Basic Information

Gene Symbol
osa
Assembly
GCA_947579665.1
Location
OX388342.1:104699923-104735093[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-09 3.2e-05 26.9 0.0 49 89 405 442 402 442 0.91

Sequence Information

Coding Sequence
ATGCCACCTCGCCCTTCCAGTGGACAGTCTGATAGCAGTGGTCCAACAAGATCTCCAATGGCTACTCAAGGTGGCTATGGAGGCAGGGCCACCCAAGGTCAAATGGGAGCGTATGGCTATGGCTCAGGAGGTCCGCAAGGAAGTAGTCCGCAGATGAACAATATGGGAAGTTCTGGTGCAGGAGGTGCTGGAGCTGGAGGCCAGTATCCTTCTCCTGGAAGGGGAATGGCGAATCATGTACCCCAAGGCCAATACAGTGGATATCAGGGTTGGGGAAGTCCAGCAATGAACCAGGGCCCTCCTCCTGGGCTGATGAGTGGAGGGCAGATGCCTGCTGTGAAGGGAGGACCCCCTCAAGGACAGAATGTCAACTCTGTACCTGGCCCTCGGCCTCACACCCCACCTCATTACTTGAAGCAGCATTTGCAGAGCAAACTTGGCTTCAGTGGTGCATCAACAGTATCTTCCAGTCCAGGTCCTCCTCAGGGTTATAGTGGTCCAGGTGGCATAGGCTCTCCTATGGGCCCTCCACCAGGACATCCTGGAATGGGACCTCCTGGGTCTCATCCAATGGGTCCACCTCCTGTTAGTGCTCATCACCATTCAGGCATGGGCCCTCCCCCACCAGCCGGCAGTATGGTTGTTTCTGCTACCACTAGCATTCCTCCAATTTCTTCCTCGGTAGCATCATCACCCTCTCCTTCAGGCCCTCCCCATTCTGGTGCTCCATCGATGGCCAACAGCCATGATGGTCCCCAGATCAACATGCCTCCCCCTTCCTCTACTCCTAATTCCATGGCTGCTGCTGGTCATGGGGATGGACCTCACTCGATGAGCAGTGGTCAGCATCCTGAGGGAAGCCATGACAATGGCATTACTACTACTGCAACAGGCACAACTACTACAAATGTTACTCCTGCAATGCCTGGGTCAGTCACCTCTGTAATTACTACGGGCCCAGACGGTACGCCTCTGGATGAGGCATCTCAACAATCAACGCTGTCTAACGCTTCTGCTGCTTCAGGTGACGATCAAGGCTGTGGACCCAAGTCTAGGAAAGAAATGGCGGTAGGAGGATATCCTAGTCATCCGCCCACTCCTCAAAGCACTGTGCCCTCACCAGGAGCAGCTAGTATCAACTCCATGCATGGTACTGAAGAATATGGTGATGTCAATAGTCCCACTAGTTGGCCGCGTACGCCTGCCAGTCCGGTCACGAAAAACAAGACGTGGAAAGACATTGCTGGTCAGCTTGGGATCGGTGCATCTTCAAGTGCTGCCTATACGTTGAGAAAACATTACACCAAAAATCTATTGGCCTATGAGTGTCATTTTGACAGAGGAGGCATTGACCCTCAACCAATCATCAATCAAGTTGAGGCAACGTCAAAGAAAAAAGGACCCAAGTCCGCCTCTGTTCCTTCACCTGGTTCTTCAAACTCCCAGGACTCTTTCCCTACTCCTGGTTCTAGTGGTGCCTCAATGGATGGATACGGTGGGCCTGGTGGGGGCTCTTATGGATACCAACCTCCTGGACAAGGAGATTATGGTTCTCCTGCAGGAGTTGTTGGAATGGGTCCTGGCCAACAACCCTCTCCAATAAATTCAAGGGGCGGACCTCAGCAAGGTGGCCAGCCTGGACAGGGTCCTGGGGCACCTCCCTCTCCTCATCCAGGTGCTGCAGGAGCAGGGGATAATGTAAGCGTTTCGAACCCCTTCGATGATCACCTCCAACCATCCTTGGGTCGGGTGCCTCCCACACCCCCTCCACCCCAGCAGTATCCTCTCTCCCAACCTCCACCACCTCACTTTGGAAACTCCGTGCCCAACCGTTCCCCAGGTTTGCAACAAGGTTACCAAAGTCAAGGGCCATACCAACAATATCCACCCCACCAAGACCAGTACGGTCGGGGAGCACCCCCTCCCCCTCATCCAAGCGCCGTTGGGCCCATGGCGCAGGAATTTGGTCAGCAGTATTCTGGGAGGCCTATGTACCAGCCTTATGGGCCTGAAGGTGCAGAAAGGGGTTATAGCCAGCAGTCTGGAAGCAGTTCCCAGGGTTCAGGAGTGGCTGCAGTATCAGGGGTAGGTGGTGGGGGGCAGGACCCTTACAACCGCTATATGCCTGGTCCAGGTGGGCAGCCTCAGGGTTACGTTGCTCGTGCCTCAGGAGGTTATGTGGCTCCTGTGCAATCGGCTCCACCATCTGCAGGTCCTAACCAACAGCCACCTGCAGCCCCAGGCGGATATCCTGGACAGCAGGACTATTATAGACAAGAACAGGTATACCCTGGGCAGCAACCAAGTCAGCAAGGACCACAGCCCAGTGGAGGGCCTCAAAGTCAACAGAATGCAGCTCCCCCTGTAGCAGGTGCCGGCCCACCACCAACCACTTCACAGATGTATCCTGGAGCACCACCAAACAGCAAAACTATGCCTCCGCCTGCTCCACAGCCTCGAAGACATCCTGACTTTGCTAAAGAGCAGCCTCCCTATCCTCCTTATGGTCAACAGAGACCACCTGCTATGTATCCAGGGTGGTCAAATAATAGTCAGTACAGAGGGCCTTATCCGCAACCAAATGCAGGTGGGCCCCCACCACCTCCTGGTCCACAACAGTGGGGGCAAGCGCCTCCCAGACCAGCACCTGGGGTTGGACCCCCTGTACAGCAACCGCCACCTCAGCAGCAGCCTCAGCAGCCAACGAGCAATCAGTGGGACCAACACAGATATCCTCCTGGAGCACAGCCTTATCAGACCTCTCAGCAGTCACAACAGCAGCAGTGGGTGTCATCGATGCCATCCCCCGGCATTGGCCAGAGTTCTCCACTGAGGCCGCCCATGGGACCGATGAGGCCTCCGTACCGCCCAGATGCCAAGGGTTCATTCCCAATGCCACCTCCCTCTGGCCTGAAGGTCTGTTGA
Protein Sequence
MPPRPSSGQSDSSGPTRSPMATQGGYGGRATQGQMGAYGYGSGGPQGSSPQMNNMGSSGAGGAGAGGQYPSPGRGMANHVPQGQYSGYQGWGSPAMNQGPPPGLMSGGQMPAVKGGPPQGQNVNSVPGPRPHTPPHYLKQHLQSKLGFSGASTVSSSPGPPQGYSGPGGIGSPMGPPPGHPGMGPPGSHPMGPPPVSAHHHSGMGPPPPAGSMVVSATTSIPPISSSVASSPSPSGPPHSGAPSMANSHDGPQINMPPPSSTPNSMAAAGHGDGPHSMSSGQHPEGSHDNGITTTATGTTTTNVTPAMPGSVTSVITTGPDGTPLDEASQQSTLSNASAASGDDQGCGPKSRKEMAVGGYPSHPPTPQSTVPSPGAASINSMHGTEEYGDVNSPTSWPRTPASPVTKNKTWKDIAGQLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEATSKKKGPKSASVPSPGSSNSQDSFPTPGSSGASMDGYGGPGGGSYGYQPPGQGDYGSPAGVVGMGPGQQPSPINSRGGPQQGGQPGQGPGAPPSPHPGAAGAGDNVSVSNPFDDHLQPSLGRVPPTPPPPQQYPLSQPPPPHFGNSVPNRSPGLQQGYQSQGPYQQYPPHQDQYGRGAPPPPHPSAVGPMAQEFGQQYSGRPMYQPYGPEGAERGYSQQSGSSSQGSGVAAVSGVGGGGQDPYNRYMPGPGGQPQGYVARASGGYVAPVQSAPPSAGPNQQPPAAPGGYPGQQDYYRQEQVYPGQQPSQQGPQPSGGPQSQQNAAPPVAGAGPPPTTSQMYPGAPPNSKTMPPPAPQPRRHPDFAKEQPPYPPYGQQRPPAMYPGWSNNSQYRGPYPQPNAGGPPPPPGPQQWGQAPPRPAPGVGPPVQQPPPQQQPQQPTSNQWDQHRYPPGAQPYQTSQQSQQQQWVSSMPSPGIGQSSPLRPPMGPMRPPYRPDAKGSFPMPPPSGLKVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-