Basic Information

Gene Symbol
ARID5B
Assembly
GCA_947579665.1
Location
OX388344.1:39905224-39924974[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-26 9.8e-23 83.0 0.0 2 89 215 300 214 300 0.95

Sequence Information

Coding Sequence
ATGAAGGAAGATAAATGTGAAATCGATGTTTCAAAGAAATGGAAAGGTCATGGGAATGTGGTCATACTGAGCTATGCTCGTTATTGTCGCTACCGAGCCGTCCTGAAACGTCTTCAGGGGTTCAGATTACCAAAGGATGGATCACCAAGTCCCAGTTGGCTCCGTGGAGCGTTAGCTGTTGCTCTTGGTGGATTTCCTGTTTCTGAGCCTGATACACATGTTCTCTTCTGCAAGGACACATTTGATTATCCAGACCTTGAAGGACATGAACTCCTATGTAATCACCTAGCTCCAAATTTAAAAGGAAGAAGACGTAGAAAGAGAAAAAAGAGAAGTCCTTCTCCAGAATCGGAGTCAAATGAGTCAGAGTCGTCGCTGTCAACGTATTCATCTGCAGCAAAGAACAAATTTGGCTCTGGAGTTGGTTCTTCAGTCAACCGGGACGGTATTCGAGCAGGCCGGAGACTGGCACCCCCACCAAGAGGAAGGCGGAGGCGTCCAGGAGGTTCAAATACTCCAATTGTGCCAACGGGCTCTCAGCGCCCACCTTCTTCATCTTCTGCTTCATCCTCTCCCCCTCCTCATCAACATACAAACCCCTCTTCCCCTGATAACGGAATTGGAATTGGTCGCAGTGATGACGAGAGACGCTTCCTCACCCATCTTCACAATTTCATGAAACATAGGGGTTCACCAATAGAGCGCCTTCCCCATCTCGGATTCAAGAAAATTGATCTTTTTGAATTCTATGGAAAAGTACAAAGTTCAGGAGGCTATGAGAAAGTTACTGGGCGAAAATTGTGGAAGCACATTTATGATGAACTTGGAGGTCACCAAGGGAACACAAGTGCGGCCACTTGCACTAGACGCCATTATGAAAAACTACTACTTCCCTATGAGCGCAAGGTGAGAGGCCAGGAAGACAAACCTCCTCCCTCTAGTCATAGGAAGAACAGCAAAGCTGAAGGAGAGGCAGGAGATACAAGTAATGAAGGCAGTTCGAGTGCTGAAGGTCCACCACCTTCAAGAGGACATAGAAAGGCTGATGCTGATTCGGACCAACAGCGGAGAAGTGTTACTGTGCATTCAACTACTGTCCGAGAGACTGTGGAAGTTGGAGCTTCTATGATCACAACCATGATGACTTCAAGTACAAGTACAACTAATGGTGCAGCAGTGCCTCGAGACAAGGAAAATATAGTTCCAAGACCAAATGGAGGGTTGAGGTTAGAAGGAAGGGATGGTGCTGTTCCTCCTCCACCAGAATTAGTACCACTACCTACAACTGGCCATGCAGCATTGCGTGATCTTGCAAGAAGAGCAGCTGCAGCATCATCATCTGGTCGCACATTACCCACATCACATCCTTATCCCTCAACAATGCCAACTCGAACAGCATCTTACGCAGCTGCAACATCCCTCAGAATTCCAGTCGTGCCATCTCTGAAAAGACGAAAGTTAGAAATACTGAGGGAAGGAGGACTAGAGGTCACCCCAATTCCAGCTCCTTCATTCCCTCCCCCTCCATCTGTTCCATCGCGAAGTTCTTCAGGGCGTCCCTCAGTCATACATCATGCATCACCTCCATCTCCTCATTTGCCCATGAGGGAAGGAATGAGTCTTCCTTCCTCTCAGGTCTCCATCACCGTCACCCCGGATCTCAACCACATAATTGGCAACTCTGATGCCATGGTGAGAGGGACAATATCGACAATCCATCAAACACAGCATATCAGTCTTGAAGGTGGCCCATCACCAACAGGTCTCCCACGTGTCACCCAATCCCGTTCCATTTATGCTCGTTCTGAAACAGTTTATGGAAATCCCCAAGAAGGCTTGCACCTTCCAAACAGGACATGTGTTCCCATTCACCCAGGGCCATCTGGGATCGAGGTCCTTGACCTCACTACAAAAACACGACCAGGAACACCTACAAACACAACCGCAACAGTTGTTTCAGATGACGATGATGTGATAGAAATAGATAGGGTGTGTGGCCCAGATCTTTCCCAGAGGTCTACGGACATGAGAAGAAGAAGGCCAAAAGGAGTAGGTTCTGGTCTGGAGATAACCATTGTTGAGGGTTACGAGAATGTCTCCGATTCTAGAAATGCGCGCCGGCCTGCCCCGGGAAGGCGGAAATCTGACGAGATTCTCAACGGAGCTCATTCAGGTCTTGTTGTTCCCCTACCTGGAAGGTCGAGTGTAGGCCATGGGATTCATCAGTCTTCACCCCTTTTCATGAATTATCCTGCTCTTGCGGGGAATCATCCACCATCTTCCGAAGCAGATCCCCTATATGGGCCTCTCCTGGACCAAGCAGCTGCAGCATTCTGCTCAGCCATCTATGGAGTAGGATCAGGGGTTCCAACCTCACTGCCCCATCCTACCTCAATCCATCGTTCACACCTTAGCACCTCATCCTCTATACCTTCCTCATCATCCCAGCTCCGTCCATCAAGCACAGTGGCACAGAGGCAGATGCAGCTGTACAAAGAGGTTCTTGCAGGAAGTGGCATGAATGGTATGGTGTCTTCACTATCAGCCGCTGGCTATGGGAGTCGATCAGGACTTGCTGGTGATGGTTCGGCTTCAGTCACCCCATTGCTGGCTCATCTTTCTCCTCATCCTAGGGCCACACCGACATCTAACCATGAACTTCATCGGGAATACGATGGATGCGAGCGGCTCTGTAGCGTTACGCTCGTTGCAGGGCCATCGGTACGTCTGCATGCGTGCCCACAGCCGGCCGACTTGACGCTGCTGCCACCTCTACCATCCCCTCCCCCCTTCGACCCCAGCACGGTGCCCTCCACGCTACGCTTGGCACCGCCGCCCCGAACCGAAGAAGGGGAGAGGGAGAAAGTGAGGACGACTCGGCGGGCCGTACCGAATCCACACGCTCGCTTGGGGTTCACAACGCCGAGGCAAGTTCTTCCGAACTGCTTCTTGGGCATCGACGACGAATCCAACATTCCGGCGGAAGGGGGAAAAGGCGGAGAAAAAAAGCAAGCGATGATGCTCTCTGAGTGGCCGTCGCCCGGATTTTTAGGGAAGCGTCACCGTTCAATTACATTGTGCCCGTAA
Protein Sequence
MKEDKCEIDVSKKWKGHGNVVILSYARYCRYRAVLKRLQGFRLPKDGSPSPSWLRGALAVALGGFPVSEPDTHVLFCKDTFDYPDLEGHELLCNHLAPNLKGRRRRKRKKRSPSPESESNESESSLSTYSSAAKNKFGSGVGSSVNRDGIRAGRRLAPPPRGRRRRPGGSNTPIVPTGSQRPPSSSSASSSPPPHQHTNPSSPDNGIGIGRSDDERRFLTHLHNFMKHRGSPIERLPHLGFKKIDLFEFYGKVQSSGGYEKVTGRKLWKHIYDELGGHQGNTSAATCTRRHYEKLLLPYERKVRGQEDKPPPSSHRKNSKAEGEAGDTSNEGSSSAEGPPPSRGHRKADADSDQQRRSVTVHSTTVRETVEVGASMITTMMTSSTSTTNGAAVPRDKENIVPRPNGGLRLEGRDGAVPPPPELVPLPTTGHAALRDLARRAAAASSSGRTLPTSHPYPSTMPTRTASYAAATSLRIPVVPSLKRRKLEILREGGLEVTPIPAPSFPPPPSVPSRSSSGRPSVIHHASPPSPHLPMREGMSLPSSQVSITVTPDLNHIIGNSDAMVRGTISTIHQTQHISLEGGPSPTGLPRVTQSRSIYARSETVYGNPQEGLHLPNRTCVPIHPGPSGIEVLDLTTKTRPGTPTNTTATVVSDDDDVIEIDRVCGPDLSQRSTDMRRRRPKGVGSGLEITIVEGYENVSDSRNARRPAPGRRKSDEILNGAHSGLVVPLPGRSSVGHGIHQSSPLFMNYPALAGNHPPSSEADPLYGPLLDQAAAAFCSAIYGVGSGVPTSLPHPTSIHRSHLSTSSSIPSSSSQLRPSSTVAQRQMQLYKEVLAGSGMNGMVSSLSAAGYGSRSGLAGDGSASVTPLLAHLSPHPRATPTSNHELHREYDGCERLCSVTLVAGPSVRLHACPQPADLTLLPPLPSPPPFDPSTVPSTLRLAPPPRTEEGEREKVRTTRRAVPNPHARLGFTTPRQVLPNCFLGIDDESNIPAEGGKGGEKKQAMMLSEWPSPGFLGKRHRSITLCP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01131345;
80% Identity
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