Basic Information

Insect: Sympetrum striolatum
Gene Symbol: -
Assembly: GCA_947579665.1
Location: OX388341.1:105729717-105737538[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.9 1.4e+03 2.8 0.2 1 10 22 31 22 35 0.83

2 16 0.00021 0.074 16.2 0.0 1 23 195 218 195 218 0.96

3 16 0.0027 0.94 12.7 1.1 3 23 224 244 222 244 0.95

4 16 0.51 1.8e+02 5.5 5.6 1 23 279 301 279 301 0.98

5 16 0.076 27 8.1 1.4 1 23 307 329 307 329 0.96

6 16 0.0022 0.78 12.9 0.3 1 23 334 357 334 357 0.96

7 16 0.095 33 7.8 0.1 1 23 640 662 640 662 0.93

8 16 0.016 5.6 10.2 0.4 1 23 695 718 695 718 0.96

9 16 0.0029 1 12.6 3.4 1 23 725 747 725 747 0.95

10 16 8.2e-06 0.0029 20.6 1.5 1 23 753 776 753 776 0.96

11 16 0.016 5.8 10.2 0.9 1 19 807 825 807 829 0.87

12 16 0.0075 2.6 11.3 0.7 1 23 835 857 835 857 0.97

13 16 9e-05 0.031 17.3 2.5 1 23 863 885 863 885 0.98

14 16 1.9e-06 0.00065 22.6 2.8 1 23 891 913 891 913 0.98

15 16 2.6e-05 0.0092 19.0 3.8 1 23 919 941 919 941 0.97

16 16 0.00098 0.34 14.1 0.6 1 23 947 970 947 970 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.9	1.4e+03	2.8	0.2	1	10	22	31	22	35	0.83
2	16	0.00021	0.074	16.2	0.0	1	23	195	218	195	218	0.96
3	16	0.0027	0.94	12.7	1.1	3	23	224	244	222	244	0.95
4	16	0.51	1.8e+02	5.5	5.6	1	23	279	301	279	301	0.98
5	16	0.076	27	8.1	1.4	1	23	307	329	307	329	0.96
6	16	0.0022	0.78	12.9	0.3	1	23	334	357	334	357	0.96
7	16	0.095	33	7.8	0.1	1	23	640	662	640	662	0.93
8	16	0.016	5.6	10.2	0.4	1	23	695	718	695	718	0.96
9	16	0.0029	1	12.6	3.4	1	23	725	747	725	747	0.95
10	16	8.2e-06	0.0029	20.6	1.5	1	23	753	776	753	776	0.96
11	16	0.016	5.8	10.2	0.9	1	19	807	825	807	829	0.87
12	16	0.0075	2.6	11.3	0.7	1	23	835	857	835	857	0.97
13	16	9e-05	0.031	17.3	2.5	1	23	863	885	863	885	0.98
14	16	1.9e-06	0.00065	22.6	2.8	1	23	891	913	891	913	0.98
15	16	2.6e-05	0.0092	19.0	3.8	1	23	919	941	919	941	0.97
16	16	0.00098	0.34	14.1	0.6	1	23	947	970	947	970	0.96

Sequence Information

Coding Sequence: ATGATAACGGAAACAGCGTACGGTTCAAAAATGACTACAAGAAACGACATAAATCTAAAGGACCATAGTTGTTTTATATGTGGAAAGGTGGTTGAAAGTGAACACATACCATTATCATCTGCCAGATTGCAAACATTGCAGAAATCTCTCCTCAACGAAATCAACCCTCAGATTAAACAGTCAATATCTGGCATCACAGTGGATGAAGAGTTCTTATGTCATCAATGTGGGGCTCTTTTGGATTTAGTCAATGATTTGGAAACGAAGCTGATGGATGTGAGATCAACACTTTCGTCGTTATTGTGTAAAAAAATCAAGGATTTTTTTAGCACATCGAAGGTTATCGGCGGAGAATGCCCCAGGATTGGAAGCAGTAATTCTCTACAGAGGGGTAAAAGTTATTGTAAATCATCTCAGAACAACTTCCAAGCAGCAGAGTTATCAACTGGTGAATCAGAAAATCAAGAAAGTGGCTCACTATTGGAAGAAGAATGCAGTTCAGAAAATTTCTGTAAATTGTGTTCATTTTCATCGAATAGTGAAGAAATGTTGAAATTTCATATTTCATCTGAGCATAAGGAATTCGTGTGTAACGAGTGTGACCTAGTATTGGTATCTTCTGATGAACTCAACAACCATATTAAAGAGGAGCATTTAGGCAAGTTGGCGTGCCGTATCTGTGATAAAGTGTTTTTCAGTAAACTTTCATTTACAAATCATTCAAGGCTGCATTTAAAGGGACTCTCAGGGTTATCAATTGAACAGATTGAAAGGGAAAATGGAGAATTGAATGCCAATTTATTAAGTGAGGGAAGTGCTTCAGCTCTAGAAAATCATCAGTGCAGTTATTGTAACTATTCTACAAGTTGTAAAGATTTGTTTGATGATCACATTCGTAGTCATGTGGCTTTGAAACTCTTTAAGTGCATAACTTGTAGTCTATTATTCGAGAGTAAGTCATTGTTGAATGAACATAAAAGAAGTCATGATAAATTAATGTATGTATGTGGATTGTGCAGGAGATCATTTATATCTCGAGATCTTGTCATTAATCACTTAAAAGAGAGGCACAAACAGTCTTCAGAAAAATCTGATCTCAAACAAATGAAAGTGAAACAGGAATACAAAAATCAACTTTCTGATTTAAATGTGAAGAATTTTATGGAAAATATTTCTTCAGTTGCCTCTTGTAGTTCCTCAATGAGTACGAGTAATATGTATCCTAAAGGTGCTGTATCCTCTTCTGCAAAAAAAACTGAAATTGTTAAAAAAGAAAACTTAGGTGCTGCTTTGTCAGAAGAATTTACTAACGTTATTCACCCAGAAGCATCGAAGAAAGAAATTTCCAGACTGAGCTGTAATTTTGCGGAAGGATTTGAAAGTGAGTCTTTAAGTGAGAAAACTCCGTCAATCATTGAAAAGACTTTTCTAAAGATAGGAAATTGTTTTAAAATTCAAGAAAATCCTAGCAAGATTAGCTCCTCTCGATCTTTGCTAGGGTCCATTAAAAGTACTACAACTCAACAGAATCAAATTGGAATGATGTCTTGTCCAAAAGAAGATAAAGTTGTGGGTAGATCAGATGTACATCTTGTTCCAGTTTTTCAAAATATGGTGGATTCATGCAATGATGGATCAGGTTTTTCATCGGCTGATATTAGTTCGGAAGGTCTAATCATTCATTCTAGCAGAGAAGGCTCTTCTACTAAATACAGTGAAGTTAAATGTCAGTTATTAGGAAGTAGGGAAAATAATATGAATGAAAATTCAATAACTGAGGTAAAGTTATTGGAGGATAATGAGAATGACAAAAATGAGGGCCTTTGGGTTTCTCTCAGCTCCTTCGTTGACTCGGAAAACTTGAGTGGACCACTGGAAGAAAATCAGGCAGTCAAAGGGGAGAAGCACTCAAAATTATTTATTTGTGGAAAATGTGGTTATAAATCTTTCTCGGCCTCTGAAATCACAGAACATGTAGCTTCTCATTCAGGAGGAACTTCGGAGAAAGTGCTCTTGGATGATGGAGGGACAAGCAGTGCTCAACCTCCTCTGCTAGGTAACGTTGCCAGTGCTGACATTAAATTTTCATGTTCTTATTGTGCATGGAAATCAAATGATAAACTTGACCTGCGCAACCACATCAATGAAAATCATTCAAATAAAAATGCCGTTTACATTTGCGGCTTCTGTAAGAAGAAATTCACATCAAAGCTTCAGTTAACTCATCATGAAGTGAGTCATGGCCGAACCAAAATTTTCCGGTGCAAAATTTGCAAAAAAGGATTTTCCAGGGAAAATCTACTTAACAGACACGTACGCTTTGCGCATTCCAGCAGTAAGTGTTGCTTCTGCACAAAAACTCTCCATAGCATGGAGGAGTTATCTGAGCATAAAAGTAAACATGAACAAGAAGACGGGTATCAGTGCCTCGAATGTCCTAGGATATTCAAAACAAAGACTGGTCTGAAATTTCATTCTGCGCAGCACACTGGTGAGTACAAGTTCCGGTGCCAGTATTGTGATCAAGGATTCATGTCCAGGGTGGTTTATCAGGAGCATATGGGTAAGCACACAAAAGAGGAAAGATACGTATGTGATATATGTGGTAGAAAATTCTGCTTTCAGAGTACATACTGGATCCATCGCAAATGGCATGACACTCCTTTCCCATACAAATGCGACATATGTGATCGACCATTTCGTCATTCTTCATTGCTGAAAGTGCACAAGAGACAGCATACTGGAGAGCGCCCTTATCATTGTCCTCACTGTTCTCGTTCTTTCTCCGTGAGTGGAACGCTCAAGAGACATCTAATGTTACACACGGGAGATTATGCATTTAGCTGTGGGGAATGTGAGAAAGGATTCACAACAAGGAACAAGTTTGCCCTCCATCTTTCACGTGTGCATGGAAATGATTCTTTGCTTCAGCAAGGTCCACCAAAAACTGAGTTCAAGATGGTTATCAGAGATAGTCCTAAATCTCCTGAGGGGAAAGTGCTTGAGGGCAAGGTGAATGAAGAGGATCTAATTGTTCAGAATTATGATGAATTGGATTCAATGATGGTTCAGGATGGTGGTATTGTTGGTGATGGGGCGGATCTCCTCAAGGAATCCAGCCTTATGTTGCCATGCTCAATTCTTGATGATGTTAGTGGAAGCCTCGAGACGAGGGTGGTGGAAATTTTAGTGAATGATGAAACATCTCAGGCTGTAGCCACTGTCACTGTGGAAGGAAATTCATCTCTGGTTTCCTGGTAG
Protein Sequence: MITETAYGSKMTTRNDINLKDHSCFICGKVVESEHIPLSSARLQTLQKSLLNEINPQIKQSISGITVDEEFLCHQCGALLDLVNDLETKLMDVRSTLSSLLCKKIKDFFSTSKVIGGECPRIGSSNSLQRGKSYCKSSQNNFQAAELSTGESENQESGSLLEEECSSENFCKLCSFSSNSEEMLKFHISSEHKEFVCNECDLVLVSSDELNNHIKEEHLGKLACRICDKVFFSKLSFTNHSRLHLKGLSGLSIEQIERENGELNANLLSEGSASALENHQCSYCNYSTSCKDLFDDHIRSHVALKLFKCITCSLLFESKSLLNEHKRSHDKLMYVCGLCRRSFISRDLVINHLKERHKQSSEKSDLKQMKVKQEYKNQLSDLNVKNFMENISSVASCSSSMSTSNMYPKGAVSSSAKKTEIVKKENLGAALSEEFTNVIHPEASKKEISRLSCNFAEGFESESLSEKTPSIIEKTFLKIGNCFKIQENPSKISSSRSLLGSIKSTTTQQNQIGMMSCPKEDKVVGRSDVHLVPVFQNMVDSCNDGSGFSSADISSEGLIIHSSREGSSTKYSEVKCQLLGSRENNMNENSITEVKLLEDNENDKNEGLWVSLSSFVDSENLSGPLEENQAVKGEKHSKLFICGKCGYKSFSASEITEHVASHSGGTSEKVLLDDGGTSSAQPPLLGNVASADIKFSCSYCAWKSNDKLDLRNHINENHSNKNAVYICGFCKKKFTSKLQLTHHEVSHGRTKIFRCKICKKGFSRENLLNRHVRFAHSSSKCCFCTKTLHSMEELSEHKSKHEQEDGYQCLECPRIFKTKTGLKFHSAQHTGEYKFRCQYCDQGFMSRVVYQEHMGKHTKEERYVCDICGRKFCFQSTYWIHRKWHDTPFPYKCDICDRPFRHSSLLKVHKRQHTGERPYHCPHCSRSFSVSGTLKRHLMLHTGDYAFSCGECEKGFTTRNKFALHLSRVHGNDSLLQQGPPKTEFKMVIRDSPKSPEGKVLEGKVNEEDLIVQNYDELDSMMVQDGGIVGDGADLLKESSLMLPCSILDDVSGSLETRVVEILVNDETSQAVATVTVEGNSSLVSW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -