Snob015792.1
Basic Information
- Insect
- Symmerus nobilis
- Gene Symbol
- nfxl1
- Assembly
- GCA_027564815.1
- Location
- JANTOP010027448.1:7531-10927[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.65 6.3e+03 -2.6 1.5 14 19 190 195 190 195 0.86 2 22 0.89 8.5e+03 -3.0 2.6 1 4 228 231 226 235 0.68 3 22 1.6e-08 0.00016 21.8 18.4 1 19 240 257 240 257 0.99 4 22 0.78 7.5e+03 -2.8 2.8 5 10 282 287 282 287 0.94 5 22 0.00023 2.2 8.5 13.6 1 18 293 311 293 312 0.95 6 22 0.86 8.2e+03 -2.9 1.2 6 10 337 341 336 341 0.90 7 22 1.7e-06 0.016 15.3 12.3 3 19 349 365 347 365 0.93 8 22 0.11 1e+03 -0.1 0.6 6 12 390 396 389 396 0.89 9 22 5e-08 0.00049 20.2 10.7 1 18 400 417 400 418 0.97 10 22 0.084 8.1e+02 0.3 0.4 1 5 427 431 427 436 0.94 11 22 2 1.9e+04 -5.0 2.3 5 10 441 446 441 446 0.91 12 22 0.26 2.5e+03 -1.3 13.8 3 18 454 470 452 471 0.88 13 22 3.4e-10 3.3e-06 27.1 13.0 1 19 480 498 480 498 0.98 14 22 1.6 1.6e+04 -3.8 1.2 5 10 526 531 526 531 0.83 15 22 2 1.9e+04 -8.0 15.5 7 18 542 553 537 554 0.80 16 22 0.011 1e+02 3.2 5.3 3 12 567 576 566 576 0.91 17 22 2e-05 0.19 11.9 6.9 1 12 647 658 647 658 0.97 18 22 2 1.9e+04 -5.9 3.8 5 10 673 678 671 678 0.81 19 22 0.004 39 4.5 12.6 4 18 688 702 686 703 0.92 20 22 2 1.9e+04 -4.9 2.7 9 11 709 711 707 713 0.56 21 22 1.3e-05 0.13 12.4 15.1 1 16 753 767 753 773 0.92 22 22 0.79 7.6e+03 -2.8 1.4 6 10 802 806 801 806 0.90
Sequence Information
- Coding Sequence
- ATGTCAAAAAAGGGGGAATCCTTCGATCCGTTGAAGAAACCTGGCGGGAAAAAATTGGGTAGCAAAATAAACATTCCAGTCGATCGATCGAAAACGATCGGTTTACCGACTCCGCAGCCGGTAAATAATTTCAATGCCGAAAAGGAGTTCCAAGCAATCCGTCGGAAAGATTTGGTATCCGGTCAGAAACATTTAGATAATTACGCAAGCAGTTCGGACGACGACGATGACGTTTCCGTTGATTTTATCGCGGAAAGAAAATCAATGGTCGGGAATATATTCAAGGGATACGATGGAGATCGATCGGAACTAATAAAAACCCAACAGTTTCTAGAGAATCTATTTGAATCTAGCGCTGCGACTTGCGTTATTTGCATAGCCACCGTTCGGACAAGTCATCCGATTTGGTCCTGTGGAAGTTGTTTTACATTTTTCCATCTCGGATGCATCCAACGGTGGGCTAACGACAGTACGTCCCAAAAGAAATTGAACCAAACCGATGTGACCGGTTACTACACGAATCAGGGTGTTTACGTTCCACCAAAGAAAGATTCCATCATCAAATGGGACTGTCCAAATTGTCGAACGGAATATTTAATCGATGATATTCCTCGTGATTATAAATGTTTCTGTGGCAAGGAGGTGAATCCGGAACGTTCTCAATGGACGATGCCACATTCATGTGGACAACATTGTGAGAAACCGTTGAAACCGTACTGCGGTCATAAATGTAAATTACTGTGTCATCCGGGACCGTGTCCCCCTTGTCCCCAATACATCCAATCGAATTGTTTATGTAAACAGTCACCGGTTAAAATGGTTCGGTGTTCGCAGAAAGATTGGAAGTGCCAACAGAAATGTAAACAAATGTTGGCGTGCGGTATCCATTTATGTGGGCAATTATGTCATCCGGTTGATCAGTGTCCACCGTGCGGACGGCGAAGTAAACAGAAATGTTTGTGTGGCGGTGCACAACAGGAACGATTTTGTACCGATCTTGTATGGCAATGTGAACGAATTTGCAACAAACAGTATTCATGTAAATTACATAAATGTGAACTTCGATGTCATGAAGGTGATTGCGGGGAATGTCCGTTAGGTTTACCACGATCATGTCCGTGTGGAAAGCGAAAATCCCAAGCCAAATGTTCGGAAGATGTTGGTTTATGTGGCGATACATGTCATAAAATGCTTCCGTGCGGGGTACATTTATGTGCCGAACGATGTCATAAGGGTGAATGTAGCCCGTGTCTTGAGATGATTGAAAAGAAATGTCGTTGCGGTCAGCACACCAAACTCTATCCATGCTCCCGACCATTCACCTGCGAAACGAAATGCAAGCAGATGCGTGACTGCAAAAAGCATCCTTGCAATCGGAAGTGTTGTAACGGATCGGACTGTTTACCATGCGATAAAATCTGTTCGAAAGTGTTATCATGCGGTAAACATAAGTGTACGTCCCTGTGTCATCGGGGTCCATGTTATCCGTGCCGGGAACGGGCTACTGTAAAATGTCGTTGTGGCCAGACAACAATAACCGTTCCGTGTGGCCGGGAGAAACGTACCAATCCGCCCAAATGTCTTCAGCCCTGCAAAATCCCATCGAGATGTCATCACACAAATCCACATCGATGCCATTCATCCAAATGTCCAACATGCCATCAAATCTGTAACCTACCAAATGATACAACGAATTGTAATCATTTATGTTCGAAATTATGTCATGATGCTGTTGATGTAACGATTGTTGATAAGAATTTTGTACCGGCCGGTCCATGGGAACGGCCGTCAATACGATCGGAAGTTAAGAAGCTACCACATCCACCGTGTGACGTGAAGGTCCCCGTTACGTGTGTTGGGGGTCATGAAACGGTAGATTGGCCTTGTTGGGATTCGGTTCCACGTAATTGTGGTCGACAATGTGGTCGTCAATTGAAATGTGGCAATCATACATGCGAATTGGAATGTCATTCCGTTCAGGATTTAACATCGTTAAAGGCGGAACCATCTTGTTCCGAATGTAATGAAACCTGTTCTAGAAAACGTCCATCCGGTTGTCTTCATTCATGTCAAAGAGAATGCCATCCGGATCCATGCAAATTGTGTGAGGCTATCTTGAAGGGACCATGTCATTGCGGTATGACAACTGTCTACTATAAATGTAATCTTTTCAATTCCGGTAACGACGAGGAAGAGTTAAGAGTTATTCGTACGAAATTGATGAGTTGTGGAAATCGTTGCATTAAAAATTATGATTGCGGACATCAATGCATCGAAAAATGTCATCCAGGTGAATGTCCGAACCCGAAAGGTTGTAAGAAAAAGGTCAAAATTTACTGTAAATGTAAAATGCGTAAAATGGATGTAACCTGTGATCGTATCCGATCCGGATTCACAATTGAATGTGAGGAGATTTGTAAGAAAAAATTAGCTGAAATGGAAGCGGTGGCTGAGGAGGCAAAACGTAAACAGGAGGCGGAAGAGGAGGAGAAAAATCGCCGGGAATTGGAGGAGTTTGAAAGGAAATTCGGGCCAAAGAAGCATAAGGAACGGAAAAGAAATGTGGAGGAGCTAGAAGAAACGGATAAGTTAATTTACTGGTTAATCGGATTCGGGATTTTGACAGTTTTATTTGGATTTTTTATTTATTTTTTTCTTTTATAA
- Protein Sequence
- MSKKGESFDPLKKPGGKKLGSKINIPVDRSKTIGLPTPQPVNNFNAEKEFQAIRRKDLVSGQKHLDNYASSSDDDDDVSVDFIAERKSMVGNIFKGYDGDRSELIKTQQFLENLFESSAATCVICIATVRTSHPIWSCGSCFTFFHLGCIQRWANDSTSQKKLNQTDVTGYYTNQGVYVPPKKDSIIKWDCPNCRTEYLIDDIPRDYKCFCGKEVNPERSQWTMPHSCGQHCEKPLKPYCGHKCKLLCHPGPCPPCPQYIQSNCLCKQSPVKMVRCSQKDWKCQQKCKQMLACGIHLCGQLCHPVDQCPPCGRRSKQKCLCGGAQQERFCTDLVWQCERICNKQYSCKLHKCELRCHEGDCGECPLGLPRSCPCGKRKSQAKCSEDVGLCGDTCHKMLPCGVHLCAERCHKGECSPCLEMIEKKCRCGQHTKLYPCSRPFTCETKCKQMRDCKKHPCNRKCCNGSDCLPCDKICSKVLSCGKHKCTSLCHRGPCYPCRERATVKCRCGQTTITVPCGREKRTNPPKCLQPCKIPSRCHHTNPHRCHSSKCPTCHQICNLPNDTTNCNHLCSKLCHDAVDVTIVDKNFVPAGPWERPSIRSEVKKLPHPPCDVKVPVTCVGGHETVDWPCWDSVPRNCGRQCGRQLKCGNHTCELECHSVQDLTSLKAEPSCSECNETCSRKRPSGCLHSCQRECHPDPCKLCEAILKGPCHCGMTTVYYKCNLFNSGNDEEELRVIRTKLMSCGNRCIKNYDCGHQCIEKCHPGECPNPKGCKKKVKIYCKCKMRKMDVTCDRIRSGFTIECEEICKKKLAEMEAVAEEAKRKQEAEEEEKNRRELEEFERKFGPKKHKERKRNVEELEETDKLIYWLIGFGILTVLFGFFIYFFLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -