Sstr056423.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- -
- Assembly
- GCA_947579665.1
- Location
- OX388343.1:53653105-53654622[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-07 0.00031 23.1 0.0 3 38 19 53 17 58 0.93 2 2 9.6 1e+04 -1.0 0.0 1 11 253 263 253 264 0.85
Sequence Information
- Coding Sequence
- ATGCCGCAACATTATAAAAGGAAGGTGAACGACGGAATGTTCATGTGGAGTATAGAGGAAATGAATAATGCAGTTGCAGCAGTAGAAGCAGGTGTTGAGATTCAAGAAGCATCGAGACGATTTTCTGTTCCATTTGGTACCTTTCAGCGCCGAATGAAAGTTGTTAAGGAAGACAACACTCAACGATCTATTGGTGGGCAGACCGTATTTACGGAGGTGCAGGAAAAGGAACTACTTGAGAGACTTCTGTACCTGGAGTCGAAAGGATTTCCATTGACACCACAAGACAAGACTGCACTGCCCATTAACAATCCACCGCTACCAAAAATTTTGGCCTGTAAAGGTGCAAAGAATGAGGAGAAGCGTAAGAAGGCTGACTTTGAACGACACATGCCACCGTCCACTGCGGTGTACATGTCAGAGAGTGGATGGATTAACGAAAACATCTACCTCGCCTGGCTGAAACATTTTGCCAAGCACATGGTATCAGGACATGTTCTGCTTATTCTCGATGGTCATGTGTCACACGTTAAGTTGCTCGATGTTCGACAGGGAATATCAAATCACCATGCTGTGTCTGCCAGGCCACACAACGCACGAACTCCAGCTATTGGACAAGTCCTTTTTCAAGCCATTGAAATCCAGGGCAATTTTGGAGAAATCTTTTCTCAAGCTTGGATGCAGTCCACAACGGTTTCCACGGCAGTAAATGGCGTTAGAGCCACAGGAGTGTTCCCGGTCAACCGTTTTGCAGTGACTGACGACAAACTCACAAAAGCTGTTGAACCCGTGGAATGTGATCCTGTTCCACAACAGCCTCAAGACACCCAAACATGTCAAGAATCGACTCAAGTGAGAAGATTTTTTCCTTCATCTATGAAAATCTCTGTGAAAAGAAAAGCCCCTGGAAGGAATGGACAAGAAGCTGAAGTGCTTACGTCGCCGCAGCATATTGCCTCTCTCGGCAACAGCAAGTCTGGTGAATCTGAACTGGACAAAATAAGAAAAGTGAGCCTCCAAAAAAACCTACCAGCATCTCCAAATGGGCCTGCAGATGGAAATGAAGACAACTGTGGGTTTTGTGGCAGGTACTTTTACACGGCAACCTCCAGCAAGTATAAAAACTAG
- Protein Sequence
- MPQHYKRKVNDGMFMWSIEEMNNAVAAVEAGVEIQEASRRFSVPFGTFQRRMKVVKEDNTQRSIGGQTVFTEVQEKELLERLLYLESKGFPLTPQDKTALPINNPPLPKILACKGAKNEEKRKKADFERHMPPSTAVYMSESGWINENIYLAWLKHFAKHMVSGHVLLILDGHVSHVKLLDVRQGISNHHAVSARPHNARTPAIGQVLFQAIEIQGNFGEIFSQAWMQSTTVSTAVNGVRATGVFPVNRFAVTDDKLTKAVEPVECDPVPQQPQDTQTCQESTQVRRFFPSSMKISVKRKAPGRNGQEAEVLTSPQHIASLGNSKSGESELDKIRKVSLQKNLPASPNGPADGNEDNCGFCGRYFYTATSSKYKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01384567;
- 90% Identity
- -
- 80% Identity
- -