Basic Information

Gene Symbol
-
Assembly
GCA_947579665.1
Location
OX388346.1:18854337-18917093[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 1 9.5e+03 -0.3 0.0 21 51 30 60 20 70 0.78
2 11 0.2 1.8e+03 2.0 0.0 11 51 57 94 52 117 0.76
3 11 0.031 2.9e+02 4.6 0.0 10 51 124 162 110 185 0.74
4 11 0.023 2.1e+02 5.0 0.0 20 51 197 230 178 252 0.79
5 11 0.022 2.1e+02 5.1 0.0 20 51 265 298 242 320 0.79
6 11 0.093 8.7e+02 3.1 0.0 20 51 333 366 315 372 0.77
7 11 0.085 7.9e+02 3.2 0.0 21 51 370 400 362 422 0.73
8 11 0.094 8.8e+02 3.1 0.0 12 50 473 508 460 513 0.78
9 11 0.1 9.4e+02 3.0 0.0 13 51 508 543 504 564 0.78
10 11 0.015 1.4e+02 5.6 0.0 12 64 575 619 561 634 0.69
11 11 0.8 7.5e+03 0.1 0.1 21 56 662 702 617 717 0.62

Sequence Information

Coding Sequence
ATGGAAGAAGAGAGATTGGATGCACAGATCCTGCAGAGATACATCTGGACCAGAGAGGGAAATCAAAATACCATGAAAACAGCATCAGAACGGTTCTCAAGCATGGAAGAAGAGAGATTGGATGCACAGATGCTGCAGAGGTACATCTGGTCCAGAGAGGGAATTCAAAATACCATGAAAACAGCATCAGAACCGTTTTCAAGAATGGAAGAAGAGAGATTGGATGCAGAGATTCTGCAGAGATACATCTGGTCCAGAGGGGGAATTCAAAATACCATGAAAACAACATCAGAACGGTTCTCAAGCATGGAAGAAGAGAGATTGGATGCACAGATGCTGCAGAAATACATCTGGTCCAGAAGGGGAATTCAAAATACTATGAAAACAACATCAGAACCGTTTTCAAGAATGGAAGAAGAGAGATTGGATGCACAGATTCTGCAGAGATACATCTGGTCCAGAGGAGGAATTCAAAATACCATGAAAACAACATCAGAACGGTTCTCAAGCATGGAAGAAGAGAGTTTGGATGCACAGATGCTGCAGAGATACATCTGGTCCAGAAGGGGAAATCAAAATACCATGAAAACAACATCAGAACGGTTCTCAAGCATGGAAGAAGAGAGATTGGATGCACAGATGCTGCAGAAATACATCTGGTCCAGAGGGGGAATTCAAAATACTATGAAAACAACATCAGAACCGTTCTCAAGCATGGAAGAAGAGAGTTTGGATGCACAGATGCTGCAGAGATACATCTGGTCCAGAAGGGGAAATCAAAATACCATGAAAACAACATCAGAACGGTTCTCAAGCATGGAAGAAGAGAGATTGGATGCACAGATGCTGCAGAAATACATCTGGTCCAGAGGGGGAATTCAAAATACTATGAAAACAACATCAGAACCGTTCTCAAGCATGGAAGAAGAGAGTTTGGATGCACAGATGCTGCAGAGATACATCTGGTCCAGAAGGGGAAATCAAAATACCATGAAAACAACATCTGAACGGTTCTCAAGCATGGAAGATGAGAGATTGGATGTACATGTGCTGCAGAGATACATCTGGTCCAGAGATGGAATTCAAAATACCATGAAAACAACATCTGAACGGTTCTCAAGCATGGAAGATGAGAGATTGGATGTACATGTGCTGCAGAGATACATCTGGTCCAGAGATGGAATTCAAAATACCATGAAAACAGCATCAGAACGGTTCTCAAGCATGGAAGAAGAGAGAAACAACATCAGAACGGTTCTCAAGCATGGAAGAAGAGAGATTGGATGCACAGATGCTGCAGAGATAAATTTGGTCCAGAGGGAAGCAACATCAGAACGGTTCTCAAGCAGGGAAGAAGAGAGATTGGATGCACAGATGCTGCAGAGATACATCTGGTCCAGAGAGGGAATTCAAAATACCATGAAAACAACATCTGAACGGTTCTCAAGCATGGAAGATGAGAGATTGGATGTACATGTGCTGCAGAGATACATCTGGTCCAGAGATGGAATTCAAAATACCATGAAAACAACATCAGAACCATTCACAAGCATGGAAGAAGAGAGATTGGATGCACAGATGCTGCAGCGATACATCTGGTCCAGAGGGGGAAATCAAAATACCATGAAAGCAACATCAGAACGGTTCTCAAGCAGGGAAGAAGAGAGATTGGATGCACAGATGCTGCAGAGATACATCTGGTCCAGAGAGGGAATTCAAAATACCATGAAAACAACATCAGAACGGTTCTCAAGCATGGAAGAAGAGAGTTTGGATGCACAGATGCTGCAGAGATACATCTGGTCCAGAGGGGGAATTCAAAATACCATGAAAACAATATCAGAACGGTTTTCAAGCATGGAAGAAGAGAGAAACAACATCAGAACGGTTCTCAAGCATGGAAGAAGATGGATTGGATGCACAGAACTGCAGAGATACATCTGGTCCAGAGAGGGAATTCAAAATACCATGAAAACAACATCTGAACGGTTCTCAAGCATGGAAGAAGAGAGATTGTATGCACAGATGCTGCAGAGATACATCTGGTCCAGAGATGGAATTCAAAATACCATGAGTGGGAAGGTGGCCAGTGAGAGGCAGTGGAAAGTTCTGCAGAACTTGTTAAGGGAACATGGCCCACCTAAAAGTGTGGAACAATAG
Protein Sequence
MEEERLDAQILQRYIWTREGNQNTMKTASERFSSMEEERLDAQMLQRYIWSREGIQNTMKTASEPFSRMEEERLDAEILQRYIWSRGGIQNTMKTTSERFSSMEEERLDAQMLQKYIWSRRGIQNTMKTTSEPFSRMEEERLDAQILQRYIWSRGGIQNTMKTTSERFSSMEEESLDAQMLQRYIWSRRGNQNTMKTTSERFSSMEEERLDAQMLQKYIWSRGGIQNTMKTTSEPFSSMEEESLDAQMLQRYIWSRRGNQNTMKTTSERFSSMEEERLDAQMLQKYIWSRGGIQNTMKTTSEPFSSMEEESLDAQMLQRYIWSRRGNQNTMKTTSERFSSMEDERLDVHVLQRYIWSRDGIQNTMKTTSERFSSMEDERLDVHVLQRYIWSRDGIQNTMKTASERFSSMEEERNNIRTVLKHGRREIGCTDAAEINLVQREATSERFSSREEERLDAQMLQRYIWSREGIQNTMKTTSERFSSMEDERLDVHVLQRYIWSRDGIQNTMKTTSEPFTSMEEERLDAQMLQRYIWSRGGNQNTMKATSERFSSREEERLDAQMLQRYIWSREGIQNTMKTTSERFSSMEEESLDAQMLQRYIWSRGGIQNTMKTISERFSSMEEERNNIRTVLKHGRRWIGCTELQRYIWSREGIQNTMKTTSERFSSMEEERLYAQMLQRYIWSRDGIQNTMSGKVASERQWKVLQNLLREHGPPKSVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-