Basic Information

Gene Symbol
ZNF236
Assembly
GCA_947579665.1
Location
CANPUZ010000026.1:21884-94680[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.0023 0.8 12.9 1.1 2 23 52 73 51 73 0.97
2 18 2.8e-06 0.00098 22.1 2.5 1 23 96 118 96 118 0.98
3 18 9.2e-07 0.00032 23.6 0.8 1 23 124 146 124 146 0.98
4 18 7.9e-05 0.028 17.5 0.3 1 23 152 175 152 175 0.97
5 18 0.0058 2 11.6 2.8 1 23 185 208 185 208 0.96
6 18 3.8e-05 0.013 18.5 1.6 1 23 379 401 379 401 0.98
7 18 0.00044 0.15 15.2 0.5 3 23 491 511 491 511 0.99
8 18 4.5e-06 0.0016 21.4 1.4 1 23 517 539 517 539 0.98
9 18 0.0084 2.9 11.1 5.4 1 23 545 567 545 567 0.98
10 18 2.4e-06 0.00084 22.3 5.3 1 23 642 664 642 664 0.99
11 18 0.0013 0.46 13.7 0.2 3 23 672 692 670 692 0.96
12 18 8.2e-05 0.029 17.5 0.2 1 23 703 726 703 726 0.95
13 18 2 6.9e+02 3.7 0.9 1 23 738 761 738 761 0.91
14 18 0.00044 0.15 15.2 3.0 2 23 1052 1073 1051 1073 0.98
15 18 9.8e-08 3.4e-05 26.7 4.0 1 23 1186 1208 1186 1208 0.98
16 18 2e-05 0.0069 19.4 1.4 1 23 1214 1236 1214 1236 0.98
17 18 0.0004 0.14 15.3 3.1 1 23 1249 1271 1249 1271 0.98
18 18 9.1e-05 0.032 17.3 2.7 1 23 1277 1299 1277 1299 0.99

Sequence Information

Coding Sequence
ATGTCAATCCACGGACATGATGTTCACGAAGAGACGGTGCAGTCCATGTTGAATGACCCAGTTTGGCTCCCGGATACGACTTTCGAGAACCAGTTCACAACCATCACAACGGAGGAGACAAGCAGAGAATCCTCTATAACGCAACCGAATCAGAAGTGTCGTCTCTGCAACGCCCTTTTCCGGAAGGCGAGCCAACTCAGGGAGCACATGAAAGAACATTCCAAGGTGAAGGCGTCCTTATCTCGGCGGAACCACAAGAGGAACATCGACAGGTCTTCTTTCATCCACAAGTGCAAGGAATGCCAGAAGGGATTCCAGAAGCCGAGTCAACTAGTGCGGCACATGAGGATCCACACAGGCGAGAAACCGTATGAATGCTCGTTCTGTGGCAAGGCATTCAACCAGAAGGGGTCTCTACAAATTCACATGACGAAGCACACAGGCGACAAGCCTTTCACGTGTGAATTCTGCTCGGCTGGATTCCGACAGAGAGGGAACCTCAGGGCCCACATTCTCCGAGTGCATACGATTCCATGCAGCGGAGAGCCCACCTTCAGGTGCTGTGAATGCCCCTGCGTCTTCCGGAAGCTGGGGTCTCTGAATGTGCACGTTAGCAGAGTGCATGGGAACACTGGTACCACTGCCATCGTCAATGCCACGGTGGCGGCCCTCAAGAAAAGAAAAAGGGATGCGAGTGAGGAGGAAACCGTTGAAGATGAGGTGATGAGACATCTGGCTGCTTTGGAAGAGGCAACGAAGAATCTTGCTGAAGCAGATGAGGACGTTGTTAAGGAAACCAGCAGTGCATCAACTAGTAAAAACGATGCCCAGTGTCCGCCAGTGGAAGAAGCAAGTGAGATAGTTGTCAGTAGCAACAGGAGGGAAGTGTCGGCCGATATTCTGCAGCAGGCTCTTGAAAACAGCGGACTGACATCGGAAGCAAAGAAAGAAGAAACATCTTCAGCCAAAGAAACAAAGACTGAGAAAAAGGTGGCGGAAGGCGAGAAGAAGACTGAAGAGAGCCCCAAGGCTGCTGGAAACAACTCGTGCATCTTAACGCTGGCAGACGAGGCGCACGACCGATCTGTCAGGCGCTATAACATTAAGGTTCGCCGTGCAGGTGGGGTGAGGTGGCACCAATGTACGTACTGCATCAAAGAGTTCAAGAAACCGTCGGATTTGGTGCGGCACATTCGGATTCATACACACGAGAAACCATACAAGggcCGTAGAGCTCTCCTTCCTCCTCACGGAGATGCTCTCGGTTTGCCACATGCTTCTCCCTTTGCTGAATTCGTGCCCTTTTTGCTGCATCACTCACTCTCCTCTCCGAGTGGTCAATGCTTAGAGATGGTCCAGCGTAGAGCAGCCCGATTCATTGTGGAAATAGTGGGGGCATCCACGACCCTAATCAATGACATTACTTTCACCAACCCCTCTCCCCTTCTCACTCTGCCTTCAAGACCAGGGTGCAACCAGTGCTTCCGCGCCTTTGCTGTGAAATCCACACTAACGGTCCATCTGAGGATCCATTCCGGTCTCAAGTCATACGAGTGCGTAACGTGTAAGAAGAAGTTTGCGTCTCAATCTTCTCTTAAAGTCCATCAAAGGCTGCACTCCGGTCTGAAGCCCTTTTCATGTCCCCATTGCCCTCTGCGGTTCTGCACCACAGGACATCAGAAGGCCCACATCTCGTCACACTTCAGGATCAGGCCGAAGGTGAAGAAGGAGAAGAAACCAGGGAATGAGGATCCAGGGATGAGAAGGGTCCTCCTACAAGAGCCAATCGTCATCAAACAGAATGTGGAAGGAGACCCTTCTGCTCAGGTCGTGGAGAACCCCCTGCCAGAGGAAATAGTGAACAAAATAGCAGCCGTTCTACCGGAAGGGGCAGTGGCGGAGCAGATGCGAGAGATCAGGCCGTACAAATGCGAGGAGTGCCACGCTGCGTTCAAGAAGCAGTCGCATTTAAGACAGCACATGAGATCCCACACTGGAGAAAAGCCATTCGGATGTCTCTCATGCAACAAGGCATTCGTATCCAGGGGAGTGCTGAGGGCCCACATCAAGACCCACATTCCATTCATGTCCCCACTCAGAAGGCCACACGAGTGCAGTGAGTGCGGACGGAAATTCGTAGCGGCCGGAAGTTTGAAGAGGCACATAATCAACGCTCACGAAAATCTCAGAAAGACGATCTTGAAGCAGACCTACCTGTGTCCATACTGTCCCACGCCACCCTTCAACTCCAACAAGGCTTGCAGGAAGCACATAATGACGCACTCGGATGAACTGCTTGCGGCGCAGCAACAAGAGCAGCAGGCGCAGCAAATGGAGCAGCAGGTGCAGCAAATAGAGCAGCAGGTGCAGCAAATGGAGCAGCAAATGGAGCAACAGGTGCAGCAAATGGAAGAAGTCGAGCAGCATGAAGTAGATGACATGAACACCTTAAATGTACAGAATCCAGATCCTGTTGATAGTGGAATGATTCAAGAAGAGCATGTTATGGAGGCTACGGAAACCATAGTCATGGAAGCGGATGAAAGACTAGAAGCGGAAGTGGACTCAGAAGTGGCGAACAACGTCGTGGTCACATTCTCCCTCAACTTCCAGACAGCGGACGGCTTTGAGCAGCAAGTCAACAATCATTGTACAATCGAAGAAAGTGTCGTCGAAGCCACGTCACAGCCGGTCGCTACCTTTTCCCTTCCGGAGCCCCTCACTCAGGAGTCTCTGAGACAAATAGAGCAGACGCTAGGAAGTGGGATGTTCACTGACGCAGACGCAATGGTGGCGCATCCAAGCGAAGCTGCAGCAGAGGCGTCGGTGCACGTCAAAGACCAAGCTCTCGACTTTGAGGCTCACACCATAGCATTTGATCCTTCTGTGTTCTCCACTATAACACTTCCCTCCGTGTTCGTACTGCAATCGTGTCTTCAAGAAGTTCTCCCATCTCAAGCCGCACCTTCGCAGCCACACAGGGGAGAAACCCTTCCAGTGTATAATCTGCCTACGGATGTTCGTCACCATGGGAACGCTAAAGGCTCATCTCCGTACCCACACAGGGGAGAAAAGTTTTTCATGTGGGACGTGCGGAGCGACCTTCACCACCAATGGATCCCTCACCAGGCACCAGTCGCTGCATTCAGATCAAAATGCGAGAGGTGTCCGTTAAGTTTCTGCACCAAGGGCCAGTGGAGGAGGCATTGGAGATCTCACGAAGCCGAGCTCATTGGCAAAGAGGCAACGCAGGAAGTTGCGCAGACTGAAGAAGTCGGACCTTCACCAGAGCCTGAGAGACCTCCGAAAACGCCCCAGCCGAGAGCAGTGAGCCAGACCAAGAGGGTTGGCGGGAGGAGGCGCGTTAGGGAAACGCCAGGGGCGGGAGTGATACGCTTGAGCGAAGAGGAGACGGCTCGTTTAGCCCTCCAGAGTCCATCACAGCCTCACCTCTCTCTGTCCGAGAGGGTCCTCATCGCATCTGCTGCAGAAAAGGAAAGGATCAGCGAAATTAACGAAAGGGAGAGGCAGCTGCAACACGCACCCAAACTGCCGCACGTCTGCTCCCACTGCCCCAAGAGCTTCCGGAAGCCATCAGACCTTCAGAGGCACATCCGCACCCACACAGGGGAGCGGCCGTTCGAATGTGACAAGTGTGGGAGGCGCTTCACCGTCAAATCCACCCTCGACTCCCACCGGCTCACACATCCCGAGGACGGGCACAAGCAGATGTACCACCCCAAGTACCCATGCCACGTCTGCAGATGCCTCTTTGCGACCAAGGGAAGCCTCAAGGTTCACATGCGCCTTCACACAGGTGCCAGACCGTTCAAATGCCCGTATTGCGAGTTACGTTTCCGCACGTCTGGGCACAGGAAGGCGCACCTTCTCACGCATTTAAGGCCCGCGATGATGGATGGGAAAAGGCGCGGGAGGAAACCCAAGGCGGTGGCAATATCCGAGGCCATCCGCTCCATGGACGCCACTCTGCAAGACAACGCGGCAGCCGAGAATCCGTCTTCGGACGTCGTGGAAGACTGGGGCACACTACAGGCTAATCTCGGAGGAGGCAGTGGTGCGTTCCAGCTGCAGCTTGAAAACGGCAGCCTCTCTCTCCAGCTGGACGAGGGCCTCCTCAGGCAGATGCAGCAGCAGGGACTGGTCCACGAAGAGGAGCCTAAGTCATCAGCTGATGAGACCACGGAAAAGGTTTCGGAGCAGCTGGTGTTTGAGACTGGCGACGTGGGAAGCCTTTTTGGTTCCCCTCTTCAAGTGATCTTGGACGACACCAAACGGAGAGGCATGGAGAACGCCATGTGGGCGGACAACAGCGAACCGTTGGTGATCGACGGGGACTTTGTGTTGGAAGAGGAAGGCACTTTGAGGCAGGTCATCGGAGGCGAGTACGTCGTGGTGACGGGTCTTCAGGAGGAGAAAGTGTCCAAGCAGGGTTGGTCCAAGAACGAGGGTCCGTGTGGCGGCGAGAAAGAGTCCGGGTCCGTTGGGAGAGCTTCGTATGAAAGGGAGTCCTTCCGAATCTGCGAGAGTCTGGTGCGAGAGTCTGACGTATCTCCGTGCGAGAGTGAGAGCGTGAGCCTTGGTGCGAGAGCGAACTTGAGAGAGCCTGAACTGAGCGGACTGAACTGA
Protein Sequence
MSIHGHDVHEETVQSMLNDPVWLPDTTFENQFTTITTEETSRESSITQPNQKCRLCNALFRKASQLREHMKEHSKVKASLSRRNHKRNIDRSSFIHKCKECQKGFQKPSQLVRHMRIHTGEKPYECSFCGKAFNQKGSLQIHMTKHTGDKPFTCEFCSAGFRQRGNLRAHILRVHTIPCSGEPTFRCCECPCVFRKLGSLNVHVSRVHGNTGTTAIVNATVAALKKRKRDASEEETVEDEVMRHLAALEEATKNLAEADEDVVKETSSASTSKNDAQCPPVEEASEIVVSSNRREVSADILQQALENSGLTSEAKKEETSSAKETKTEKKVAEGEKKTEESPKAAGNNSCILTLADEAHDRSVRRYNIKVRRAGGVRWHQCTYCIKEFKKPSDLVRHIRIHTHEKPYKGRRALLPPHGDALGLPHASPFAEFVPFLLHHSLSSPSGQCLEMVQRRAARFIVEIVGASTTLINDITFTNPSPLLTLPSRPGCNQCFRAFAVKSTLTVHLRIHSGLKSYECVTCKKKFASQSSLKVHQRLHSGLKPFSCPHCPLRFCTTGHQKAHISSHFRIRPKVKKEKKPGNEDPGMRRVLLQEPIVIKQNVEGDPSAQVVENPLPEEIVNKIAAVLPEGAVAEQMREIRPYKCEECHAAFKKQSHLRQHMRSHTGEKPFGCLSCNKAFVSRGVLRAHIKTHIPFMSPLRRPHECSECGRKFVAAGSLKRHIINAHENLRKTILKQTYLCPYCPTPPFNSNKACRKHIMTHSDELLAAQQQEQQAQQMEQQVQQIEQQVQQMEQQMEQQVQQMEEVEQHEVDDMNTLNVQNPDPVDSGMIQEEHVMEATETIVMEADERLEAEVDSEVANNVVVTFSLNFQTADGFEQQVNNHCTIEESVVEATSQPVATFSLPEPLTQESLRQIEQTLGSGMFTDADAMVAHPSEAAAEASVHVKDQALDFEAHTIAFDPSVFSTITLPSVFVLQSCLQEVLPSQAAPSQPHRGETLPVYNLPTDVRHHGNAKGSSPYPHRGEKFFMWDVRSDLHHQWIPHQAPVAAFRSKCERCPLSFCTKGQWRRHWRSHEAELIGKEATQEVAQTEEVGPSPEPERPPKTPQPRAVSQTKRVGGRRRVRETPGAGVIRLSEEETARLALQSPSQPHLSLSERVLIASAAEKERISEINERERQLQHAPKLPHVCSHCPKSFRKPSDLQRHIRTHTGERPFECDKCGRRFTVKSTLDSHRLTHPEDGHKQMYHPKYPCHVCRCLFATKGSLKVHMRLHTGARPFKCPYCELRFRTSGHRKAHLLTHLRPAMMDGKRRGRKPKAVAISEAIRSMDATLQDNAAAENPSSDVVEDWGTLQANLGGGSGAFQLQLENGSLSLQLDEGLLRQMQQQGLVHEEEPKSSADETTEKVSEQLVFETGDVGSLFGSPLQVILDDTKRRGMENAMWADNSEPLVIDGDFVLEEEGTLRQVIGGEYVVVTGLQEEKVSKQGWSKNEGPCGGEKESGSVGRASYERESFRICESLVRESDVSPCESESVSLGARANLREPELSGLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01385038;
80% Identity
-