Sstr111161.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- -
- Assembly
- GCA_947579665.1
- Location
- OX388342.1:120276914-120278492[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-09 6.8e-06 28.4 0.0 3 38 7 41 5 46 0.93 2 2 6 6.5e+03 -0.4 0.0 1 11 296 306 296 307 0.87
Sequence Information
- Coding Sequence
- ATGTTCATGTGGAGTATAGAGGAAATGAATAATGCAGTTGCAGCAGTAGAAGCAGGTGTTGGGATTCAAGAAGCATCGAGACGATTTTCTGTTCCATTTGGTACCTTTCAGCGCCGAATGAAAGTTGTTAAGGAAGACAACACTCAAAGATCCATTGGTGGGCAGACCATATTTACGGAGGTGTTGGAAAAGGAACTTCTTGAGAGACTTCTGCACCTGGAGTCGAAAGGATTTCCATTGACACCACAAGACGTCCACAAGGCTGCCTTCAAGCTTACCGAAGAAGAAAAGATTGCTCATAAATTCAATGTCGCGAAAAAGGAAGCCTGTAAGGATTGGCTGAACAGCTTTATCAAGAGACACGGACAGAAACTGTCGCTGCTTACGAAAGAACGAGGTGAAAATGTAACTGTGATAGCATGCTGCAGTGCATTCGGCTCATTTGTCCCTCCGGGTGTCATTTTCAAGGGGAAGCGTAAGAAGGTCGAGTTTGAACGACACATGCCACCGTCCACTGCGGTGTGCATGTCAGAGAGTGGATGGATTAACGAAAACATCTACCTCGACTGCCTGAAACATTTTGTCAAGCACAAGGTATCAGGACATGTTCTGCTTATTCTCGATGGTCATGTGTCACACGTTAAGTTGCTCGATGTTCGACAGGGAAAATCAAATCACCATGCTGTGCCTGCAAGGCCACACAACGCACGAACTCCAGCCATTGGACAAGTCCTTTTTCAAGCCATTGAAATACAGGTACAGAGCAGCCGCAAATCAGTGGGCAATTTTGGAGAAATATTTTCTCAAGCTTGGATGTCCACTATGGTGTCCACGGCAGTCAATTGCTTTAGAGCCACAGGGCTCCCGGCCAACCGTTTTGCAGTGACTAACGACAAACTCACAAAAGCTGTTGAACCCGTGGAATGTGATCCTGATCCACACCATCCTCAAGACACCCAAACATGTCAAGGATCGACTCAAGTGAGAAGATTTTTTCCTTCATCTATGAAAATCTCTGTGAAAAGAAAAGGCCCTGGAAGGAATAGACAAGAAGCTGAAGTGCTTACGTCGCCGCAGCATATCGCCTATCTAGGCAACAGCAAGTCTGGTGAATCTGAACTGGACAAAATAAGAAAAGTGAGCCTCCAAAAAAACCTACCAGCATCTCCAAATGGGCCAGCAGATGGCAATGAAGGCAACTGTGGGTTTTGTGGCAGGTACTTTTACACGGCAACCTCCAGCAAGTATAAAAACTGGATTGAGTGCATCAAGTGTAATGTATGGTTCCATGAGGTGTGTGTTGGAGCCTCAGGGAAATCTTCTTTTACTAGAGGGAAGTGTATCTAG
- Protein Sequence
- MFMWSIEEMNNAVAAVEAGVGIQEASRRFSVPFGTFQRRMKVVKEDNTQRSIGGQTIFTEVLEKELLERLLHLESKGFPLTPQDVHKAAFKLTEEEKIAHKFNVAKKEACKDWLNSFIKRHGQKLSLLTKERGENVTVIACCSAFGSFVPPGVIFKGKRKKVEFERHMPPSTAVCMSESGWINENIYLDCLKHFVKHKVSGHVLLILDGHVSHVKLLDVRQGKSNHHAVPARPHNARTPAIGQVLFQAIEIQVQSSRKSVGNFGEIFSQAWMSTMVSTAVNCFRATGLPANRFAVTNDKLTKAVEPVECDPDPHHPQDTQTCQGSTQVRRFFPSSMKISVKRKGPGRNRQEAEVLTSPQHIAYLGNSKSGESELDKIRKVSLQKNLPASPNGPADGNEGNCGFCGRYFYTATSSKYKNWIECIKCNVWFHEVCVGASGKSSFTRGKCI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -