Sstr005121.1
Basic Information
- Insect
- Sympetrum striolatum
- Gene Symbol
- -
- Assembly
- GCA_947579665.1
- Location
- OX388351.1:58291878-58293413[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.086 93 5.5 0.0 24 45 199 220 199 220 0.93 2 7 0.26 2.8e+02 4.0 0.0 24 44 221 241 221 242 0.89 3 7 0.086 93 5.5 0.0 24 45 243 264 243 264 0.93 4 7 0.26 2.8e+02 4.0 0.0 24 44 265 285 265 286 0.89 5 7 0.086 93 5.5 0.0 24 45 287 308 287 308 0.93 6 7 0.086 93 5.5 0.0 24 45 309 330 309 330 0.93 7 7 0.086 93 5.5 0.0 24 45 331 352 331 352 0.93
Sequence Information
- Coding Sequence
- ATGTCAAGATTACATCAGCATACACCAACAGAACATGAAGGTATTGTTGAAGCTGGGAGCAACCAATACCCAACACCAGAAATTATGAAAGCTGGAACTCCTGGTGAACAAACTATTGATCCAATAGCATACCATGCTATTTCTTCTGTATCTCCTCTTAGACCACCACTACCTCCACAAGAAGAACCTATCTTCACACCATTATTGCAGCATAATGTTCATTTTGAGCCCCAATGGGCACCCATTGAGCCAGAATACTCAGAAATGGATCCAGCTTGCTTGCTTTGTTTCTCTGAGTGCTTTTCATCACCTTCTAGAGTATCTCCTCCTTTGGTATCACCTCCACAAGTTCCTCCAAGAGCCCCAGTCATCCCAAAAGCTTTTGATACAAGACATTTGGCTCCAACGTCATATCCTGCATCTCCAAAATCACCAGGATATTCGCCAATACCTATGGATGACAGACTATCATTTCAAGTAAGAGACACGAGTCTGAATATGGCTGCAGAGGGACCTCTTCATTCAACATTCTTAGAATCATTGCAAGAACCTGCTATGGGTTATAGATATGAAGTTTCTCCACCTGCTATGCGTCGTACTTATGAAGTCCCACCAAGTGCTCTGCAACGTACATATGAAGTTTCTCCACCTGCTATGCGTCGTACTTATGAAGTCCCACCAAGTGCTCTGCAACGTACATATGAAGTTTCTCCGCCTGCTATGCATCGTACTTATGAAGTCCCACCAAGTGCTCTTCAACGTACATATGAAGTTTCTCCACCTGCTATGCGTCGTACATATGAAGTCCCACCAAGTGCTCTGCAACGTACATATGAAGTTTCTCCACCTGCTATGCATCGTACTTATGAAGTCCCACCAAGTGCTCTGCAACGTACGTATGAAGTTTCTCCACCTGCTATGCGTCGTACATATGAAGTCCCACCAAGTGCTCTGCAACGTACATATGAAGTTTCTCCACCTGCTATGCGTCGTACTTATGAAGTCCCACCAAGTGCTCTGCAACGTACGTATGAAGTTTCTCCACCTGCTATGCGTCGTACATACGAAGTTCCTCCTACTGCTCTGAGCTGCACACATGAGGCTTCTATTCCACAATTCAGTCCAAGAAATCCAAGAAATCCACCAATAGTATCAAAGGAAACATTTTTTGATCCATCTACTACTAGAAACACCAGAAGAAGCACTTTTGATGGTTGTTTTCACAAGAGTAGGCCCGTGTTGCAACAAACACCTAACACAACCTCTTCTTGTGAGTTTTCAGGGATGACCATAAGGTCTGAAGGAACACTACCACCATTGGAAAACATGCCAGAATTTAATTTTGGAGTACTTTCCCCTCAGGATCCAAGGATGGAACAAGCGTTTGAAGGAAACTCTTTAGCAGATGTAATGTTTGTACCTGAAGAGTCTACAGAAAAGTTTGACTTTGGCAATCTCTCAGATGGGTTTCAAAATGATGTAGAATTTGAAGCAGGAGATGACTTTTTAAGGGATATGGAGGATAATCCTTTCTAA
- Protein Sequence
- MSRLHQHTPTEHEGIVEAGSNQYPTPEIMKAGTPGEQTIDPIAYHAISSVSPLRPPLPPQEEPIFTPLLQHNVHFEPQWAPIEPEYSEMDPACLLCFSECFSSPSRVSPPLVSPPQVPPRAPVIPKAFDTRHLAPTSYPASPKSPGYSPIPMDDRLSFQVRDTSLNMAAEGPLHSTFLESLQEPAMGYRYEVSPPAMRRTYEVPPSALQRTYEVSPPAMRRTYEVPPSALQRTYEVSPPAMHRTYEVPPSALQRTYEVSPPAMRRTYEVPPSALQRTYEVSPPAMHRTYEVPPSALQRTYEVSPPAMRRTYEVPPSALQRTYEVSPPAMRRTYEVPPSALQRTYEVSPPAMRRTYEVPPTALSCTHEASIPQFSPRNPRNPPIVSKETFFDPSTTRNTRRSTFDGCFHKSRPVLQQTPNTTSSCEFSGMTIRSEGTLPPLENMPEFNFGVLSPQDPRMEQAFEGNSLADVMFVPEESTEKFDFGNLSDGFQNDVEFEAGDDFLRDMEDNPF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -