Sstr005054.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- -
- Assembly
- GCA_947579665.1
- Location
- OX388351.1:57748320-57751999[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-09 1e-05 27.8 0.0 7 42 24 59 18 61 0.86
Sequence Information
- Coding Sequence
- ATGCCGAGGACTTATGTTCGGCCACTTGGGACGAGGAATTATCGAAATTACACTGATGAAGCTGTTTGGGATGCTGTCAACCTGCTCCGAAGGGGCAAAATAACCTTACGGAAGGCCGAGGACTTATACGGAATTCCGAAGAGTACATTGTCAACACTACTGAAAGGAAATCCTAAACTTGATTATGGCCGTCCTTCTGTGCTTAATGATGATGAGGAGGAGACGTTTGTGTCGTATTTAGTAACTATGTCAACATATGGGTTCCCTGCAACTTTATACGATTTGAGGTGCGTAGTGAAATCGTACTTGGACGGGAAAGGTGTGAAGAAGACAGGAATCTTCCCCTTGGATCCTGAACAACCCCTCCGAAGACTTCCCTACCGCGTGATGGGAACCGAAAACGCCAACCTTGTTGATCGAGTTGCCAAAGTTTTTGTGGACCATTTGGAGCAACGCCGTGCTGAAACTACTAGAGGAAGAAGTATTTCATCAGAAGACGTGGAAGCTGTACGCCGTCAAAGTGAGGACGCACCATTCAACGGCGGACGTGGGGCTCTTAGCTCACGAGTAACTCGACGCGGACGGGGAGATAGCAGCACCAGCGGTGGAAGGAAGAAAAACGCCCGGTTGGTGATGAACGAAAACTCCAGAAGCAGCTCTGGGAGCGAAGAGGTTGATGACGTTTCTTCCCCTGAAATCTCCGACAGAGAAATGATTTCTGTTCAAGACGAAAACGAAAGCCCTGGACCCTCCGCAGGAAGGGTTCTAATTGATCTTGACGTGGGGCAATTTGGTTTGGTGAATTTTGAGGGGGAACTGTACCCAGGGCACATTACAGAAAAAGACGGGCAAAGTGACAGGTACTTAGTTACAGGTATAGAAAAGTCTGGCGGTTACTGGAAGTGGCCAAGTAGGGAGGACAAAATTTGGTACAGCGCTAACGAAATCGTGCAAGGTATTAACCCCCCTCAAAGAGTAGGAAAGCGCGCTCTGTTCTCTAAGCCAGAGATTGGATCATCTCGTGAAGTCGTTTCCTTTGTTGCCATTTGGGACGTCACAATGAGCACACAGCGGAAGGGCGAGTCGCGTGCATGCGATCCAATCCTCCCGCACGCAACTTCCTCAAGGAACGAAATCATTTTAGAGGCTCTAATGGCCGGTTTATTGCCCGTAAACGAGACGGATGTTCCTTCCTTCATAAGGCAACCATTTTCGTTGGTTCGATCTGATAAAAACACTAATTCTTGA
- Protein Sequence
- MPRTYVRPLGTRNYRNYTDEAVWDAVNLLRRGKITLRKAEDLYGIPKSTLSTLLKGNPKLDYGRPSVLNDDEEETFVSYLVTMSTYGFPATLYDLRCVVKSYLDGKGVKKTGIFPLDPEQPLRRLPYRVMGTENANLVDRVAKVFVDHLEQRRAETTRGRSISSEDVEAVRRQSEDAPFNGGRGALSSRVTRRGRGDSSTSGGRKKNARLVMNENSRSSSGSEEVDDVSSPEISDREMISVQDENESPGPSAGRVLIDLDVGQFGLVNFEGELYPGHITEKDGQSDRYLVTGIEKSGGYWKWPSREDKIWYSANEIVQGINPPQRVGKRALFSKPEIGSSREVVSFVAIWDVTMSTQRKGESRACDPILPHATSSRNEIILEALMAGLLPVNETDVPSFIRQPFSLVRSDKNTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01384600;
- 90% Identity
- iTF_01384600;
- 80% Identity
- -