Basic Information

Insect: Sympetrum striolatum
Gene Symbol: RREB1
Assembly: GCA_947579665.1
Location: OX388344.1:26489574-26498911[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0022 0.78 12.9 0.3 1 23 101 123 101 123 0.99

2 14 1.2e-05 0.0041 20.1 0.2 1 23 141 163 141 163 0.98

3 14 1.1e-06 0.0004 23.3 2.6 1 23 169 191 169 191 0.99

4 14 0.012 4.4 10.6 1.5 2 23 240 262 239 262 0.92

5 14 0.022 7.6 9.8 0.1 1 23 498 520 498 520 0.97

6 14 1.1 3.9e+02 4.4 3.7 1 23 534 555 534 555 0.96

7 14 0.017 6.1 10.1 3.6 1 23 561 584 561 584 0.97

8 14 0.026 9.2 9.6 4.9 1 23 1018 1041 1018 1041 0.95

9 14 0.0011 0.37 14.0 0.4 2 23 1371 1392 1370 1392 0.97

10 14 0.19 68 6.8 5.2 1 23 1398 1421 1398 1421 0.97

11 14 0.0016 0.55 13.4 1.4 1 23 1463 1487 1463 1487 0.97

12 14 0.022 7.6 9.8 1.1 1 23 1623 1646 1623 1646 0.96

13 14 0.018 6.2 10.1 0.4 2 23 1699 1720 1698 1720 0.94

14 14 0.014 5 10.4 4.5 1 23 1726 1748 1726 1748 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0022	0.78	12.9	0.3	1	23	101	123	101	123	0.99
2	14	1.2e-05	0.0041	20.1	0.2	1	23	141	163	141	163	0.98
3	14	1.1e-06	0.0004	23.3	2.6	1	23	169	191	169	191	0.99
4	14	0.012	4.4	10.6	1.5	2	23	240	262	239	262	0.92
5	14	0.022	7.6	9.8	0.1	1	23	498	520	498	520	0.97
6	14	1.1	3.9e+02	4.4	3.7	1	23	534	555	534	555	0.96
7	14	0.017	6.1	10.1	3.6	1	23	561	584	561	584	0.97
8	14	0.026	9.2	9.6	4.9	1	23	1018	1041	1018	1041	0.95
9	14	0.0011	0.37	14.0	0.4	2	23	1371	1392	1370	1392	0.97
10	14	0.19	68	6.8	5.2	1	23	1398	1421	1398	1421	0.97
11	14	0.0016	0.55	13.4	1.4	1	23	1463	1487	1463	1487	0.97
12	14	0.022	7.6	9.8	1.1	1	23	1623	1646	1623	1646	0.96
13	14	0.018	6.2	10.1	0.4	2	23	1699	1720	1698	1720	0.94
14	14	0.014	5	10.4	4.5	1	23	1726	1748	1726	1748	0.98

Sequence Information

Coding Sequence: ATGGAGATAGCCAGCGAAGAGGAGCCAAAAGAGTGTGAGGAGGAGGAGGAGGAGGGAGTGTGGGAGGAGGGGAAGGAGGAGGAGGTGGTGGAGGGAGGGGAAGATGCCGAAGAGGAGGAGGAGGAAGAGGAGCCAGAGGAAGAGGAAGACAAGGTGCAAAGCAGCAAAAAGGAAGAAGATCCAAAAGGAGAATCTGGATTGATTGGAGCCAGGAAAAGAAAGTCCAACAAAGTTATGAAACGAGAGGTGGAACCACGTTCAGAGTCCACGGAGGAAGAGGGCAAACCAGATGAAGTGCGATACGTATGTCCCATATGCGAAGACGTGCTGAGTTCGCAGCATCTTTTCACCGTGCATATACGTTCGCACAACGCGGCGGAGAGCAGCTCCGGGGGCGGATCTCCCGGCGGCTCGAAGGCCTTCAGCTGTCGAAtctgtgggaaggccctcagctcctccagctccctggaccgtcacatgttggtgcactcgggcgagcggccattcaagtgtaagctgtgcggggtggcgttcaccaccaacggcaacatgcatcgtcacatgcgcacccacgccaccgCCACCAGCAAAGAGGCCGAGGAGGTGAGCGACGGAGGCAGCTCGGACAGCGGCGGCTCCAAGAGGGGCAAAACCCCCGGAAGGAAGAGACAGGTCGAAGGTGTTAAAGGGAGGAGAAAGGGGAAGGAGGGAGGATGGCGGTGCTTGACTTGCGACCTCTCCTTCACCAACCACAGGGAACTGCGTCTGCACGCGTACATGACGCACCGGGAGATGGAGGCCGAGGAGGAAGACGACGACGAGGAGGTCGAGGAAGAGGAAAGGGGGCGCAAGAGGTCAAGAAGGGCCGAAGGGACCCCTACTCTCGGTTTCCAGGACCTGACTTTCGTCGACTTTTCGACAAGCAAGTTTCCGCTGATTGCGAAGGCGGCTTGCGAGAAATCCGTGCACCGCGCCTCGAGCGAGTTTCATCGCTTTCACTGCGGGCGCTGCGACCGCGCCTTTCCCTGCGGCTCCGCGCTTCACATCCACGCCGACTCGCTGCACGGGTCCAACTCCCCCGCGGCGCCGTCGGCAGATCCCAAAGAGGACTTCTTCGCTGTGCTCAATCTGCAGAACAAAACGAGGTGCTGCTCTTCTCCTCAGGCCCTGAAGATGCTCCGGCAGAACTCGCCATCCATCTCTCACTTGCCCCCGGCGGAAAGGAAGAGGCGGGAGGAAGAGTTCGACAACGCTTTCTACTTCAATGCTACCAAGGAGGCACGTCTGGCGGAGGAGAACGGTAATGAAGCGTCGGAGGCCCCTAAGGACCTTGCAGACATCAGCAGCATCATATCGGCGGTGGCAGGCAACGCCACGGGTTTGATGAGGTCGGTGGAAGATGAGGAGGGTTCTGAAGAGGAAGAAGAAGAGCAGGAGGAGGAAGATGCTACTTTCGCGGCAGAGCTGAGAGAGATGAAGGCGAGAGGGGAGTTTCCTTGCAAGCTATGCCCCTCGGTGTTCCCCAACCTGCGTGCCCTCAAAGGACACGGGCGTTACCATGTTGCGGAGGTGGGGGAGACGGAAGGAGACGAGGAGCGGCACCCTTGCTGCTTGTGCGGGCGTCGAGTAGCCAAGCATGCTCTGGCGCGGCACCTTCGATCCCACAATGGTGAGAGACCTTTCCGGTGCGCGCTCTGCCGGTACGCCTTCACGACGAAAGCCAATTGCGAGCGTCATCTAAGAAATAGGCATTCCAAAGTGTCAAGGGAGGAGGTGCGACGCTCTGTCATGTACTCCCCAGTGGGTGAAGAGCCAGCCGAGGGCGAGACGGAGACCAAAGCCCATGAGCCACTCATCCCCAGTAAGCTTTCAACTTTACTATCTGTGATTTCAGACCCAAAACACGGACTGGAATCATTAGGAAAACCTATCAGTAGAATCGAGGAAAAATCCAAGATATCTGACGAGGAAGAAGATCTGCGCAGCAAGGGCAGAGTGGATGACTTGTCCAGCGTCGAAGCCCTTGTGAACTTTGCCAAAAGCCCCTCTTTACCACTCTCTGTGATGAGCAGCCAGATTGCTCTGCAGCATAACGTATTTCGCCCAATACCCATAAAGCGGGAGGGGGGAAATGAAAGCGAGGGTACCGATGCTCCCTTGGACTTAAGCATGGATGCCCTTGATCTGAGCAACAAAAAAACACAGGATGAACCTGAAGACCTTTCTAAGTCTAATTGTGGTAAGATCCGGCCAGCCAGTGTCGCTTTTGACGGCCCACAATTGGTGCCACCAAGGATTCCGTCAGTAACCAGAACATTGACAGTGCCCCCTGAGAATCCACTGATTTCTATGATGCCAAAGATGGACTCTACTCCCGCTACTCTTCCCAATGGGAGTGCTCCAATGGAGGGTGCTCGGCCACCCTCTGCCTCTTTCTACCCAAGTCATCTTCACATGTATCTGAACCCTCAGTTCCCCATGTCAGCAACCACAAGGCCATCCATGGGCAACTTCCCTTACCTATTGCATACCCTTCCTCTACCCTTCCCTGGTTCCTCACCCACACTTGTTCCTCAACTGCCAGGTGCCCATTCTCCTCTCCGGTCACAATCTCTCATGTCTCCGCCTTCAACTCAGTCTGTAACCTCTCATACTCCTATTCCACCTTTCCCTCGTCAAGGAACTCCCAATCCTACTACACCACCAAACATGGAGCGTCTAGAGAAAGAAATTCTTCGCAACCTGCAACTTTCTTCTGGAGGATCCCTAGTCTTGGATCAAGCTTCCATATCCGACAGAATTCAGGCCCTTGCAATTGCTGCTGCTGCAGCTGCTGGTTTTCCCCCAACAGCCACGACTTCGGAACATCTTCCCCAGTCGATGGCATCCCAAGCCAAAGATTTGAAACCAAATGATCAACCTGTCACTCCAATGGGTGAATCAACCCCAACAAAAGATGATCCAAGAATGCAGCCTGGTGTCAAGATGGTAATAAAGAATGGTGTGCTGATGCCAAAGCAAAAGCAGAGGAGGTATCGCACTGAGCGTCCATTTGCTTGCTGTCATTGCTCTGCTAGGTTTACCCTTAGATCAAATATGGAGAGGCACATTAAGCAGCAGCACCCTGAATTCTGGAGTCAGCGACCTCGAGGAGGAAGAAGAGGAGGTAGTACTGGTCTAACAGCTCCATCCAGAACTGATGCTTCACCATCAGGAGGCGATGGAAGACTTTCCAATTCACCAGATGGACCACTTCCCCCTGCTGCCTCATTGCCAGCAGAATCTGCCGGGAAACCCAGCAGTGATGATGGTGGTTCCGACTACAGGGATGACGATACAATAATGGATGAAAGTGAAAATAATAACACAGATTCAGTCACCGAGGATAGAATGTCCATCTGTGAGTCATCAAATAACGTTGATGATGCAAATGATAAGGCCAAAGATAGTAATAAGACAGTGATCTCAGAGGAGGTGAAGAACGCTCTTGCTCAGCAGCTCAAGTCAAAGCTCATTGCAGATTGTCGATCTGCCTTCAGTCCCTCAGTTAGGAGTGATGATGCTAAAGTGATAAATGCCAAAGAGGAGGTGAGGAAAGGTGCTAAAAACTCCAAAGAAGAAAGAAATGCTGATGATGAGGAGAATAGTGGAGAATTGGTGATAGATGAGGAGAAGGTAGATATGGAGACAGAATGCAGTGGTGGCCGAGGAGGTAATTCGATAACCAAAGAGGATGAGTCAAGTGGTGTAGATCTAGCAAGTGTATCTAAGCTACTAGACAATGCATCAACACAAACTTTTCAGCAGTATTTCAAGTCAGAGGAAGATGAGGAGGCAGATGAGAGACGGAGGGGTGGAGAAGGACGTGGGGGAGAGGATGGGTATGATGGAGGAGCAGATGGGGAGGATGAGGAGGAGGAAGAAGGATGGAAAAGTGGGGATGATAGTGGTGGCAGTAAAGGAGCTTCATCTGGAGAGGAGGAGAGAGCCGAGAGGGAAGACAGTCTTGAGCGTAAGCTGGCATCAGTGACAGTAGAAGCTGCAACAGCAGCTGATACTGAAGATAAAGGCAAACGAAGAAGTGCATACTCATCAGCACCAAATCGTGTCTCCTGTCCATACTGCTTGAGGAAGTTCCCTTGGCGCAGTTCATTGAGgcgacacatcctcactcacactggacaaaagccttacaagtgtgctcattgcccTCTGCTCTTCACCACTAAGTCTAACTGCGACCGTCACCTGCTGAGGAAGCATGGAAAGGGCAGTGGGGGAAGTAGCAGCGGTGCTGAAGATACAGTTTCTGTGCTTAATTCTTCTGGAAATGGTGCTGTCTCTCCAGGAGGAGCATATGCAATGAGGAATGTTCCAGAGCGACCTTACAAATGCAGCGTATGTCCCAGTTCCACTTTTTCAACCCAGAACAATCTGAAGAAGCATCTGGCCACCAAACACCAACATCTCCAAGTTCCAACTAATGGAAGGTGCTCAACATCTCCCAAAGGAGGTTCAGAAAAAGCCGGATCAGTATCTTCGGCAGGCAGTCCAAGATGTGCCACTGAAGAGAGAGATATGGAGGATGAGGAAGATGAAGAGGGTCTGGTTGGTGCTGAGGATGAGGATGGTCTACTTGAAGAGGAGGATGAGGGAGAGGAAGGAAGTAGTGTTGAGGTTGATAGGGTGATGAAGAAGAAAAAGAATGGCTCAGAAGAGATTAATGATGTACAGAGGAGAGAGCAGGTGAATGGAGAAGATCATGGAAAATCTAAAGAGCACCAGAATATTCATAATCACCAGGTGCCTCCTCATCAACACCTCCACCATCAGCACCATCATCACCACCCTGGCTCTGACCTCCCATTTAAGTGCCATCTGTGCGAACGAAGTTACGCTGAGCGAACTGATGCGTTGAATCACATTCGAGACTCTCACTCATCTGAATATGAACTTCTTGTTGCTAAGGGAGCCCTTGATTCTGCTGCAGCTGTTACATCAGAAGATCCTCACAATAACAACAACCATGGCAGAGGGGAAGAGAACTTGGAACAGCTCAGGGGAAAGTTTCCTGATTACGCCAACAGAAAGGTTGTATGTGCATTCTGCATGCGTCGCTTCTGGTCTGCGGAGGATTTAAGgcgccacatgaggactcacactggagagcgtccattctcatgcgacatctgtgcaagacgcttcACTCTCAAGCACAGCATGCTGCGCCACCGCAAAAAACATTCATCCTCAGAGAGAGCGTTAGGAGGGAATCCAATGGCAGCTGCTACTTCAGAGGCCAGCGGAGATGAAGAAGGCAGCACCAACAAGCAGAGGGAGGCACCAATCACCAATTGGCAAAAGGAGGAAGAGGACAAGGATGCCAAGAGGCGCAAGATTTGTGCGCAAGAGATTGGGCTGAAACCATCCATTAGAGGAGGTGCAACTGCTTTAGCGAGTGCCACTACTGACTTAATTGGCAATTTATTAGGAATCCAAGATGGGTCAATTATCGATAAGATGCTGCTGTCCAAGTCTGCAAATGATGCAGCAAAACTATTGGGAGTCGAAAGCCATGATTGA
Protein Sequence: MEIASEEEPKECEEEEEEGVWEEGKEEEVVEGGEDAEEEEEEEEPEEEEDKVQSSKKEEDPKGESGLIGARKRKSNKVMKREVEPRSESTEEEGKPDEVRYVCPICEDVLSSQHLFTVHIRSHNAAESSSGGGSPGGSKAFSCRICGKALSSSSSLDRHMLVHSGERPFKCKLCGVAFTTNGNMHRHMRTHATATSKEAEEVSDGGSSDSGGSKRGKTPGRKRQVEGVKGRRKGKEGGWRCLTCDLSFTNHRELRLHAYMTHREMEAEEEDDDEEVEEEERGRKRSRRAEGTPTLGFQDLTFVDFSTSKFPLIAKAACEKSVHRASSEFHRFHCGRCDRAFPCGSALHIHADSLHGSNSPAAPSADPKEDFFAVLNLQNKTRCCSSPQALKMLRQNSPSISHLPPAERKRREEEFDNAFYFNATKEARLAEENGNEASEAPKDLADISSIISAVAGNATGLMRSVEDEEGSEEEEEEQEEEDATFAAELREMKARGEFPCKLCPSVFPNLRALKGHGRYHVAEVGETEGDEERHPCCLCGRRVAKHALARHLRSHNGERPFRCALCRYAFTTKANCERHLRNRHSKVSREEVRRSVMYSPVGEEPAEGETETKAHEPLIPSKLSTLLSVISDPKHGLESLGKPISRIEEKSKISDEEEDLRSKGRVDDLSSVEALVNFAKSPSLPLSVMSSQIALQHNVFRPIPIKREGGNESEGTDAPLDLSMDALDLSNKKTQDEPEDLSKSNCGKIRPASVAFDGPQLVPPRIPSVTRTLTVPPENPLISMMPKMDSTPATLPNGSAPMEGARPPSASFYPSHLHMYLNPQFPMSATTRPSMGNFPYLLHTLPLPFPGSSPTLVPQLPGAHSPLRSQSLMSPPSTQSVTSHTPIPPFPRQGTPNPTTPPNMERLEKEILRNLQLSSGGSLVLDQASISDRIQALAIAAAAAAGFPPTATTSEHLPQSMASQAKDLKPNDQPVTPMGESTPTKDDPRMQPGVKMVIKNGVLMPKQKQRRYRTERPFACCHCSARFTLRSNMERHIKQQHPEFWSQRPRGGRRGGSTGLTAPSRTDASPSGGDGRLSNSPDGPLPPAASLPAESAGKPSSDDGGSDYRDDDTIMDESENNNTDSVTEDRMSICESSNNVDDANDKAKDSNKTVISEEVKNALAQQLKSKLIADCRSAFSPSVRSDDAKVINAKEEVRKGAKNSKEERNADDEENSGELVIDEEKVDMETECSGGRGGNSITKEDESSGVDLASVSKLLDNASTQTFQQYFKSEEDEEADERRRGGEGRGGEDGYDGGADGEDEEEEEGWKSGDDSGGSKGASSGEEERAEREDSLERKLASVTVEAATAADTEDKGKRRSAYSSAPNRVSCPYCLRKFPWRSSLRRHILTHTGQKPYKCAHCPLLFTTKSNCDRHLLRKHGKGSGGSSSGAEDTVSVLNSSGNGAVSPGGAYAMRNVPERPYKCSVCPSSTFSTQNNLKKHLATKHQHLQVPTNGRCSTSPKGGSEKAGSVSSAGSPRCATEERDMEDEEDEEGLVGAEDEDGLLEEEDEGEEGSSVEVDRVMKKKKNGSEEINDVQRREQVNGEDHGKSKEHQNIHNHQVPPHQHLHHQHHHHHPGSDLPFKCHLCERSYAERTDALNHIRDSHSSEYELLVAKGALDSAAAVTSEDPHNNNNHGRGEENLEQLRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICARRFTLKHSMLRHRKKHSSSERALGGNPMAAATSEASGDEEGSTNKQREAPITNWQKEEEDKDAKRRKICAQEIGLKPSIRGGATALASATTDLIGNLLGIQDGSIIDKMLLSKSANDAAKLLGVESHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01131756;
90% Identity: iTF_01131756;
80% Identity: -