Sstr019535.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- ZNF236_7
- Assembly
- GCA_947579665.1
- Location
- CANPUZ010000247.1:41683-93973[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 5.4e-05 0.019 18.0 1.6 1 23 61 83 61 83 0.98 2 16 0.00062 0.22 14.7 0.5 3 23 122 142 122 142 0.99 3 16 6.4e-06 0.0022 20.9 1.4 1 23 148 170 148 170 0.98 4 16 0.0016 0.56 13.4 3.2 1 23 176 198 176 198 0.98 5 16 3.4e-06 0.0012 21.8 5.3 1 23 273 295 273 295 0.99 6 16 0.0019 0.66 13.2 0.2 3 23 303 323 301 323 0.96 7 16 0.00012 0.041 17.0 0.2 1 23 334 357 334 357 0.95 8 16 2.8 9.8e+02 3.2 0.9 1 23 369 392 369 392 0.91 9 16 0.003 1 12.6 7.3 1 23 627 649 627 649 0.98 10 16 0.0033 1.2 12.4 0.4 1 23 655 677 655 677 0.97 11 16 1.5e-05 0.0054 19.7 0.5 1 23 683 705 683 705 0.97 12 16 0.0001 0.036 17.1 2.8 1 23 712 734 712 734 0.99 13 16 1.4e-07 4.9e-05 26.2 4.0 1 23 847 869 847 869 0.98 14 16 2.8e-05 0.0098 18.9 1.4 1 23 875 897 875 897 0.98 15 16 2.6e-05 0.009 19.0 2.0 1 23 910 932 910 932 0.98 16 16 0.00013 0.045 16.8 2.7 1 23 938 960 938 960 0.99
Sequence Information
- Coding Sequence
- ACATCTTCAGCCAAAGAAACAAAGACTGAGAAAAAGGTGGCGGAAGGCGAGAAGAAGACTGAAGAGAGCCCCAAGGCTGCTGGAAACAACTCGTGCATCTTAACGCTGGCAGACAAGGCGCACGACGGATCTGTCAGGCGCTATAACATTAAGGTTCGCCGTGCAGGTGGGGTGAGGTGGCACCAATGTACGTACTGCATCAAAGAGTTCAAGAAACCGTCGGATTTGGTGCGGCACATTCGGATTCATACACACGAGAAACCATACAAGATTGTGGAAATAGTGGGGGCATCCGCGACCCTAATCAATGACATTACTTTCACCAACCCCTCTCCCCTTCTCACTCTGCCTTCAAGACTAGGGTGCAACCAGTGCTTCCGTGCCTTTGCTGTGAAATCCACGCTAACGGTCCATCTGAGGATCCATTCCGGTCTCAAGTCATACGAGTGCGTAACGTGTAAGAAGAAGTTTGCGTCTCAATCTTCTCTTAAAGTCCATCAAAGGCTGCACTCCGGTCTGAAGCCCTTTTCATGTCCCCATTGCCCTCTGCGGTTCCGCACCACAGGACATCAGAAGGCCCACATCTCGTCGCACTTCAGGATCAGGCCGAAGGTGAAGAAGGAGAAGAAACCAGGGAATGAGGATCCAGGGATGAGAAGGGTCCTCCTGCAAGAGCCAATCGTCATTAAACAGAACGTGGAGGGAGACCCTTCTGCTCAGGTCGTGGAGAACCCCCTGCCAGAGGAAATAGTGAACAAAATAGCAGCCGTTCTACCGGAAGGGGCAGTGGCGGAGCAGATGCGAGAGATCAGGCCGTACAAATGCGAGGAGTGCCACGCTGCGTTCAAGAAGCAGTCGCATTTAAGGCAGCACATGAGATCCCACACTGGAGAAAAGCCATTCGGATGTCTCTCATGCAACAAGGCATTCGTATCCAGGGGAGTGCTGAGGGCCCACATCAAGACCCACATTCCATTCATGTCCCCACTCAGAAGACCACACGAGTGCAGTGAGTGTGGGCGGAAATTCGTAGCGGCCGGAAGTTTGAAGCGGCACATAATCAACGCTCACGAAAATCTCAGAAAGACGATCTTGAAGCAGACCTACCTGTGTCCATACTGTCCCACGCCAcccttcaactccaacaaggcttgcaggaagcacataatgacgcactcggatgaactgcttgcggcgcagcaacaagagcagcaggcgcagcaaatggagcagcaggtgcagcaaatagagcagcaggtgcagcaaatggagcagcaggtgcagcaaatggaagaagtcgagcagcatgaagtagATGACATGAACACCTTAAATGTACAGAATCCAGATCCTGTTGATAGTGGAATGATTCAAGAAGAGCATGTTATGGAGGCTACGGAAACCATAGTCATGGAAGCGGACGATAGACTAGAAGCGGAAGTGGACTCAGAAGTGGCGAACAACGTCGTGGTCACATTCTCCCTCAACTTCCAGACAGCGGACGGCTTTGAGCAGCAAGTCAACAATCATTGTACAATCGAAGAAAGTGTCGTCGAAGCCACGTCACAGCCGGTCGCTACCATTTCTCTTCCGGAGCCCCTCACTCAGGAGTCTCTGAGACAAATAGAGCAGACGCTAGGAAGTGGGATGTTCACTGACGCAGACGCAATGGTGGCGCATCCAAGCGAAGCTGCAGCAGAGGCGTCCGTGCACGTCAAAGACCAAGCTCTCGACTTCGAGGCTCACACCATAGCATTTGATCCTTCTGTGTTCTCCACCATAACACTTCCCTCCGGAGAAGGGCTGAATCTTCATCAGACGTTAGAGACCATGGAGCAGCCGGTGGAAATCAAGGAAAAGTTTCGGAAGAAGAAGATTCATAAGTGTTCGTACTGCAATCGTGTCTTCAAGAAGTTCTCCCATCTCAAGCCACACCTTCGCAGCCACACAGGGGAGAAACCCTTCCAGTGTATAATCTGCCTACGGATGTTCGTCACCATGGGAACGCTGAAGGCTCATCTCCGCACCCACACAGGGGAGAAAAGTTTTTCATGTGGGACTTGCGGAGCGACCTTCACCACCAATGGATCCCTCACCAGGCACCAGTCGCTGCATTCAGATCAAAACCGTCCATTCCAGTGCGAGAGGTGTCCGTTAAGTTTCTGCACCAAGGGCCAGTGGAGGAGGCATTGGAGATCTCACGAAGCCGAGCTCATTGGCAAAGAGGCAACGCAGGAAGTTGCGCAGACTGAAGAAGTCGGACCTTCACCAGAGCCTGAGAGACCTCCGAAAACGCCCCAGCCGAGAGCAGTGAGCCAGACCAAGAGGGTTGGTGGGAGGAGGCGCGTTGGGGAAACGCCAGGGGCGGGAGTGATACGCTTGAGCGAAGAGGAGACGGCTCGTTTAGCCCTCCAGAGTCCATCACAGCCTCACCTCTCTCTGTCCGAGAGGGTCCTCATCGCATCTGCTGCAGAAAAGGAAAGGATCAGCGAAATTAACGAAAGGGAGAGGCAGCTGCAACACGCACCCAAACTGCCGCACGTCtgctcccactgccccaagagcttccggaagccatcagaccttcagaggcacatccgcacccacacaggggagcggccgttcgaatgtgacaagtgtgggaggcgcttcaccgtcaaATCCACCCTCGACTCCCACCGGCTCACACATCCCGAGGACGGGCACAAGCAGGTGTACCACCCCAAGTACCCATGCCACGTCTGCGGGTGCCTCTTTGCGACCAAGGGAAGCCTCAAGGTTCACATGCGCCTTCACACAGGTGCCAGGCCGTTCAAATGCCCGTATTGCGAGTTACGCTTCCGCACGTCTGGGCACAGGAAGGCGCACCTGCTCACGCATTTAAGGCCCGCGATGATGGACGGGAAAAGGCGCGGGAGGAAACCCAGGGCGGTGGCAATATCCGAGGCCATCCGCTCCATGGACGCCACTCTGCAAGACAACGCGGCAGCCGAGAATCCGTCTTCGGACGTCGTGGAAGACTGGGGCACACTACAGGCTAATCTCGGAGGAGGCAGTGGTGCGTTCCAGCTGCAGCTTGAAAACGGCAGCCTCTCTCTCCAGCTGGACGAGGGCCTCCTCAGGCAGATGCAGCAGCAGGGACTGGTCCACGAAGAGGAGCCTAAGTCATCAGCTGATGAGAACACGGAAAAGGTTTCGGAGCAGCTGGTGTTTGAGACTGGCGACGTCGGAAGCCTTTTTGGTTCCCCTCTTCAAGTGATCTTGGACGACACCAAAAGGAGAGGCATGGAGAACGCCATGTGGGCGGACAGCAGCGAACCGTTGGTGATCGACGGGGACTTTGTGTTGGAAGAGGAAGGCACTTTGAGGCAGGTCATCGGAGGCGAGTACGTCGTGGTGACGGGTCTGCAGGAGGAGAAAGTGTCCAAGCAGTGGGTTTGTGTTATGAAAAAGAATGTCACCCTCCCGTCCGGATTGCAAGCTACAGTTGGTTTGCAAGAGAACCTCTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCTCTCCCTACCCACCCTCTGCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCACTCCCTACCCACCCACTCCCTTCCCACCTACTCCCTACCCACCCTCTCCCTACCCACCCACTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCGACTCCCTACCCACCCTCTCCCTACCCACCCACTCCCTTCCCACCTACTCCCTACCCACCCTCTCCCTACCCACCCACTCCCTTCCCACCTACTCCCTACCCACCCTCTCCCTACCCACCTACTCCCTGCCCACCCTCTCCCTACCCACCATCTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCACTCCCTACCCACCCACTCCCTTCCCACCTACTCCCTACCCACCCTCTCCCTACCCACCCACTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCGACTCCCTACTCACCCTCTCCCTACCCACCCACTCCCTTCCCACCTACTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCTCTCCCTACCCACCCTCACCCTTCCCACCTACTCCCTACCCACCGTCTCCCTTCCCACCTACTCCCTGCCCACCCTCTCCCTACCCACCATCTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCACTCCCTACCCACCCACTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCACTCCCTTCCCACCCTCTCCCTACCCATCCACTCCCTACCCACCCACTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCAGTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCACTCCCTACCCACCCACTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCACTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCACTCCCTACCCACCCACTCCCTATCCACCCTCTCCATACTCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCACTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCACTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTTCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTCTTCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTCTTCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTTACCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCACTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTACCTACCCACCCTCTCCCTACCCACCCACTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCTCTCCCTACCCATCCACTCCCTACCCACCCACTCCCTTCCCACCCTCTCCCTACCCACCCACTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCACTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCACTCCCTACCCACCCTCTCCCTTCCCACCTACTCCCTACCCACCCACTCCCTATCCACCCTCTCCATACTCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCACTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCACTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTTCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCATACTCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCACTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCACTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTTCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTCTTCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCTCTCCCTTCCCACCCTCTCCCTTACCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTACCCACCCTCTCCCTTCCCACCCCCTCCATTCCCACCCTTTAG
- Protein Sequence
- TSSAKETKTEKKVAEGEKKTEESPKAAGNNSCILTLADKAHDGSVRRYNIKVRRAGGVRWHQCTYCIKEFKKPSDLVRHIRIHTHEKPYKIVEIVGASATLINDITFTNPSPLLTLPSRLGCNQCFRAFAVKSTLTVHLRIHSGLKSYECVTCKKKFASQSSLKVHQRLHSGLKPFSCPHCPLRFRTTGHQKAHISSHFRIRPKVKKEKKPGNEDPGMRRVLLQEPIVIKQNVEGDPSAQVVENPLPEEIVNKIAAVLPEGAVAEQMREIRPYKCEECHAAFKKQSHLRQHMRSHTGEKPFGCLSCNKAFVSRGVLRAHIKTHIPFMSPLRRPHECSECGRKFVAAGSLKRHIINAHENLRKTILKQTYLCPYCPTPPFNSNKACRKHIMTHSDELLAAQQQEQQAQQMEQQVQQIEQQVQQMEQQVQQMEEVEQHEVDDMNTLNVQNPDPVDSGMIQEEHVMEATETIVMEADDRLEAEVDSEVANNVVVTFSLNFQTADGFEQQVNNHCTIEESVVEATSQPVATISLPEPLTQESLRQIEQTLGSGMFTDADAMVAHPSEAAAEASVHVKDQALDFEAHTIAFDPSVFSTITLPSGEGLNLHQTLETMEQPVEIKEKFRKKKIHKCSYCNRVFKKFSHLKPHLRSHTGEKPFQCIICLRMFVTMGTLKAHLRTHTGEKSFSCGTCGATFTTNGSLTRHQSLHSDQNRPFQCERCPLSFCTKGQWRRHWRSHEAELIGKEATQEVAQTEEVGPSPEPERPPKTPQPRAVSQTKRVGGRRRVGETPGAGVIRLSEEETARLALQSPSQPHLSLSERVLIASAAEKERISEINERERQLQHAPKLPHVCSHCPKSFRKPSDLQRHIRTHTGERPFECDKCGRRFTVKSTLDSHRLTHPEDGHKQVYHPKYPCHVCGCLFATKGSLKVHMRLHTGARPFKCPYCELRFRTSGHRKAHLLTHLRPAMMDGKRRGRKPRAVAISEAIRSMDATLQDNAAAENPSSDVVEDWGTLQANLGGGSGAFQLQLENGSLSLQLDEGLLRQMQQQGLVHEEEPKSSADENTEKVSEQLVFETGDVGSLFGSPLQVILDDTKRRGMENAMWADSSEPLVIDGDFVLEEEGTLRQVIGGEYVVVTGLQEEKVSKQWVCVMKKNVTLPSGLQATVGLQENLSLPTLSLPTYSLPTLSLPTLCLPTLSLPTYSLPTHSLPTHSLPTYSLPTLSLPTHSLPTLSLPTLSLPTDSLPTLSLPTHSLPTYSLPTLSLPTHSLPTYSLPTLSLPTYSLPTLSLPTISLPTLSLPTYSLPTHSLPTHSLPTYSLPTLSLPTHSLPTLSLPTLSLPTDSLLTLSLPTHSLPTYSLPTLSLPTLSLPTYSLPTLSLPTLTLPTYSLPTVSLPTYSLPTLSLPTISLPTLSLPTYSLPTHSLPTHSLPTLSLPTLSLPTHSLPTLSLPIHSLPTHSLPTLSLPTLSLPTQSLPTLSLPTLSLPTYSLPTHSLPTHSLPTLSLPTLSLPTLSLPTLSLPTLSLPTLSLPTYSLPTHSLPTLSLPTYSLPTHSLPTHSLSTLSILTLSLPTLSLPTLSLPTHSLPTLSLPTLSLPTLSLPTLSLPTHSLPTLSLPTLSLPTLSLPTLFLPTLSLPTLSLPTLSLPTLSLFTLSLPTLSLPTLSLPTLSLPTLSLFTLSLPTLSLPTLSLPTLSLTTLSLPTLSLPTLSLPTLSLPTLSLPTLSLPTLSLPTLSLPTLSLPTHSLPTLSLPTLSLPTLSLPTLYLPTLSLPTHSLPTLSLPTLSLPTLSLPTYSLPTLSLPIHSLPTHSLPTLSLPTHSLPTLSLPTLSLPTLSLPTLSLPTLSLPTHSLPTLSLPTLSLPTLSLPTLSLPTLSLPTLSLPTYSLPTHSLPTLSLPTYSLPTHSLSTLSILTLSLPTLSLPTLSLPTHSLPTLSLPTLSLPTLSLPTLSLPTHSLPTLSLPTLSLPTLSLPTLFLPTLSLPTLSLPTLSLPTLSLPTLSILTLSLPTLSLPTLSLPTHSLPTLSLPTLSLPTLSLPTLSLPTHSLPTLSLPTLSLPTLSLPTLFLPTLSLPTLSLPTLSLPTLSLFTLSLPTLSLPTLSLPTLSLTTLSLPTLSLPTLSLPTLSLPTPSIPTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01385052; iTF_01385049;
- 90% Identity
- -
- 80% Identity
- -