Basic Information

Insect: Sympetrum striolatum
Gene Symbol: -
Assembly: GCA_947579665.1
Location: CANPUZ010000038.1:9195044-9207827[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2e-05 0.0068 19.4 0.5 1 23 321 343 321 343 0.98

2 8 0.26 91 6.4 1.4 1 11 349 359 349 362 0.93

3 8 2.5 8.9e+02 3.3 0.1 13 23 366 376 363 376 0.88

4 8 8.5e-08 3e-05 26.9 2.2 1 23 382 404 382 404 0.99

5 8 0.046 16 8.8 2.5 1 14 410 423 410 427 0.89

6 8 0.0048 1.7 11.9 0.5 1 23 518 540 518 540 0.97

7 8 0.36 1.3e+02 6.0 5.9 1 23 546 569 546 569 0.77

8 8 6e-05 0.021 17.9 1.9 1 23 575 597 575 597 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2e-05	0.0068	19.4	0.5	1	23	321	343	321	343	0.98
2	8	0.26	91	6.4	1.4	1	11	349	359	349	362	0.93
3	8	2.5	8.9e+02	3.3	0.1	13	23	366	376	363	376	0.88
4	8	8.5e-08	3e-05	26.9	2.2	1	23	382	404	382	404	0.99
5	8	0.046	16	8.8	2.5	1	14	410	423	410	427	0.89
6	8	0.0048	1.7	11.9	0.5	1	23	518	540	518	540	0.97
7	8	0.36	1.3e+02	6.0	5.9	1	23	546	569	546	569	0.77
8	8	6e-05	0.021	17.9	1.9	1	23	575	597	575	597	0.96

Sequence Information

Coding Sequence: ATGAGCGACATAACTTCAGATCTTTGTAGGCTTTGCTTGAAGGAAAGTTTCACGCTACATGATATCTACTCCAGCCATACTACAACAGGGGATCTGATTTACCGTGTTATGAATTACGTTTATGACTTAGAAGTAAACCCCGACGACGGTCTTTTAACTCAAATATGTGCTCCGTGCATGTGGAAGATGCTCGAATTCGAAGGGTACAAGAGGAATGTTCATTATGCGAGAGTAGAAATTGTAAAATTGTTGAGCAAATTAAGTCACGCTTCCACCGAAGGTTGTGACAGTGATGAAAGGCCAATTGAATCAGATTCTGCACAAGAGGTAGGTTGTGACAGCCATGAGAGTAATGAAGGGACTATTGAAGCTGATTCTGCACAAGGGCTTTCTATGGAAGATTTAAGCAATAGAGAGAATGATGACAGCTCCATAGAATCGGATTCTGCACATTCGGTTCCAGCTAATGATGATATTGATATTGAAGAGTGGCAGATGCCTAAAGAGTTAAAAAGAGAGGATATCGATACTGAGGGACTAGGAATGGAACCAGATTTGCATATTGACGAGAACATTATGAATATTGATAATGGGTTACGTTCCTCGAAAGTGGTGTTACAAGGGCTGGACTTAGCGGTGAAGCAAGAGGAGAGTCAGCAGATTAATGATGAAGTTGGTGCAATTCAGTCCACTGTGTCATCAGATTCAAGGAATCATTTCAGTTTGGATACTTCAGAAGAAACTGTTGGAAATTTATTTGAGGGAGAGAGCATTTGCACTAAAGAAGATAACTCTTTTGTAATCAGAGAGGCCAATGAAGGGATAACTGAGGAAGTCTCAAGAGATGAAGTTGTACCAGAAGAGGAAACAACATCTGTGGAGCTGTCAGAAAGTATTCTGAATGATACAGAATTAGAATTGTCTCATTTAAAAGCCCCTCTTTCTAAGAGAAAGAGTGTGTTTATTTGTGATTTTTGTGAAAAGAGTTTTGCTAAGAAACGTGATTTAGGCAACCATATTAGGATTCACAGCAATGAAAGACCCTTTAGTTGTAATGTATGTAAAAAAACATTTAAGTGGGATTATGCAAGGGGTAATGCTGATCTCAGCAGGCACATAAGAATTCATACCAAGGAGAAGCTGTTTAAATGCAAAGTGTGCACAAAATCTTATACTCAAAAGGGTGATCTCAACAGACATATGCTTACTCACTCTTCAGAGAAATCATTTTCATGTGATACTTGTGATAAGAGATTCAAGACTAAACAAGATAAGAAAACCCCTGGGTCTTCAGATTTAATGCTTATTTTAAGTTTGGAGGCTTCAGAAGAATCTGCCGGGAGTTTATATGAGGGAGAGAGCGTTTGCCTTACTCAAGGTAACTCCGTTCAGATGAGAGACACCAATAAGGGGATACATGAGGAAGATTTAAGAGATGATATTGTACCAGAAGAGGAATCACTATCTTCTGAGATGTCAAAGAGTGTTCTGGATGTTAGAAAATCAGGAAGGTCTCACTTAGATGCCCCTTGTTCTAAGAGGAAGAGTGGGTTCATTTGTGATTTATGTAAAAACAGTTTTGAAGAAAAGCGGAATTTGGGCTACCATGTTAGGGTCCATTATGATGAAAGACATTTTAGCTGTAATAAATGTGATAAAACCTTTAAGTTCTACAATGGTCATCTGGATACCCATTTGCTTTCTCATTCTTCAGAGAGGCTACATGTCTGTGATATTTGTGATAAGAGATTCAAGAGTAAGGGAGATAAGACTAGACATGCATTAAGTCATTTGAGAAAAAAATAA
Protein Sequence: MSDITSDLCRLCLKESFTLHDIYSSHTTTGDLIYRVMNYVYDLEVNPDDGLLTQICAPCMWKMLEFEGYKRNVHYARVEIVKLLSKLSHASTEGCDSDERPIESDSAQEVGCDSHESNEGTIEADSAQGLSMEDLSNRENDDSSIESDSAHSVPANDDIDIEEWQMPKELKREDIDTEGLGMEPDLHIDENIMNIDNGLRSSKVVLQGLDLAVKQEESQQINDEVGAIQSTVSSDSRNHFSLDTSEETVGNLFEGESICTKEDNSFVIREANEGITEEVSRDEVVPEEETTSVELSESILNDTELELSHLKAPLSKRKSVFICDFCEKSFAKKRDLGNHIRIHSNERPFSCNVCKKTFKWDYARGNADLSRHIRIHTKEKLFKCKVCTKSYTQKGDLNRHMLTHSSEKSFSCDTCDKRFKTKQDKKTPGSSDLMLILSLEASEESAGSLYEGESVCLTQGNSVQMRDTNKGIHEEDLRDDIVPEEESLSSEMSKSVLDVRKSGRSHLDAPCSKRKSGFICDLCKNSFEEKRNLGYHVRVHYDERHFSCNKCDKTFKFYNGHLDTHLLSHSSERLHVCDICDKRFKSKGDKTRHALSHLRKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -