Basic Information

Insect: Sympetrum striolatum
Gene Symbol: ush
Assembly: GCA_947579665.1
Location: OX388342.1:46497837-46510213[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.018 6.2 10.1 0.0 1 20 162 181 162 183 0.89

2 8 0.00013 0.045 16.8 2.1 1 23 379 401 379 401 0.98

3 8 0.051 18 8.7 1.0 2 20 497 515 497 517 0.93

4 8 1.4 5e+02 4.1 3.4 2 21 975 994 974 995 0.89

5 8 0.047 16 8.8 0.0 1 21 1071 1091 1071 1092 0.93

6 8 0.051 18 8.7 0.9 1 23 1190 1212 1190 1212 0.98

7 8 0.0019 0.65 13.2 0.8 1 23 1286 1309 1286 1309 0.95

8 8 0.074 26 8.2 0.8 2 21 1517 1536 1516 1537 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.018	6.2	10.1	0.0	1	20	162	181	162	183	0.89
2	8	0.00013	0.045	16.8	2.1	1	23	379	401	379	401	0.98
3	8	0.051	18	8.7	1.0	2	20	497	515	497	517	0.93
4	8	1.4	5e+02	4.1	3.4	2	21	975	994	974	995	0.89
5	8	0.047	16	8.8	0.0	1	21	1071	1091	1071	1092	0.93
6	8	0.051	18	8.7	0.9	1	23	1190	1212	1190	1212	0.98
7	8	0.0019	0.65	13.2	0.8	1	23	1286	1309	1286	1309	0.95
8	8	0.074	26	8.2	0.8	2	21	1517	1536	1516	1537	0.93

Sequence Information

Coding Sequence: ATGGAAAGCGGAGGGTTGGAAAGAAGTCTAGAGGGTTTTGGCGGATTCCGCGTGGGTGGATGTGGACAAGAGGGGAGGCGCGTGGCCGAGAGCAGCAGCGTCCCCAGAGGCTCTCCGAACAGTGCCTCCGTCATCTCTTCACCCCCGTCGCAGGCCCCTCGCGTGCGACTCAACCCCAGCCTCGCAACGGATCCTGCTATCAGAGGTCCATTGCCACTCAACGCACACATCCCACTCACGGACTTCGAGTACATGCTGCCCCCGGGACTGCAAGCCTCGACCGCGGCTGCTGCCGCCGCAGCTGCATTCGCTGCGGCTGGTCGCTTCTTCTTCCCGCCGCCCCCGCACCCAGCGACGCCGAGGGTTCCTGCAACCACTCCTCCACATCCGATACAGACTCCGGTCGCAGAAGCAGCCCCCGCTTTGGTGACGAGGACTGTGAACATTCAGTCAGAGGGACTAGAAGTCAGACAGGTCCCCGTGTTCATTTGCGCGCCGTGTGGCATCAAGTTTAGCAGCGCCAGTACCCTCGAAGCCCACCAAACGTACTACTGCTCTCACCGCAACAGCGTTCTGAGCGGCGCCGTGGTGCCGGGAGGTGCGGCGGCCGTGCACCCAGGACATTCCCCAGCGGCGCCTGCGCCCGCCGGCACCCCTGGCCCTCCGACCACCCCCTCATCACGCCCTCCCCCTTCCCCTTCCTCCTCCTCATCGTCCTCCTCGCACGCAACAATGGCACAGACAGACGCCCAGCAGATAAGATCCGTGCCAACGCCCTCTGGACCCATCAGGGGTAAGCAGCTACTTCTCCTTGCGGATATTTCTTTCTCGGGCGAGAAAACAAAGTGCCAGCCATCCTTTTTCGCTTTCTTTTGTTTCTGCTGCCGCGTGGGCAGTGAAGAGCTTAAGGTCGGTGAAAACCTTTCAGCCCACGGAAGGGTTGTCGTAAATGCCGGGCGGAATCACTGTCATCGCGGATTTTATTTCCGCCTCGATCAACTCCAAGGTCGTGGATGCAGCGAGTCCGAAGACGGCCGCCCATTCTCTGCAGACGTACCCGAGGACCGCCGCTCTCCATCCTCGCTCCCCGAAGAAGGTTGTCTGCCAGCCAAAATTGCGAGGACCAGTCGCCCCTTCTCATGCCCTCACTGTTCCTACTCGGCCGACAAGAAGGTCAGCCTCAATCGTCACATGAGGATGCACGGTGGTGCAGTCGCCATGTCCTCTTCATCTTCTTCATCTCCTTCGCCCTCCTCCTCCACACCTCCTCCTCTTCCACCGGTACCTTCCCAGCCCCCACCTCCATCTCCGGCAAGCGGGGGCGTTGCGACTCAGCTCCACCACCTCCTCCAGCAGGGAATCGTGGTTGTTGCTGGCGGGGGCGCCGGAAGCGTCGGTCCTCGCGGTCCCGACACTCCCCCAGCTGCCTCTTCCTCGCCCCCGGACACCTCATTGCCTCCTCCACCACCTCCCCTCGCGATGGATCGTTACTGTCAGGATTGCGACATTCGTTTCTCCTCCGTTAAGACGTTCCGAGCCCACAAGCTGCACTACTGCAGCACGAGGCACTCGGGGAAGGTGCCTGGTCCTGGAAGTGAGGGGTCGACGTCACCGGCAGTAGTGCCTGGTGTTGGCACCACCACCGAAGAAAGGAGGCTGTCGGTTGGAGAAGCGGGAGATCTCAGGAGTCCGGGGGTAGCTGCCGCGTCTTCGGCCGCCTCGCCTTCCAACCACCTTCCGCAAGTAAAACAGCACCTCTTGCAGCCTCCTTTCGTCGCATTACCCACCAATCCGGTGCTTCTCGTCCCTTACGCCTTCCTACAAAGCGCTAGTCTGGTGGTGGCAGGGACGCCGACACCGAAAGGCGCTTGCATATTGCTCCCCGATGGTTCCCTTAGGCCAGTGTCTCCTCCTCTTGGCGCTGTACCGCCGGCGCCGTCACCCGTCAGGCGGAGAACGCCACCTGCTGCTGATGCGGTGGCCGTGCATGATAGAGGACCCACGCAAATCTCCGTTGCGCCTCAGGTTACGGTGAAGCCAAAGGAAGAACATTCTCAGGCCTCCAAGCCACCACCTGGATCAAGTCCGGTGCCTCTCGACCTTAGCTTCCGCCGCGACTCCTGTGAATCTCAGCTATCCAAAACGGTGTCAATACAGTCAGTGCCGAGTGCCCGAAGGCCATTCAGCAAGCAGTCTCCGAGAGAGGTAGATGGAGGTTGGGAAGATGTAATGAGCACATCCCAGGGACGGAGATCGTCAGAGCCAGGGTCCAGAGGATCCTGCCAGACTTCACCACCACCTTCTCAGCAATCTAACACCCCTACCACCGCCACTCCCATTGACCACGCCCATTCTCCAACATCCTCCACTTCATCTTCAGCTGCCTCCTCTTCCCCTCCTTCCCCAGCAATAGGGCCCAAGGCTAGACCCTCCAGGCCCAATGGGATGTCTTCTTCCTCTTCCAAGAGTGGTGGTGGAGGGCAAGTCCCTCCCCATCCACCTCATCCCATGTTTTCTGCAACACCCCCTACTCTACCGCCACATATCCAACAGCAGATTCAGCAGCTTCAGCAATTTGGGGGTGCAGCAGGAATGGAAAGCCTCGGAATGGCTAACTTCCTTCTGGCTGCTTGCGCTGCTGCTGCAGCTGCCACAGCAGGAGGTCCGGATGGAATGGCAAAAGCCGCTGCTGCTGCAGTAGCAGGTGCAGGAAATGCTGCAACCCAGGGAAGCCTTCCTTTCCTGCTGACACCGGAGCTTGCTTTGAGGATGGTCATGGGAAGTGCAGCATTACCAGAAGGACTGATGCCTAGAGTTCCACCCCACCTTCCTCCCCCTCAACCACCCATTCCTACTCAACAGGGCCCTCCACCCCCTCCCTCTTCCACTGGACCTCAAGTACTTGTCAAACAGGGCGTCTCTAAGTGCATAGAATGTAACATAGTCTTCTGTCGCCATGAGAACTTCCTTGCCCACAAGAAGCACTATTGTGCTGCAAGACTTGTGGAAGGTGCAGAAGATTCACCTGCAGCCAATGTTCAAGGGAACACAGGTTCAGTTCCAAACTCCGGGGCAGAGCTTGTGGAACACACTACTCCTGAGCCATCATCATCAGCTTCTCCCAGAGTGGTACCAACTTCACCATCACTACAGCAGCAGGCAGCACCACCTTCTGGCATTGTCCCTCCTCCTCCAAAGACCTTGCTTCAGTTTATCTGTGTTGCTTGTGGGATTAAATTTACCGCCTTTGACAATCTTCAAGCCCACCAGATGTACTACTGTCCAAAGAGAGATCAAGTAGCAAGTGTACAAAAAAATCCATTGGCAGGAGATGTACCAACCATGGAAAGAACAATCAGAAAATGCCCTAAGTGTAAGACTTCAGTAACTGAGGAAGCCCTTCTTTCTGGTCGGCATCAATGTCCTGCTACCAATGGCTCATCCCCAGCTTTCCCTGTAGTCACAGCTGCAGGAGGCTGGAAGTGCCCATGCTGCGATGTCCTAAGCCCTACAGCCATCGCAGCCCAAAGGCACGTAGAAACTCATGCAGGTGGTGCTGTTAGAGCCTTTCGCTGTACCATCTGTCGTTACCGAGGCAATACTCTCAGAGGGATGAGAACTCACATACGCGCCCATTTTGAGCAGAGGAACAGGGAAACTTCCATAACACCACATTCACCAGAGCTGCAGGAGGAGAATTTCATTGCTTGCATTCTTGAAGATGACTCAGAAGTACCTCCTATGGTACCTGTCAGTATAAGTATCCCAACATCCATCACCACTTCAAGGTCTACTACTCCTGCTGCTGACTCTGACGATGGTAGGATGGAGACAGGATCTGGGGGAGAAAAGATGCACTACTGCGAGGTGTGCGGATACTCTTCTACCTATAAAGGAAACGTGGTGAGGCATCTAAAACTTGTACACAAGTGCACCCAACCAGGAGGTCCTACTGAGGCTGGAGTAATGGGCCCAGGAATAACCTACGTTGCTGGAAGTGGGAATTCATCTTCTGTTCATTCAGCACATTCACCTGGAGGGACTCCTTCGCCCTCTGCAGATTCAATGGTCAATGGGTACGGTGGTACAGGTGGTCACAGAACGGAAGATGAAGAAGAGGACATGGAAGTGAGAGCAGAATCATTGGTAAAAGTGGAGATTATGGAGGTAGACGAAGATGAGAATGAGGATGGAATAGGAAAGAGAGAAGTAAAACTTGAAGGAAGTGAAGCTGAGGAAGAGAGGAAGAGTAATTTTGATAGAGAGGAGGGGAATTCCCATGATTCTTTTAGAGGTGAAAGGGCATCTCCTAGGATCATAAAGAGAGAGGCAGTGTCTTCGTGTGAAGAGGGAAGTATGGGAGGGGACTGCTCTAAGACTGGTCCTCCTTCAGTTGAGCCCGAGGTCAAGAAGGAGGTAGAAGAAGTTGAGGAAGAAGATGAAGGGAAAATTGATGATAGGGAGAGAGTTGATGGGGGAGATGAAGGTAGAAAGTCAGCAGACCCCCCACAGTCACAGCAACAGCAACCTGTGATAAAGAAGGCTAAGTACTGCAAGTCTTGTGATATATCCTTCAACTATCTCTCAACATTCATAGCTCATAAGAAGTTTTACTGTTCGAGTCATCATCCTCCAGCGCAAGGGACAACAAGCCCAGCACCAGCTATTTCGAGAGTTGAGAGAAGTAACCATGGTGCTTCTGGTAATGGCAGGGCAGAAGCAGCAACGCCAGTGCAGTGA
Protein Sequence: MESGGLERSLEGFGGFRVGGCGQEGRRVAESSSVPRGSPNSASVISSPPSQAPRVRLNPSLATDPAIRGPLPLNAHIPLTDFEYMLPPGLQASTAAAAAAAAFAAAGRFFFPPPPHPATPRVPATTPPHPIQTPVAEAAPALVTRTVNIQSEGLEVRQVPVFICAPCGIKFSSASTLEAHQTYYCSHRNSVLSGAVVPGGAAAVHPGHSPAAPAPAGTPGPPTTPSSRPPPSPSSSSSSSSHATMAQTDAQQIRSVPTPSGPIRGKQLLLLADISFSGEKTKCQPSFFAFFCFCCRVGSEELKVGENLSAHGRVVVNAGRNHCHRGFYFRLDQLQGRGCSESEDGRPFSADVPEDRRSPSSLPEEGCLPAKIARTSRPFSCPHCSYSADKKVSLNRHMRMHGGAVAMSSSSSSSPSPSSSTPPPLPPVPSQPPPPSPASGGVATQLHHLLQQGIVVVAGGGAGSVGPRGPDTPPAASSSPPDTSLPPPPPPLAMDRYCQDCDIRFSSVKTFRAHKLHYCSTRHSGKVPGPGSEGSTSPAVVPGVGTTTEERRLSVGEAGDLRSPGVAAASSAASPSNHLPQVKQHLLQPPFVALPTNPVLLVPYAFLQSASLVVAGTPTPKGACILLPDGSLRPVSPPLGAVPPAPSPVRRRTPPAADAVAVHDRGPTQISVAPQVTVKPKEEHSQASKPPPGSSPVPLDLSFRRDSCESQLSKTVSIQSVPSARRPFSKQSPREVDGGWEDVMSTSQGRRSSEPGSRGSCQTSPPPSQQSNTPTTATPIDHAHSPTSSTSSSAASSSPPSPAIGPKARPSRPNGMSSSSSKSGGGGQVPPHPPHPMFSATPPTLPPHIQQQIQQLQQFGGAAGMESLGMANFLLAACAAAAAATAGGPDGMAKAAAAAVAGAGNAATQGSLPFLLTPELALRMVMGSAALPEGLMPRVPPHLPPPQPPIPTQQGPPPPPSSTGPQVLVKQGVSKCIECNIVFCRHENFLAHKKHYCAARLVEGAEDSPAANVQGNTGSVPNSGAELVEHTTPEPSSSASPRVVPTSPSLQQQAAPPSGIVPPPPKTLLQFICVACGIKFTAFDNLQAHQMYYCPKRDQVASVQKNPLAGDVPTMERTIRKCPKCKTSVTEEALLSGRHQCPATNGSSPAFPVVTAAGGWKCPCCDVLSPTAIAAQRHVETHAGGAVRAFRCTICRYRGNTLRGMRTHIRAHFEQRNRETSITPHSPELQEENFIACILEDDSEVPPMVPVSISIPTSITTSRSTTPAADSDDGRMETGSGGEKMHYCEVCGYSSTYKGNVVRHLKLVHKCTQPGGPTEAGVMGPGITYVAGSGNSSSVHSAHSPGGTPSPSADSMVNGYGGTGGHRTEDEEEDMEVRAESLVKVEIMEVDEDENEDGIGKREVKLEGSEAEEERKSNFDREEGNSHDSFRGERASPRIIKREAVSSCEEGSMGGDCSKTGPPSVEPEVKKEVEEVEEEDEGKIDDRERVDGGDEGRKSADPPQSQQQQPVIKKAKYCKSCDISFNYLSTFIAHKKFYCSSHHPPAQGTTSPAPAISRVERSNHGASGNGRAEAATPVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01131836;
90% Identity: iTF_01131836;
80% Identity: -