Basic Information

Insect: Sympetrum striolatum
Gene Symbol: -
Assembly: GCA_947579665.1
Location: OX388343.1:74803073-74809585[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.32 1.1e+02 6.2 0.3 3 23 213 234 212 234 0.96

2 19 0.096 33 7.8 3.6 1 23 239 261 239 261 0.95

3 19 7.8e-05 0.027 17.5 1.0 2 23 364 385 363 385 0.93

4 19 0.0037 1.3 12.3 5.3 1 23 393 415 393 415 0.94

5 19 0.0016 0.57 13.4 0.3 1 23 421 443 421 443 0.99

6 19 4.1 1.4e+03 2.7 0.3 1 23 449 471 449 471 0.90

7 19 8.7e-07 0.0003 23.7 2.0 1 23 477 499 477 499 0.99

8 19 5.6e-05 0.02 18.0 0.3 1 23 505 527 505 527 0.95

9 19 4.3e-06 0.0015 21.5 2.3 1 23 532 554 532 554 0.99

10 19 0.00012 0.041 17.0 2.0 1 20 560 579 560 581 0.93

11 19 0.002 0.7 13.1 1.0 3 23 588 608 586 608 0.97

12 19 0.0029 1 12.6 0.4 1 23 614 636 614 636 0.97

13 19 0.00044 0.16 15.1 0.4 2 23 642 663 641 663 0.96

14 19 0.019 6.7 10.0 0.0 2 23 666 687 665 687 0.93

15 19 7.8e-05 0.027 17.5 0.7 1 23 716 738 716 738 0.99

16 19 0.00014 0.048 16.8 0.7 1 23 744 766 744 766 0.98

17 19 0.00016 0.057 16.5 0.7 1 23 800 822 800 822 0.98

18 19 1.5e-06 0.00053 22.9 2.5 1 23 832 854 832 854 0.99

19 19 0.19 67 6.8 5.0 1 20 860 879 860 881 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.32	1.1e+02	6.2	0.3	3	23	213	234	212	234	0.96
2	19	0.096	33	7.8	3.6	1	23	239	261	239	261	0.95
3	19	7.8e-05	0.027	17.5	1.0	2	23	364	385	363	385	0.93
4	19	0.0037	1.3	12.3	5.3	1	23	393	415	393	415	0.94
5	19	0.0016	0.57	13.4	0.3	1	23	421	443	421	443	0.99
6	19	4.1	1.4e+03	2.7	0.3	1	23	449	471	449	471	0.90
7	19	8.7e-07	0.0003	23.7	2.0	1	23	477	499	477	499	0.99
8	19	5.6e-05	0.02	18.0	0.3	1	23	505	527	505	527	0.95
9	19	4.3e-06	0.0015	21.5	2.3	1	23	532	554	532	554	0.99
10	19	0.00012	0.041	17.0	2.0	1	20	560	579	560	581	0.93
11	19	0.002	0.7	13.1	1.0	3	23	588	608	586	608	0.97
12	19	0.0029	1	12.6	0.4	1	23	614	636	614	636	0.97
13	19	0.00044	0.16	15.1	0.4	2	23	642	663	641	663	0.96
14	19	0.019	6.7	10.0	0.0	2	23	666	687	665	687	0.93
15	19	7.8e-05	0.027	17.5	0.7	1	23	716	738	716	738	0.99
16	19	0.00014	0.048	16.8	0.7	1	23	744	766	744	766	0.98
17	19	0.00016	0.057	16.5	0.7	1	23	800	822	800	822	0.98
18	19	1.5e-06	0.00053	22.9	2.5	1	23	832	854	832	854	0.99
19	19	0.19	67	6.8	5.0	1	20	860	879	860	881	0.93

Sequence Information

Coding Sequence: ATGGTCTCAATATATTCCGAAGAAGGGAAAAGGATGGCCTTGGCTTACAAGATCAATAAACACCTTCCATTTACAGTTTCCCCACAAAATAAACTGCCACTGGTGGTTTGTCAAGATTGCATATCAGAGTTGAATGCATCTATGAATTTTATCCAGCGATGTATGGAGAATCAGGTTAGGCTGAGAAAGCTGCTCAATATCTCTGTTGAGGATTGCGACTATGAAACTAAGGAAATCTATGAGACAAAATATCAGAGAAAATCACCTAAAAGAAGAAAAATCACAAAGGCTGTGTCAGGAAAAGGGTCAAATCATGTCAAAGATGAGCCATTGGAAGACACTTCTGAAATAATTGTTGAAAATAATGATCAGGGAGAAGAGGAAATAGAGATTTATGAGGTTGAAGTAGAAAAACACTCACTTAATGTTGAGTTATTGGATATTGAAAGTCAAGAAGGTAGTGTTTTGTCTTCTAGTGAAGCTGAGGTTAAACCATTTGTGGGATTTGAAAATAATGATGAAATAGAAAATGTTTCCCAAGAAACCAAGTCTTTGGATGATGTTGGGGAGGGTGCTACAATAGAAGACACTGCTACTGATACCGTTACCAAAGGAAGTTCTGATCTCAGGCAATTTTGCAAATTTTGTGATGCAGGCTTTGTTTGGAAGGCTGACCTTTTCACTCACCAAATAAAGATGCATCCTGATTTAGTGTTTCGTTGTTGCTTCTGCCTAAAGGTTTTCTATGACAAAGACGAATTTTACTCACATGAGTTGGCTCATCGGAAACAACTCTTGCCTGGAATCAAGGGAAAGTTAGGCTTACGAAAGCTCTTGAAAGGGAACCATGCCAGGGGCTCTTCTAAAGCATTGGGTGAATTATCATTTTCAAACTCCATAGGTACAAAGAGAGGTAATCAAACAGAGGAGGACTCAACCAATAAAGCTTATGGTTTAGCTATAAATCATAGTAGTAATGATATGGATCACAGTGGTGAAATTGGCGAAAAAGTTAGTTTAAATGGAATACCATCCGATTCTTCAAATGATAAAAGGAAGCAAGTTAGGCAAGATTATAATACACGACTATCTTGTCATTATTGCCCAAGAACATTTAGTAGCAGCATTGGACTTAAGAAACATGAAGTTGTTCATCAGGAAGGAAAAAAGAGAAATTTCCATTGTAAAATATGTGATGCTGTATTTGTTTCAAACCATCTCTTAAAAAAACATTCATTGCATCATTCATCTCAAGATAAGTTTCAATGTGAGATATGCTTGGAGTTTTTCAACTCTAAGATTACAGTAGAAGAGCACATACAAACCCATGCTGGTGAAAGTAGCTATCTGTGTGAACAATGTGGCCTGAATGTAGATTCGTTTGTGATGTTTAGATTACACAAATTGGATCACCTACAGAATGATTATTATAAATGTAATCAATGCCAAAAGTCATTTTCTAATCCAACAAGTTTGAAGAATCATGAGCTTACGCACTCTAAGAAAAAGAAATTTCTTTGTAAGGTATGTGGGGAAAATTTCTCCACTGCTGATCTTTTGAAAGAACACAAACTCTCTCATGAAGGGGAAGATTTcaagtgcgaggtttgtaacaaatccttcacaggatacaagaagcttaggaatcacattcagactcattctgtcggaaagaattacttgtgtgagaaatgtgggaaagatttcaaatccaattccagcctgcataaacaccgctacctttgccaagtcgccattgcctgcactgtctgtggcaaagaattcgactgtaacacacggctgaaagtgcacatgcgagtgcacacaggagaaaaaccttttgtttgctcagtatgcggaaaaggtttccatgcatcgtggtcactcagtcagcaTTCTGCAACTCATAACACTGTGAAAATCCCCTGCCCCCTTTGCGGTGCTCTGTTCAATCGCAAGTCAAATATGCTGACTCATAAGAAAAGGCATCGTGTTCCATGCGGGATTTGTGGTAAGGTATTTGCAAGCATTCCAATTCTGCTTGCTCATCAAAAGTTACATGATGACAATGCTAATAAAGAGGATGTAAGTGAATCCCCTAAAGACGATATAAATGAATCCCCTAAAGATGATTCCTCAGTTGCTtttaggtgtgagcagtgtgggaaactttttatgacaactctagacttgaaagctcacatgtccacccattccaatgagcgtccttacacttgtgatatctgtgggaaaagttggaggctccagaaaacactcaaaaagcatatggtgatgcacagtggtcgaaaaccctatcagtgtcgcTATTGCACTTGTACATTTTTACTGCACCAAAGATTAGTTAAGCATGAGAATGGGCACACAGCGGGCAAACCCTTTACCTGTCAGGACTGTGGCCAATCATTCTGGACTCAGTTGAATCTCGAAAAGCACACTATAAGACATTGTGCTATGAAGATGGTAGATCAGAAATATACCTGTAAAGTTTGTGATAAAAATTTTGAAACTAAATCCTCTTTAATGTCTCATAAGCGGTCACATTCTCATCAACTCACTTACTGCTGTTCGTACTGTCCTCAAAAATTTTCTCAGTTACGCTATGCACAAAGGCATAAGTGTGCTCTGGATCCAAATAATCAGGCAAGAGATTCCTCTGTTGGTGATGTAATATTTAAATCCTTACCTTCTTTGGCAGAGGAGGAATCCTGCAGTCCTGATGAAAACACTTGTCCTAGTGTCCTCAATGAAGAAGTTGTTTATGATATGGACTCTGTTTCCCCATCTTATGCAGAAATTATTGTGATTTCTCAAGGAATGGATGATATTATGGTAGTAAATAATGATAAGTTAGATAATTCTGCATAA
Protein Sequence: MVSIYSEEGKRMALAYKINKHLPFTVSPQNKLPLVVCQDCISELNASMNFIQRCMENQVRLRKLLNISVEDCDYETKEIYETKYQRKSPKRRKITKAVSGKGSNHVKDEPLEDTSEIIVENNDQGEEEIEIYEVEVEKHSLNVELLDIESQEGSVLSSSEAEVKPFVGFENNDEIENVSQETKSLDDVGEGATIEDTATDTVTKGSSDLRQFCKFCDAGFVWKADLFTHQIKMHPDLVFRCCFCLKVFYDKDEFYSHELAHRKQLLPGIKGKLGLRKLLKGNHARGSSKALGELSFSNSIGTKRGNQTEEDSTNKAYGLAINHSSNDMDHSGEIGEKVSLNGIPSDSSNDKRKQVRQDYNTRLSCHYCPRTFSSSIGLKKHEVVHQEGKKRNFHCKICDAVFVSNHLLKKHSLHHSSQDKFQCEICLEFFNSKITVEEHIQTHAGESSYLCEQCGLNVDSFVMFRLHKLDHLQNDYYKCNQCQKSFSNPTSLKNHELTHSKKKKFLCKVCGENFSTADLLKEHKLSHEGEDFKCEVCNKSFTGYKKLRNHIQTHSVGKNYLCEKCGKDFKSNSSLHKHRYLCQVAIACTVCGKEFDCNTRLKVHMRVHTGEKPFVCSVCGKGFHASWSLSQHSATHNTVKIPCPLCGALFNRKSNMLTHKKRHRVPCGICGKVFASIPILLAHQKLHDDNANKEDVSESPKDDINESPKDDSSVAFRCEQCGKLFMTTLDLKAHMSTHSNERPYTCDICGKSWRLQKTLKKHMVMHSGRKPYQCRYCTCTFLLHQRLVKHENGHTAGKPFTCQDCGQSFWTQLNLEKHTIRHCAMKMVDQKYTCKVCDKNFETKSSLMSHKRSHSHQLTYCCSYCPQKFSQLRYAQRHKCALDPNNQARDSSVGDVIFKSLPSLAEEESCSPDENTCPSVLNEEVVYDMDSVSPSYAEIIVISQGMDDIMVVNNDKLDNSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -