Sand010371.1
Basic Information
- Insect
- Synanthedon andrenaeformis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_936447275.2
- Location
- CAKZFQ020000603.1:7322-26836[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-14 3.3e-12 46.3 0.0 1 38 241 279 241 285 0.93 2 2 4.6e-18 1.2e-15 57.3 0.0 1 43 453 496 453 498 0.95
Sequence Information
- Coding Sequence
- ATGGGAGCAGCTGTTCTCCGTAGTGTTGAGACGAATCCAGTTTTCATTGTTGAAGGGCGAGGTCGTGGGGATGTTATGACACGACTTCGGTACCCCGCCACGGCTATCCAGCGCGGGGAAGCCTACGCTCCCTGTCAGGACCTCGGCGTACCCGAAAGTGGAGGTACGCCAGCCATCTCAGGGGACCTTACGACGGGCGGCAGTCTCCCCCAAGACCACCGCCCGGGTGCCGGGCCCTTATTCACTTTTATTGATATGAATTTTAACAATAAACTTTGTTTTCAGAGTCCTGCGTCGGAATCAGACAGCAGTTCAGTGTCGGGCGCAAAAAGTCCAGCTGGTGCACCGAACTTGCTCCAGCATTTATTACAAGTGCAATTGCAAGCACAGACACCACAGGGCATAGCACAGTTTCAGCAGATGTTAGCTGCGTTGACAGCTCTCAGTACGGGGCTGGTGTCTCCGGCCCTCACACCTGCTTTCCTCATGCAGAGGTTGGTGCAAACGAGACACCTTGATAGGTTACCGACGGATGTCGGAGATAAGGTGACCGCACCCAACTCGTCGCCAACACTCACCGAACAGCCCCTGGACCTAAGCGCCAAGTCTACTTCCAGTACTAGTGGCACTCCGCCTCCCGACGCCAAGACCCTTGACAATGCTAGATTGAAACGCTCTGCTTTAGAGGGTGCAGGCAACAGCGCGACCAAGCGAGCGTATACTGACGACGAACTGTCAGCTGCCATCAGAGACATACAATCGGGAAGACTTGGCACCCGTAGGGCCGCTGTTGTCTATGGCATCCCACGATCGACGCTACGAAACAAAGTCAACAAATTCGGTCATAGCTCTGAACTTGGACACGATTCTGAACCTGACAGCGAACCGGAACGGACCGAATCACCGCCATCCGTAATATTAAAAATTCCCACCTTTCCACCACCGGACGACAAGAGTCCCTCGCCAGCTAGTACTGGAACTACACCCGTCACACCAATAACACCTATTATTCCACCTTCACAGCCACCTCTAAGTGCGCCCTCCCAGTTACTCTTACCACCTTCAGTCTTCGTCGATCCGCCGTCGACTCAACATCTATTCACCTCCTTAAGTGACGTCATAGCTAAAAGTATAAGCCAGAAGTTCCAACAACCGCTAGACAGACCACAACAACACAGCGACTTGTCTTTCATGAGAGCACCAGATAGACACGTGTCCGTAATAAAAACTCCGCCAGATAATCAGAGAAACTTTCCCACACCGAGTAATTCCAGGGCAGCGACAGCGAATAACAACGGTCAACCCGCTGCAGGTGGTAAAGGTACGAGACCCAAGCGAGGAAAATACAGGAACTACGATCGAGACAGTCTAGTAGAAGCGGTGAAGGCGGTTCAAAGAGGTGAAATGTCAGTTCACAGAGCCGGTTCTTATTATGGAGTACCTCATTCAACGCTCGAATATAAAGTTAAGGAAAGGCATTTGATGAGACCGAGGAAAAGGGAACCAAAACCACCACAGGATGCAAAACCGCAGCCACCGAAGCCGCCGCAACCTAACAAGCCGTCGAAACCTTTTTCGAATGGACTCAACGGACCCGAAACGTCGGGATATCCACCAAGCTACCCTTTCTGGCCCGGCGCTGGTTTTGCCCATCCACCGGCCCCTGACTTATATGCATCCCAAATGATGCGCAGGCTACGCGAAGATGCACCACCGCCTGCTAATGGCTCGTTTCTTGAGGGCATCATAAGATCGAGTCTCGAGCGACCCGGCGCTGCGTTATTACAACGATTAACTGCGGAACCTCGGCCACCTATGACACCAACTCCGGATGCGCCAAGTCTACTGCGACGACTTGCCGGTGAGCCCTCAGCTGAAGACTCACCACCGGCAAGGCGCCCTCGTATGGATAGCTCTGACTTAACCGATCGCACCGATAGTTTCCGCCTAGCTGCGGAGATGAGAGAAGCAGTACAAAAACTGCGAGCGGATAAAATGAGGCCCAGGAACGGGACACCGACGCCTCCTGGAGCTCTTTCCCCGCCGCCTGCACCGCCAGCCGCACCCCCTGACCGCGCCTAG
- Protein Sequence
- MGAAVLRSVETNPVFIVEGRGRGDVMTRLRYPATAIQRGEAYAPCQDLGVPESGGTPAISGDLTTGGSLPQDHRPGAGPLFTFIDMNFNNKLCFQSPASESDSSSVSGAKSPAGAPNLLQHLLQVQLQAQTPQGIAQFQQMLAALTALSTGLVSPALTPAFLMQRLVQTRHLDRLPTDVGDKVTAPNSSPTLTEQPLDLSAKSTSSTSGTPPPDAKTLDNARLKRSALEGAGNSATKRAYTDDELSAAIRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGHSSELGHDSEPDSEPERTESPPSVILKIPTFPPPDDKSPSPASTGTTPVTPITPIIPPSQPPLSAPSQLLLPPSVFVDPPSTQHLFTSLSDVIAKSISQKFQQPLDRPQQHSDLSFMRAPDRHVSVIKTPPDNQRNFPTPSNSRAATANNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAKPQPPKPPQPNKPSKPFSNGLNGPETSGYPPSYPFWPGAGFAHPPAPDLYASQMMRRLREDAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRPPMTPTPDAPSLLRRLAGEPSAEDSPPARRPRMDSSDLTDRTDSFRLAAEMREAVQKLRADKMRPRNGTPTPPGALSPPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341060;
- 90% Identity
- iTF_01341060;
- 80% Identity
- -