLNTSQMQVPSPFKKALFWPKPEKKKRRVTKEKIPTVITSKAWREYNEKKLLEKKEKENEKENRKLEREEKKRLKEMDMNNKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -