Basic Information

Insect: Symmerus nobilis
Gene Symbol: L
Assembly: GCA_027564815.1
Location: JANTOP010080659.1:855-18847[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.88 31 5.4 5.8 1 23 3 25 3 25 0.98

2 17 4.6e-07 1.6e-05 25.2 3.1 1 23 31 53 31 53 0.99

3 17 2.1e-05 0.00074 19.9 0.3 1 23 59 81 59 81 0.98

4 17 0.27 9.6 7.0 0.6 3 23 242 263 240 263 0.95

5 17 0.29 10 6.9 0.2 1 23 379 401 379 401 0.95

6 17 0.00025 0.0089 16.5 0.3 1 23 408 430 408 430 0.98

7 17 1.4 49 4.8 0.6 1 23 438 462 438 462 0.89

8 17 0.23 8 7.2 2.2 1 19 467 485 467 490 0.92

9 17 0.016 0.56 10.9 1.0 1 23 497 521 497 521 0.97

10 17 0.012 0.43 11.3 3.7 1 23 557 579 557 580 0.96

11 17 2.3 81 4.1 0.3 1 23 772 796 772 796 0.91

12 17 0.00012 0.0043 17.5 0.4 2 23 805 827 804 827 0.96

13 17 0.014 0.5 11.0 0.1 1 23 833 855 833 855 0.97

14 17 0.069 2.4 8.9 0.8 2 23 863 884 862 884 0.96

15 17 3.4 1.2e+02 3.5 0.8 3 23 1007 1027 1006 1027 0.94

16 17 0.03 1.1 10.0 0.0 1 20 1036 1055 1036 1058 0.95

17 17 0.082 2.9 8.6 0.8 1 23 1065 1088 1065 1088 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.88	31	5.4	5.8	1	23	3	25	3	25	0.98
2	17	4.6e-07	1.6e-05	25.2	3.1	1	23	31	53	31	53	0.99
3	17	2.1e-05	0.00074	19.9	0.3	1	23	59	81	59	81	0.98
4	17	0.27	9.6	7.0	0.6	3	23	242	263	240	263	0.95
5	17	0.29	10	6.9	0.2	1	23	379	401	379	401	0.95
6	17	0.00025	0.0089	16.5	0.3	1	23	408	430	408	430	0.98
7	17	1.4	49	4.8	0.6	1	23	438	462	438	462	0.89
8	17	0.23	8	7.2	2.2	1	19	467	485	467	490	0.92
9	17	0.016	0.56	10.9	1.0	1	23	497	521	497	521	0.97
10	17	0.012	0.43	11.3	3.7	1	23	557	579	557	580	0.96
11	17	2.3	81	4.1	0.3	1	23	772	796	772	796	0.91
12	17	0.00012	0.0043	17.5	0.4	2	23	805	827	804	827	0.96
13	17	0.014	0.5	11.0	0.1	1	23	833	855	833	855	0.97
14	17	0.069	2.4	8.9	0.8	2	23	863	884	862	884	0.96
15	17	3.4	1.2e+02	3.5	0.8	3	23	1007	1027	1006	1027	0.94
16	17	0.03	1.1	10.0	0.0	1	20	1036	1055	1036	1058	0.95
17	17	0.082	2.9	8.6	0.8	1	23	1065	1088	1065	1088	0.92

Sequence Information

Coding Sequence: ATGCCATTTAAATGTGATTACTGTGCACGGTTGTTCAAACATAAAAGATCAAGGGATCGCCACACAAAATTGCATACGGGAGATCGAAGATATCGGTGTCCGCATTGTGAGGCAGCTTTCTCAAGAAGCGATCATTTAAAGATTCACATGAAAACACACGATAATCAGAAACCGTTTCAATGTACGATTTGTAATCGAGGCTATAATACAGCGGCCGCCTTAACATCACACATGCAAAATCATAAGAAACAAGCGGCATTATTGGGAGCTGGTGCTGGATCACAACCACTAAATTATAGTCCACGTTCAACTGGTTCCGCATCAAGTGGTCAAAGTTTAATACATCCATCCCATCCAACACAAAATCCATCGAACCATTACAAACGTAAATACATGTCAACGATATCGATGAAAGGGAACGCCGCCAACAACAACAATAATTTGGAATTTCATGGTCCGATTAAAAGGCAAAATTTATCAATTGTAGGAACCGCCCACCACCATCATCCACCGTCAATGACCAATAATGGGACAGCATCATCGATAAATAATAAATCACCATTGCTATTGTATTGCATGTATTGTACAAAAAATGATTTTCAATCAATCGATCAATTACATATGCATATACAGGCAATGCATTCGGCTGCGCTTACTGTGAGAGAGACGCCCTACCATTCGAACCCCCATCTTCATCCACATCTCAGTCACCTTCAGCTGGCCTGCGAATTTTGTACGATGAAATTCCCCGACATCCCATCAATGTTCCATCACATTCGCCTCACCCACATCGATCGAATCACCAGTCCAAATTCGTACTTCAATAAAATTGCAACCGATTTGTACGGACCAACGAACCGTATAGCGTTCAGTCCAAATGGAGACGAACGAACCCCATACCGATCCATCAAATCGGAATTGAATAGTCCGACCAGTGAACGAGATGAAAAATTATCGAAACCATCGAGCACACCAACGATTATGATCGCCGATCAACCGATTAAAGAGGAAGAGGTTGATGGGGAAGAACGATCGATTGATGAGCAGGATAGTCCAACGGATTTAAGTAAAAAATCACAGATGGAAGGGAGTAAAGCTGGTGACCAGATCCCATCACCAATTAATCGAAATCAATTTTTATGCAATCAATGTAATGCTGCTCTGCCCGATTTCGAAGCGTTTCGTAATCATCTCAAAAATCACTTAAACATCGGACCATCGTACATCTGTCCACATTGTGGCGTTCAATCACCCAACCAATCTGATTACGATCGACACATTATGACCCATTTCCTGATCGTCGATACAACATTCGATTGTTCCATGTGTGAGAATGTCAACTTCCAGAAATCGGATGATCTCCAGAAACATTTACAGGATCAACATGTTCAAACATGTTTCAAATGTTGCCTGTGTTCGGAAGTGTTTGAAACAAAAGGTCAGGTACAAGTACACTGTGCCGTTGCTCATACGGTTGAAGTGAAACAGTATCGGTGTTCGGGATGTGTTATGGAAACATTTAAAACGGAAAAGGAGTTGAAACAACATGTTCGGAGTAGACATCGGATCACCGCTATCGGTACGAATCCATTACAATGTATTTTCTGTCGTACGGTTTGCGGATCCGAATTGGAAATGCATTTCCATTTATCAGCTCACGCACGACAGTATCGATGTCCGACATGTTTCGAAACATTTCATGTCGAATTTCTGTTGGATCGTCATATGGAAACTCATCATGGGTCACCGGGAGCACAAGGTAGTAAACATTCAATGGAATTGAATGGAAATTATCCAACAAACCCATCTGTTCCATTTCCTTATAAAGGAATAAATAATAATAATAATATACTTGATTATCATTACGTTGCAGCCGCAGCAGCTGCTGCGGTTCACGGTGCTGGTTCCCAAGGAAAAGGATCGTTATATGGAAATTTCATTGATCCATCCGTGACACCAAATACAAAGCAAACAGCACCACCGAACCAACCGAAGTTTCCTGCAACCAATTTTCTCTATCCACATTACTACGATTCGATGCCGGGCAAATCCCGATATTTAGATGCGATTCAGGTGGCAAATAAAAATTTCCTTGGCGGGCTGTACGGATCGGGAAGTTCACCGTATGGATCCGGGCCAGTTGAAAGGAAATCATATACGGCAACACAAGGAACATCACCAACCAACGATGATATTCAACGAGTTGCGTCCATCAACCAACAAAAATTAAACGGTATCCGGATGTCTAATCAATATCCAGCAAATCAATCTATTGATCAGTCTCCGGTTAAGGACAACCGGCGAGACACCGGTTTCAGTTGTGGAATATGTGAACGAACGGATTTTAATACGGAAACAGAGGTGCAGACACACCGGAAAATCGTTCATAACGTAAAGACAGGGGTTAGTTTACGATGTGCTTACTGCAATGGAAACTTTCGGTCCAGAAGTGAATTAGAATCCCACATGAAAATGGCACACAATGCAAACGGGAAACATAAATGTTTGATTTGTGATGAGATCTTTCCGTCACCGGCCGTTCTAGCCGAACATAAATTATCCCATTCAAAGGTTGCCGCATCCGGAAAATGTTCCCATTGTTCGTTCACCCTATCAGATGTTACAGCGTTTAAGGCTCACATGATCGATCATAATTCGACGGCTAATGAACTACCGACACAATGTATCTGCTGTCGACAGACATTACATTCTGAATATGAGATTGGATTGCATGCAAAATTCCATACAAATAACCACTCATCTGCAGATAGTTTGGATCATCCAAACTCCTGCGTTCTCTGTTTGGACGTTTTACCCACAAATATTGAAGCGAAAATTTGTGAGAAATGTTTCAAGAAACATAATTTCTCATCGTTAGGAAAGTATCCACCACCACCAATGCCACCACATCTATTCGGTCGGCCACCACCATCTGCAGGACATTACAGCCAATTAACCGATGAATCTGGTGGTTTGTTGATTCCAACGTCAGTTACGATTGGCAGTAAATCGAATCATTGTTACTTGTGTAACAAAACAATCGGAACGGTTCAGAAACTGCAAGAACATTTAATCGAACATTCGTTTGAAGGTGTTGATCGTGGATTTTCATGTTACGTGTGTTCGGCTGTATTCACCGGCCCACAAAGTCTAATCGCTCATATGCCCGAACACGGTCTCCACACAAAACCGTACGATTGCAATAAATGTTCGGAACAATTTTATTTCCGCACCGAAATGGAGAATCATATTTACGGGGAGCATGGTGATGTTGAAACGATCGGTCAAAATTTAAATAATATCGAACCCGTCGAACCGAATCGGGTGGTCGAAACGGAACCGATTAATATTTCAAAACGGATTAAATTAGAAACATCGTCCACTGGTTATGTGGAAAAGAATGTGGATGACGATGAGGAATATATTGAAGTAGAAAAAATGGAAGGAAATCAAGAAACGGATCCGGAACATATTCCAATAAAAACTCCGGATAAGATGAAAGTTGAAAAAGATAGTGAAGTAGAGGATACAGATTAA
Protein Sequence: MPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLGAGAGSQPLNYSPRSTGSASSGQSLIHPSHPTQNPSNHYKRKYMSTISMKGNAANNNNNLEFHGPIKRQNLSIVGTAHHHHPPSMTNNGTASSINNKSPLLLYCMYCTKNDFQSIDQLHMHIQAMHSAALTVRETPYHSNPHLHPHLSHLQLACEFCTMKFPDIPSMFHHIRLTHIDRITSPNSYFNKIATDLYGPTNRIAFSPNGDERTPYRSIKSELNSPTSERDEKLSKPSSTPTIMIADQPIKEEEVDGEERSIDEQDSPTDLSKKSQMEGSKAGDQIPSPINRNQFLCNQCNAALPDFEAFRNHLKNHLNIGPSYICPHCGVQSPNQSDYDRHIMTHFLIVDTTFDCSMCENVNFQKSDDLQKHLQDQHVQTCFKCCLCSEVFETKGQVQVHCAVAHTVEVKQYRCSGCVMETFKTEKELKQHVRSRHRITAIGTNPLQCIFCRTVCGSELEMHFHLSAHARQYRCPTCFETFHVEFLLDRHMETHHGSPGAQGSKHSMELNGNYPTNPSVPFPYKGINNNNNILDYHYVAAAAAAAVHGAGSQGKGSLYGNFIDPSVTPNTKQTAPPNQPKFPATNFLYPHYYDSMPGKSRYLDAIQVANKNFLGGLYGSGSSPYGSGPVERKSYTATQGTSPTNDDIQRVASINQQKLNGIRMSNQYPANQSIDQSPVKDNRRDTGFSCGICERTDFNTETEVQTHRKIVHNVKTGVSLRCAYCNGNFRSRSELESHMKMAHNANGKHKCLICDEIFPSPAVLAEHKLSHSKVAASGKCSHCSFTLSDVTAFKAHMIDHNSTANELPTQCICCRQTLHSEYEIGLHAKFHTNNHSSADSLDHPNSCVLCLDVLPTNIEAKICEKCFKKHNFSSLGKYPPPPMPPHLFGRPPPSAGHYSQLTDESGGLLIPTSVTIGSKSNHCYLCNKTIGTVQKLQEHLIEHSFEGVDRGFSCYVCSAVFTGPQSLIAHMPEHGLHTKPYDCNKCSEQFYFRTEMENHIYGEHGDVETIGQNLNNIEPVEPNRVVETEPINISKRIKLETSSTGYVEKNVDDDEEYIEVEKMEGNQETDPEHIPIKTPDKMKVEKDSEVEDTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -