Snob011633.1
Basic Information
- Insect
- Symmerus nobilis
- Gene Symbol
- pnr
- Assembly
- GCA_027564815.1
- Location
- JANTOP010011529.1:9273-10976[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-18 9.2e-15 54.0 2.6 1 34 140 172 140 174 0.97 2 2 6.7e-19 2.1e-15 56.1 6.2 1 35 194 227 194 228 0.98
Sequence Information
- Coding Sequence
- ATGTTTCACACACCATCCGCCTATTCAAGTGTGACGACTTCTAATCGGCCAACTAGTCcagcaacagcggcagctgttgcatccgcctaccaccaccaccatcaccatcatcaccaaccaccggtaacagcaAATTCGCCTGTTTATGTTCCTTCAATAAATCGTACTATGTCTCATCATGCGGGCCAATATCATCAGCCAACTACTCATCATCCATTTGCTGGCACGCAAAATGGTTGGTCGACAACGAGTACGGATTTTAATGCGGCTGCTGCTGCCGCGGCAGCCGCTGCCCACAATCAATTTTATCCACAAAATGTTATAATGGGTTCATGGCGAACGTACGATCCCAGACATTTTCAAAGCACATCACCTTATGACAGTGCAATGGATTTTCAATTTGGTGAAGGTCGAGAGTGTGTTAATTGTGGAGCGATATCAACACCGTTGTGGCGACGAGATGGTACCGGTCATTATTTGTGCAATGCGTGTGGACTTTATCATAAAATGAATGGAATTAATCGACCATTGATTAAACCAAGTAAAAGACTGACCGCAACAAGACGATTAGGTTTATGTTGCACTAATTGTGGTACACGAACGACGACATTGTGGCGTCGAAACAATGAAGGGGAACCAGTTTGTAATGCTTGTGGTCTCTACTTTAAATTACATGGCGTAAATCGACCGTTAGCTATGCGAAAAGATGGTATTCAGACGCGCAAACGTAAACCGAAAAAAGGTGGTAGTTCAACGGACTTATCAAACGATATGTACGGAAATAGTAAAATAAAGAAAGATGATGAAATATCAAACAATGATCATAATCATAATCATAATCATCATCATCCAATCTATCATGAACACAACATATCGCCCAGTATTACGTCCCCATCGTCGGCTTTGCATTTAATGAGCGGCGACCGGTCGGCTTTACTCCCATCAAAAGAATTATCAACCATTGATGGAGCAAGTAAGATATCGAGTCACCACTCGCTTTCATTACCACCAATCCCGCTGCCAATATCTTCATCTTCGAATGGTTTACGACCGATGATTAACCGAAGTAATTTATCGCATCTTCACCATACACCATTACAGCCATATTCATCGGCAAGCACAACTCTTAGTAGTGGTAGCAATAATCCCGGCCATCAATCGGTACCATCAACAACTACAACCCCAACTTCGTCATACGGAAATCACCTGAGCAGTTGCCCGTCGGCGAGGAAATATGATATGCCAACCATTTACAATCATCATCATCCGCATCATCATTCACCGCATACAGCAAATAGATCAAATGGTTATCATCAAGACAGCATAGGATCACACTGTAGTGATCGAATGACATCTAGTACCGGTACCGATGCTGAAACAATCGCTAGTACCGGTTCATCGGGAGGCGTGAAATCTGAATCAGATTTAAACGGATATGATTACATGGCGAACTGTCTTCAATTACAAAACAGCTATTTTGGTGGTTCACCTTATTTATCGGCTACCAACAATGGTAATCTCCATCATAATCCAGCTGTGGCGGCCGCCGTTGCAGCAACAGCCGATTTAGCAACATCGGTCGGTTATCACCATCAACATAATGTTATACAGGCCGCCAAGTTAATGGCAACTTCTTGA
- Protein Sequence
- MFHTPSAYSSVTTSNRPTSPATAAAVASAYHHHHHHHHQPPVTANSPVYVPSINRTMSHHAGQYHQPTTHHPFAGTQNGWSTTSTDFNAAAAAAAAAAHNQFYPQNVIMGSWRTYDPRHFQSTSPYDSAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKGGSSTDLSNDMYGNSKIKKDDEISNNDHNHNHNHHHPIYHEHNISPSITSPSSALHLMSGDRSALLPSKELSTIDGASKISSHHSLSLPPIPLPISSSSNGLRPMINRSNLSHLHHTPLQPYSSASTTLSSGSNNPGHQSVPSTTTTPTSSYGNHLSSCPSARKYDMPTIYNHHHPHHHSPHTANRSNGYHQDSIGSHCSDRMTSSTGTDAETIASTGSSGGVKSESDLNGYDYMANCLQLQNSYFGGSPYLSATNNGNLHHNPAVAAAVAATADLATSVGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -