Sstr097709.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- -
- Assembly
- GCA_947579665.1
- Location
- OX388342.1:875929-876324[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-08 3e-05 26.3 0.0 3 40 19 56 17 60 0.90
Sequence Information
- Coding Sequence
- ATGCCACAACATTATAAAAGGAAGGTGAATGGCGGAATGTTCATGTGGAGTATAGAGGAAATTAATAATGCAGTTGCAGCAGTAGAAGCAGGTGTTGGGATTCGAGAAACATCGAGACGATTTTCTGTTCCATTTGGTACCCTTCAGCGCCGAATTGTTAAGGAAGACAACACTCAACGATCCATTGGTGGGCAGACCATATTTACGGAGGTGCAGGAAAAGGAACTTCTTGAGAGACTTCTGTACCTGGAGTCGAAAGGATTTCCATTGACACCACAAGACGACCACAAGGCTGCCTTCAAGCTTGCCGGAGAAAAAAAGATTGCTCATAAATTCAATGTCGCGAAAAAGGAAGCTGGTAAGGATTGGCTAAACAGCTTCATCAAGAGACACTGA
- Protein Sequence
- MPQHYKRKVNGGMFMWSIEEINNAVAAVEAGVGIRETSRRFSVPFGTLQRRIVKEDNTQRSIGGQTIFTEVQEKELLERLLYLESKGFPLTPQDDHKAAFKLAGEKKIAHKFNVAKKEAGKDWLNSFIKRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01384615; iTF_01384609; iTF_01384580; iTF_01384576; iTF_01384581; iTF_01384603; iTF_01384611; iTF_01384585; iTF_01384619; iTF_01384597; iTF_01384574; iTF_01384575; iTF_01384592; iTF_01384577; iTF_01384562; iTF_01384608; iTF_01384586; iTF_01384606;
- 90% Identity
- iTF_01384615;
- 80% Identity
- -