Sstr015053.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- CAMTA1
- Assembly
- GCA_947579665.1
- Location
- OX388345.1:60291418-60294535[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.026 3.2e+03 0.5 0.1 93 103 75 85 58 91 0.81 2 2 2e-21 2.5e-16 62.1 0.5 33 80 122 168 111 169 0.92
Sequence Information
- Coding Sequence
- ATGGATGGCAGCGCGGGGGAATTCGAGAGAGATGCGTTTTGGGGAACTGATATGAATGGCGTACTTTCCGAAATGTGTTACATCCACCTCCCACTCGGCGAAGCTGGTCCAATTAGCCCTCCCACGAAATTTGTTATCTCTGCACTCTGCTTCGAAATTCGAATTACCCTCGCTCCACGCTTTCAGAAGTGTTTCACGAAGAAGAGCGTTTTTAGGAGCGGAGGATTCAGTCGACGGAGCTATTCCATGCGTCGTAAAGTATTCCCACGAGTGATAAAAAGTGCTCGGGGTGGTGGGTCGAGGGGAGGGGAAAGAGGAGGGGGAGAAGGGGAAACATCATGGCGGCTGATGTCAGAGACCTTTTGGCCTAAGAGCGGTTCTATGCTGTTGTACAGTCGGAAGAAGGTTCGCTACCGTCGGGATGGTTACTGCTGGAAGAAGAGGAAGGACGGGAAGACTACAAGGGAGGACCATATGAAACTCAAGGTCCAGGGAACTGAGGTGAGTCCAAGATAA
- Protein Sequence
- MDGSAGEFERDAFWGTDMNGVLSEMCYIHLPLGEAGPISPPTKFVISALCFEIRITLAPRFQKCFTKKSVFRSGGFSRRSYSMRRKVFPRVIKSARGGGSRGGERGGGEGETSWRLMSETFWPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTEVSPR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -