Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.052 2e+02 2.3 0.1 23 29 13 19 11 19 0.86

2 4 8e-18 3.1e-14 52.8 5.7 1 29 53 81 53 81 0.97

3 4 2.9 1.1e+04 -3.3 4.6 16 25 114 123 109 123 0.73

4 4 2.2 8.5e+03 -3.0 0.5 18 24 156 162 154 163 0.68

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.052	2e+02	2.3	0.1	23	29	13	19	11	19	0.86
2	4	8e-18	3.1e-14	52.8	5.7	1	29	53	81	53	81	0.97
3	4	2.9	1.1e+04	-3.3	4.6	16	25	114	123	109	123	0.73
4	4	2.2	8.5e+03	-3.0	0.5	18	24	156	162	154	163	0.68

Coding Sequence: ATGAAAAAGATCGATAAACGTCGGGAAATTTCGGGTGCATCCGGTTGCCCAATTGCAAACCGTAATAAGCTACGTGCACTAGAAATCGATAGCGCCGTAGAAAAGCAGCGGGCCTATGTGGCTAATATTCCAGCATCAATTAAAATTGACGGTGTGAACTGTCCGACGATTGGTTGTGATGGTACCGGTCATATAAATGGAACATATTTAACTCATCGATCATTATCTGGTTGCCCAACGGCTCAAGGTGTCAAAAGAACAAAGTACGATGAAGATATAATGTTGGGTTCTTCAAATATGTCGGATGAAATGGAACAAGCTCAACACAATCATTCTCATTCAACAACCACGCATCATTCGATCAAGGGTTCTCATTCAAACATTAGTAATAATAATAATATAGATATTACGTCATGTAACAGTATGTCGCCGGCCAGTACCACTAATGGTACTTCAGCGGTTGTCACTCATCACCATCAATTGCAATCCCCATTACTACCACCTCAGCCCGATGTAACTGATTTACAACGTGAAAAAGCTCAGGTGGAACTGCAAATGTTGCGATTGAAATCGAATATAAATGCAATTGAATTCCAACTAAACCATAATGAAAGGGTGAGTTGTTAG
Protein Sequence: MKKIDKRREISGASGCPIANRNKLRALEIDSAVEKQRAYVANIPASIKIDGVNCPTIGCDGTGHINGTYLTHRSLSGCPTAQGVKRTKYDEDIMLGSSNMSDEMEQAQHNHSHSTTTHHSIKGSHSNISNNNNIDITSCNSMSPASTTNGTSAVVTHHHQLQSPLLPPQPDVTDLQREKAQVELQMLRLKSNINAIEFQLNHNERVSC

Sequence clustering based on sequence similarity using MMseqs2