Snob019500.1
Basic Information
- Insect
- Symmerus nobilis
- Gene Symbol
- stc
- Assembly
- GCA_027564815.1
- Location
- JANTOP010005662.1:6726-15610[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 1.9e+04 -5.0 3.4 15 19 367 371 366 374 0.57 2 14 0.32 3.1e+03 -1.6 0.2 4 10 400 406 399 406 0.92 3 14 4.4e-05 0.42 10.8 16.7 3 19 413 429 402 429 0.83 4 14 5.5e-06 0.053 13.7 13.3 1 18 465 482 465 483 0.97 5 14 0.00014 1.3 9.2 11.9 3 19 525 541 523 541 0.91 6 14 9.5e-05 0.91 9.7 13.5 4 18 589 603 582 604 0.87 7 14 0.0067 64 3.8 9.3 1 11 644 654 644 655 0.96 8 14 1.2 1.2e+04 -3.4 0.8 4 10 659 665 658 665 0.72 9 14 4.8e-10 4.6e-06 26.6 14.1 1 18 671 688 671 689 0.97 10 14 1.3 1.3e+04 -3.6 0.6 6 10 718 722 717 723 0.68 11 14 2 1.9e+04 -6.6 12.5 7 18 733 745 725 746 0.80 12 14 2e-09 1.9e-05 24.7 9.7 1 18 782 803 782 808 0.92 13 14 1.9e-06 0.018 15.2 10.9 1 16 814 828 814 833 0.91 14 14 0.22 2.1e+03 -1.1 1.1 7 12 848 853 842 853 0.70
Sequence Information
- Coding Sequence
- ATGGATCAATTTAATGATCAAAATCCGTTGTATGGCGCTAACAGTTCCAGTGGATCCTTCAATTCGAACGAAAAGTACATAGATTTTAATGAATTCCTAACGGCATACAATCAACAACCAAATAATGGTAACGGTTCCACTTATCCGTATAACTATGAACCATTTCTGGAATACCGTTCCCTGTTTCCCTACTATCCGTCACCAATGGAATACTTCAATGACGGTCTGATTAAACAATCGAATTTAATACCGACCGCTAACGAATTTATACCGATGAGTCGTCATCAACCGTTCCCGGAACCCGTTGATTTTTATAGTGATCCATTTGTTGGGCAAGCGATCCAACCGATTGTCGACTATCCAATGACCGATAATCGAAATGTAAATGAAATGTTTGGTTTGGTTGAATCCGTATCGAGAATCGGAGTCGATGAGAATAAAACCGAACGGCCGGAAGAAGACCCCAAACCCGTCGAATCCATTTTAAATATTAGTGGAGCGGTAAAGAAACCGACGGGAAATGAATCGATCCAAAAGTATTCGGGAAAAGAACGTTATGAAAATGATGGGTCCTCAACGGAACGGCTTACGAAACAATCAACACGGCACGGCAATCAACGGAATGGAAACTATGAGAACGGTGATCGAAATCGTTGGGCTCGGGATCGTAAAAATTACCGAGACTCCGGATATCGGTCCCATTATGACGATGGACCGGACACAAATTGGCGGACAGATTTCTCTGATCGGCGATCACATTTTGGACGGTACGATGTGAATGGGGGACGAGATGAATCGAATGGTCGGTCGGGTGGTGGCCGGAAAAAGAATAACGGTTCGGAGAAGTATAGCCATCCCGATTATAAACCGAATCGGAATTTAAAGGTGACCGCTTACAATGAGAAGACGAATGCTGGCTGCTCGCAACGCGAGAAATTAATCATGGAAATTGATTCGGGGAGATTGGAATGTATGGTGTGTTGTGAAGGTATTAAGCCATTCCAACCAACGTGGTCCTGTTCCAATTGTTATGCCATTATGCATTTAAATTGCGTCATCAAATGGTATTCCAGTTCAAAATCGGACGAAGGTTGGCGTTGTCCGGCCTGTCAAAACTGTACAAAGCGTACGCCGACCGATTACTACTGTTTCTGTGGCAAACAAAAGAATCCCCAATACAATCGAAACGATGTGGCGCACAGTTGCGGTGACATATGTGGCCGTAAAGATCTATGTATGCATCCGTGCACATTGTTGTGTCATCCGGGACCGTGTCCTGCATGTCAAGCGACCGTGCAACGAGAATGCGGTTGTGGTCGAATGAAGAAAATCATGCAGTGTTGTCAGAAGGAGCCGATCACATGTACGGAACGTTGTGATAAGTTGTTACAATGCGGTGCGCATCGGTGTGAGGAGAAATGTCATCCGGATGAATGTGGTGATTGTGAGCGTCGCATCGATCATAAATGTTACTGTGGTAAAGATAAGAAAGACATGGAATGTACGAAGGTGAATAACGAAACCATAAGATATTCGTGCGGTAAAACTTGTAATCGACAATTGTCCTGTAAACATCATTCGTGTCGGATGATTTGTCATGACGGTGACTGTGGACTGTGTAAATTGTTACCGGATCAGGTGACGTCTTGTCCATGCGGTAAAACACCCATTCCCCAGGAGCAACGTAAACAATGCTCAGATCCAGTCCCGTTATGTACGAGTGTATGCGGTAAACCGTTGAAATGCGGTCCACCCAGTAATCCACATCGTTGTACCGGAAAATGTCATAACGGTAATTGTTTACCTTGCAACAAAGATACAGCCGTCCGATGTCGTTGCGGCCACATGGATCAAATGGTTAAATGTCGTCAACTTTTGACTCGGGCCGATGATGCTCGTTGCAAGAAACGTTGCACAAAGAAACGTAATTGCGGTAAACACAAATGTAATCAGGAATGTTGCATTGACATTGATCACGTGTGTCCGTTACCATGCAACTATAACTTATCTTGCGGTAAACATAAATGTGATCAAACGTGTCATAAGGGTCGATGCCAACCGTGTTATCGTAGCTCATTCGAAGAATTGTACTGTGAGTGTGGAGCGAATGTTATCTATCCACCGGTTGCTTGCGGCACAAAACGTCCAGCGTGCGATAAACCGTGTTCCCGGCAACACGGTTGTACCCATCCCGTACAACATCCATGCCATTCGGCACCCAATTGCCCCCCATGCATGGCATTCACCGCGAAATATTGTCACGGTCGTCACGAGCAACGGAAAACGATACCGTGCAGTCAAGCGGATTTTAGTTGTGGCTTACCGTGTGGCCGTCCGCTTAAATGTGGCCGACACAAGTGTATCCGATTGTGTCATTCAGGGGATTGTGATCGACCGGATGAACCGTGCAAGCAGCCGTGTCAACGTAGCCGGGTAATGTGCGGGCATCCATGTAATTCGGTGTGTCATGTGGGCGATTGTCCTGATACACTGTGCCGTGAGAACGTTGAAGTGTTGTGTGAATGCGGTAATCGGAAACAGCAGAGGACGTGTCATGAATTTGCAACGGATTATCGTCGGATTGCGACAGCTAAATTAGCGTCTAGTATGCAGGATATGCAACGCGGTAATTCAATTGAATTGTCCGATGTTTTGGGGCCAATTAAATTGTCAAACAATAAAACGTTGGATTGTAACGAGGAATGTAAATTGGTGGAACGTAATCGTAAATTAGCGATTGGCTTACAGATTCGAAATCCCGATCTATCATCAAAATTACAACCGAAATATACTGACTTTGTGAAGGGTTGGGCGAAGAAGGATCCACAATTGGTACAGATGATCCATGATAAATTATCGGAATTGGTGAAATTGGCAAAGGAAAGTAAACAACGGTCACGCAGTCATTCATTTCCGACAATGAATCGTGAAAAGCGTCAGTTGGTACACGAGATGTGTGCAATGTTCGGTGTTGAATCGGTTGCATACGATGCGGAACCGAATCGTAATGTGGTGGCGAATGCAACCAAAGAGACATCTTGGTTGCCTAGTATGAGTATTATGGAAGTGTTGCAACGAGAAAGTGGAGTACGACGAATACCAGTGCCTAGTAATAATGCTTGGGGTATGAAGCGTTAA
- Protein Sequence
- MDQFNDQNPLYGANSSSGSFNSNEKYIDFNEFLTAYNQQPNNGNGSTYPYNYEPFLEYRSLFPYYPSPMEYFNDGLIKQSNLIPTANEFIPMSRHQPFPEPVDFYSDPFVGQAIQPIVDYPMTDNRNVNEMFGLVESVSRIGVDENKTERPEEDPKPVESILNISGAVKKPTGNESIQKYSGKERYENDGSSTERLTKQSTRHGNQRNGNYENGDRNRWARDRKNYRDSGYRSHYDDGPDTNWRTDFSDRRSHFGRYDVNGGRDESNGRSGGGRKKNNGSEKYSHPDYKPNRNLKVTAYNEKTNAGCSQREKLIMEIDSGRLECMVCCEGIKPFQPTWSCSNCYAIMHLNCVIKWYSSSKSDEGWRCPACQNCTKRTPTDYYCFCGKQKNPQYNRNDVAHSCGDICGRKDLCMHPCTLLCHPGPCPACQATVQRECGCGRMKKIMQCCQKEPITCTERCDKLLQCGAHRCEEKCHPDECGDCERRIDHKCYCGKDKKDMECTKVNNETIRYSCGKTCNRQLSCKHHSCRMICHDGDCGLCKLLPDQVTSCPCGKTPIPQEQRKQCSDPVPLCTSVCGKPLKCGPPSNPHRCTGKCHNGNCLPCNKDTAVRCRCGHMDQMVKCRQLLTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHVCPLPCNYNLSCGKHKCDQTCHKGRCQPCYRSSFEELYCECGANVIYPPVACGTKRPACDKPCSRQHGCTHPVQHPCHSAPNCPPCMAFTAKYCHGRHEQRKTIPCSQADFSCGLPCGRPLKCGRHKCIRLCHSGDCDRPDEPCKQPCQRSRVMCGHPCNSVCHVGDCPDTLCRENVEVLCECGNRKQQRTCHEFATDYRRIATAKLASSMQDMQRGNSIELSDVLGPIKLSNNKTLDCNEECKLVERNRKLAIGLQIRNPDLSSKLQPKYTDFVKGWAKKDPQLVQMIHDKLSELVKLAKESKQRSRSHSFPTMNREKRQLVHEMCAMFGVESVAYDAEPNRNVVANATKETSWLPSMSIMEVLQRESGVRRIPVPSNNAWGMKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -